RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Snap25P60879 206 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cnga2Q62398 664 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 HibadhQ99L13 335 aaKnown RBP12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Krt23Q99PS0 422 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 CpzQ8R4V4 654 aa12.31□□□□□ -0.44
Msh3-202ENSMUST00000185852 Npc1l1Q6T3U4 1333 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 EzrP26040 586 aaKnown RBP12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 MaeaQ4VC33 396 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ptrh1Q8BW00 204 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Gimap7Q8R379 293 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ssr1Q9CY50 286 aaKnown RBP12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Polr2dQ9D7M8 142 aaKnown RBP12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Myoz2Q9JJW5 264 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Med1Q925J9 1575 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Stim1P70302 685 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Nlrp2Q4PLS0 1046 aaKnown RBP12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cyp2j7A0A140T8U1 504 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Slc18a1Q8R090 521 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 CsadQ9DBE0 493 aa12.3□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ampd3O08739 766 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 1810065E05RikQ5NC41 235 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ano2Q8CFW1 1002 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Matr3Q8K310 846 aaKnown RBP12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Gtf2a1Q99PM3 378 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cul5Q9D5V5 780 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Eepd1Q3TGW2 569 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ddx31Q6NZQ2 687 aaKnown RBP12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Smarcc2Q6PDG5 1213 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Nop14Q8R3N1 860 aaKnown RBP12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ccar2Q8VDP4 922 aaKnown RBP12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Gm38392E9Q2A2 434 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cacna2d4Q5RJF7 1116 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 RragbQ6NTA4 374 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Paf1Q8K2T8 535 aa12.29□□□□□ -0.44
Msh3-202ENSMUST00000185852 Tmem131lQ3U3D7 1597 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Sec62Q8BU14 398 aaKnown RBP12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Clic4Q9QYB1 253 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Vmn2r23E9PXI5 849 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Gm20425E9Q035 978 aaKnown RBP12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 SrprbP47758 269 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Kctd1Q5M956 257 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Bag1Q60739 355 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Asic1Q6NXK8 526 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Bbs9Q811G0 885 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Atad2Q8CDM1 1040 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Snapc4Q8BP86 1333 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Cd22P35329 862 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Olfr118Q7TRJ6 321 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Plcd1Q8R3B1 756 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Tmod2Q9JKK7 351 aa12.28□□□□□ -0.44
Msh3-202ENSMUST00000185852 Fam178bQ24JP3 464 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Ctdnep1Q3TP92 244 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Strip1Q8C079 837 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Wdr24Q8CFJ9 790 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Nxf1Q99JX7 618 aaKnown RBP12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Wdr64Q9D565 1086 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 NapaQ9DB05 295 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Syt10Q9R0N4 523 aa12.27□□□□□ -0.44
Msh3-202ENSMUST00000185852 Stx1aO35526 288 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Armc2Q3URY6 854 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 EngaseQ8BX80 734 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Palm3A2TJV2 734 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Fam184aE9PW83 1143 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Eddm13E9Q7F5 164 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Mybl2P48972 704 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Pank2Q3U4S0 443 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Dync1li2Q6PDL0 492 aaKnown RBP12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 Ctdspl2Q8BG15 465 aa12.27□□□□□ -0.45
Msh3-202ENSMUST00000185852 C3P01027 1663 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Ano3A2AHL1 981 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 1700018F24RikB2RW27 314 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Kif22Q3V300 660 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Ttll4Q80UG8 1193 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Map10Q8BJS7 891 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Trmt44Q9D2Q2 713 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Hs6st3Q9QYK4 470 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Slc27a3O88561 667 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Edrf1Q6GQV7 1239 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Zbtb39Q6PDK0 712 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Fez1Q8K0X8 392 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Slit3Q9WVB4 1523 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Sos2Q02384 1333 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 DnttP09838 530 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Pde6aP27664 859 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 PpardP35396 440 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Pde3aQ9Z0X4 1141 aa12.26□□□□□ -0.45
Msh3-202ENSMUST00000185852 Nfxl1E9Q8I7 918 aaKnown RBP12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Tfcp2l1Q3UNW5 479 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Wdr93Q402B2 695 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Afg3l2Q8JZQ2 802 aaKnown RBP12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 OscarQ8VBT3 265 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 EhhadhQ9DBM2 718 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Ccnt1Q9QWV9 724 aaKnown RBP12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Ankrd63A2ARS0 390 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 GnaqP21279 359 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Psmb7P70195 277 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Cdca8Q8BHX3 289 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Nat10Q8K224 1024 aaKnown RBP12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Trmt112Q9DCG9 125 aa12.25□□□□□ -0.45
Msh3-202ENSMUST00000185852 Cxcl11Q9JHH5 100 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms