RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Senp5Q6NXL6 749 aa16.85■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Rbm43Q99J64 343 aa16.85■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Rai14Q9EP71 979 aaKnown RBP16.85■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 S1pr4Q9Z0L1 386 aa16.85■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Tsc2Q61037 1814 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Bace1P56818 501 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Stac3Q8BZ71 360 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Tjap1Q9DCD5 539 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Tmod2Q9JKK7 351 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Arih1Q9Z1K5 555 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 XdhQ00519 1335 aa16.84■□□□□ 0.29
Ccdc171-204ENSMUST00000126429 Itgb7P26011 806 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Eif5P59325 429 aaKnown RBP16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fam178bQ24JP3 464 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Prpf38aQ4FK66 312 aaKnown RBP16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ctr9Q62018 1173 aaKnown RBP16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Pxylp1Q8BHA9 480 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Phf20l1Q8CCJ9 1013 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Erc1Q99MI1 1120 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 EhhadhQ9DBM2 718 aa16.83■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ppp2r3aB2RXC8 1150 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ppfia1B2RXQ2 1266 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Pdia3P27773 505 aaKnown RBP16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Nkx1-2P42580 305 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Slain1Q68FF7 579 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Secisbp2lQ6A098 1086 aaKnown RBP16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 HelbQ6NVF4 1074 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ddx55Q6ZPL9 600 aaKnown RBP16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 C8aQ8K182 587 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ccdc39Q9D5Y1 937 aa16.82■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Map7O88735 730 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Gnat2P50149 354 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Mmp20P57748 482 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Tbc1d9Q3UYK3 1264 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ppm1gQ61074 542 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 KhnynQ80U38 671 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Sulf1Q8K007 870 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 HibadhQ99L13 335 aaKnown RBP16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 CenppQ9CZ92 286 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 KnstrnQ9D9Z1 312 aaKnown RBP16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Nek4Q9Z1J2 792 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Phlpp2Q8BXA7 1320 aa16.81■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Hspd1P63038 573 aaKnown RBP16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ddx49Q4FZF3 480 aaKnown RBP16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Stxbp2Q64324 593 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ireb2Q811J3 963 aaKnown RBP16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Spata21Q8BHW6 681 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Nek11Q8C0Q4 628 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Alx1Q8C8B0 326 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 StrbpQ91WM1 672 aaKnown RBP16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Snapc2Q91XA5 359 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 GrapQ9CX99 217 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Bcs1lQ9CZP5 418 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Dynll2Q9D0M5 89 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ak7Q9D2H2 614 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Klrc1Q9Z202 244 aa16.8■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Il7P10168 154 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Map2k1P31938 393 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Irx3P81067 507 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Spata5Q3UMC0 893 aaKnown RBP16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fxr1Q61584 677 aaKnown RBP16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fam196bQ6GQV1 535 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Tex2Q6ZPJ0 1128 aaKnown RBP16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Rassf10Q8BL43 508 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Slc4a7Q8BTY2 1034 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Lca5lQ8C0X0 741 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 AidaQ8C4Q6 305 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Adam1bQ8R534 806 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Snap47Q8R570 413 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fam205a1D3YZF6 1314 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Pitpnm2Q6ZPQ6 1335 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Myh7Q91Z83 1935 aa16.79■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Skint7A7XV04 395 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fam186bD3Z420 943 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Usp17ldG5E8G2 545 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Usp17lcG5E8I7 545 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Serpinb2P12388 415 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Traf5P70191 558 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Sox10Q04888 466 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ncf1Q09014 390 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ncbp1Q3UYV9 790 aaKnown RBP16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Slc9c1Q6UJY2 1175 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Ppp1r11Q8K1L5 131 aa16.78■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Plekhg2Q6KAU7 1340 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Hsp90b1P08113 802 aaKnown RBP16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 VrtnQ3SYK4 740 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Aak1Q3UHJ0 959 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Gprin1Q3UNH4 932 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Zfp953Q3UPV7 304 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Acap3Q6NXL5 833 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Cnksr2Q80YA9 1032 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Fam83aQ8K2P2 436 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Gimap3Q99MI6 301 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Htra3Q9D236 459 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 CsadQ9DBE0 493 aa16.77■□□□□ 0.28
Ccdc171-204ENSMUST00000126429 Plxnb2B2RXS4 1842 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Pagr1bF6V0H0 108 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Vmn2r68L7N2B3 851 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Mmp10O55123 476 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 MecomP14404 1042 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms