RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Sstr3P30935 428 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Serpinc1P32261 465 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Fermt3Q8K1B8 665 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Cetn2Q9R1K9 172 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 C87499Q3UX49 493 aa13.08□□□□□ -0.31
Ndc1-204ENSMUST00000139560 EsrrbQ61539 433 aa13.08□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Oxsr1Q6P9R2 527 aa13.08□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Arhgef18Q6P9R4 1021 aa13.08□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Haus2Q9CQS9 234 aa13.08□□□□□ -0.31
Ndc1-204ENSMUST00000139560 ByslO54825 436 aaKnown RBP13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Emilin2Q8K482 1074 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 IqcdQ9D3V1 458 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mrpl12Q9DB15 201 aaKnown RBP13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Krt71Q9R0H5 524 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Nup160Q9Z0W3 1402 aaKnown RBP13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gm5934D3Z4U6 212 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Asic4Q7TNS7 539 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 ParnQ8VDG3 624 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Kif2cQ922S8 721 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Asic2Q925H0 512 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Psrc1Q9D0P7 329 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Pdzd9Q9D9M4 266 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Foxo3Q9WVH4 672 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Zfp597E9Q6S0 419 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Krt79Q8VED5 531 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tekt2Q922G7 430 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mxra7Q9CZH7 178 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Fam84aQ9D650 292 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hs6st3Q9QYK4 470 aa13.08□□□□□ -0.32
Ndc1-204ENSMUST00000139560 NpatQ8BMA5 1420 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 PparaP23204 468 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ncoa7Q6DFV7 943 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Taco1Q8K0Z7 294 aaKnown RBP13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Calm1P0DP26 149 aaKnown RBP13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Calm2P0DP27 149 aaKnown RBP13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Calm3P0DP28 149 aaKnown RBP13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Spata16Q8C636 571 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cyp2ab1S4R196 498 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Abcc4E9Q236 1325 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 1700018F24RikB2RW27 314 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Arhgef1Q61210 920 aaKnown RBP13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cep19Q9CQA8 163 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Disp3A3KFU9 1347 aa13.07□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Chl1P70232 1209 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Lrrc43Q3V0L5 667 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Lrsam1Q80ZI6 727 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Dnaaf2Q8BPI1 814 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Eno4Q8C042 619 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 SfpqQ8VIJ6 699 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mybpc2Q5XKE0 1136 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Krt77Q6IFZ6 572 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Zfp113Q8C689 439 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hs2st1Q8R3H7 356 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cfap53Q9D439 514 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tacc2Q9JJG0 1149 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Adgrl2Q8JZZ7 1487 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Kif21aQ9QXL2 1672 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Stk36Q69ZM6 1316 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Talpid3E9PV87 1520 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Skor2A7M7C7 1008 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Art2bO35975 289 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Pak1O88643 545 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gna15P30678 374 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Opa1P58281 960 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Large2Q5XPT3 690 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Olfm5Q8BU90 496 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hgh1Q8C3I8 393 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Dis3l2Q8CI75 870 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Xrcc4Q924T3 326 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 AticQ9CWJ9 592 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tnip1Q9WUU8 647 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Magi2Q9WVQ1 1275 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Scaf11E9PZM7 1456 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 A0A1W2P6Q8 802 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gm9048A0A1W2P7H4 802 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 A0A1W2P7S8 802 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 A0A1W2P7Z8 802 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gm9046A0A1W2P855 802 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Skap2Q3UND0 358 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Lrrc36Q3V0M2 755 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Clul1Q3ZRW6 464 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cdc5lQ6A068 802 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ncaph2Q8BSP2 607 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cadps2Q8BYR5 1297 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Rab44Q8CB87 725 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ttc27Q8CD92 847 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Sar1bQ9CQC9 198 aa13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Edc4Q3UJB9 1406 aaKnown RBP13.06□□□□□ -0.32
Ndc1-204ENSMUST00000139560 TsksO54887 585 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Xrcc6P23475 608 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gm5935Q497S0 212 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Oxr1Q4KMM3 866 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gm12185Q5NCB2 835 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Stk38lQ7TSE6 464 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Haus1Q8BHX1 278 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Slc35g1Q8BY79 368 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Supt6hQ62383 1726 aaKnown RBP13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 GnaqP21279 359 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Eif4a1P60843 406 aaKnown RBP13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hmgb1P63158 215 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms