RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Trim27Q62158 513 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Ltv1Q6NSQ7 470 aaKnown RBP14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Adck5Q80V03 582 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Slc45a1Q8BIV7 751 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Sp8Q8BMJ8 486 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 H2-Q4Q8HWB2 354 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 MyocdQ8VIM5 935 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Pagr1aQ99L02 253 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Pnpla6Q3TRM4 1355 aa14.85□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Has3O08650 554 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 FlgP11088 336 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Senp6Q6P7W0 1132 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Olfm5Q8BU90 496 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Tut1Q8R3F9 869 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Gpsm2Q8VDU0 679 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Plxnb2B2RXS4 1842 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Med23Q80YQ2 1367 aa14.84□□□□□ -0.03
Ccdc28b-202ENSMUST00000106035 Tnni2P13412 182 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ly6dP35459 127 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 CtshP49935 333 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Eif5bQ05D44 1216 aaKnown RBP14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Slc16a10Q3U9N9 512 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ncbp1Q3UYV9 790 aaKnown RBP14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Sv2cQ69ZS6 727 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Myl6bQ8CI43 207 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Itm2cQ91VK4 269 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Lysmd1Q9D0E3 226 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Sept12Q9D451 317 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 CsadQ9DBE0 493 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Usp31E9Q6Y8 1344 aa14.83□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Krt24A1L317 512 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 B020004C17RikJ3QP07 232 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Cyp2b10P12791 500 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ccnd3P30282 292 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Dynll1P63168 89 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 D630036H23RikQ3UQD6 204 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Zbtb45Q52KG4 520 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ppp1r26Q6A025 1163 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Edrf1Q6GQV7 1239 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Eif2s2Q99L45 331 aaKnown RBP14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Tjap1Q9DCD5 539 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Frmpd4A2AFR3 1320 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Aox3G3X982 1335 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Myh14Q6URW6 2000 aa14.82□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 NesQ6P5H2 1864 aaKnown RBP14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Duxf3A0A0N4SV92 674 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Hap1O35668 628 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 DnttP09838 530 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Irf5P56477 497 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ncf1Q09014 390 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Fam178bQ24JP3 464 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Fam228bQ497Q6 232 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Dcaf15Q6PFH3 600 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Golim4Q8BXA1 655 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Leng1Q9DB98 261 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 IcoslgQ9JHJ8 322 aa14.81□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Gm43951A0A0N4SUT6 962 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Tbc1d8bA3KGB4 1114 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Lamp1P11438 406 aaKnown RBP14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 NefhP19246 1090 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Specc1Q5SXY1 1067 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Usp33Q8R5K2 909 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ppp4r3bQ922R5 820 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Styxl1Q9DAR2 321 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Myh2G3UW82 1942 aa14.8□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Atg4a-psA0A0G2JFS9 396 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Pus7B7ZNL8 666 aaKnown RBP14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 ThbdP15306 577 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Eps15P42567 897 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Clul1Q3ZRW6 464 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Prpf38aQ4FK66 312 aaKnown RBP14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ccdc88aQ5SNZ0 1873 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Ces5aQ6AW46 575 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Tex2Q6ZPJ0 1128 aaKnown RBP14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Atg4aQ8C9S8 396 aa14.79□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Col2a1P28481 1487 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 SynrgQ5SV85 1306 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Rbbp8nlA2ABX0 614 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Mms22lB1AUR6 1238 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 AampJ3QN89 436 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Gjb1P28230 283 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Sema3eP70275 775 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Olfm4Q3UZZ4 505 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Mum1l1Q4VA55 681 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Nop58Q6DFW4 536 aaKnown RBP14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Lmod1Q8BVA4 595 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Fam155aQ8CCS2 467 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Acot3Q9QYR7 432 aa14.78□□□□□ -0.04
Ccdc28b-202ENSMUST00000106035 Fam186bD3Z420 943 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Grm1P97772 1199 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 SelpQ01102 768 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Ppm1jQ149T7 507 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Pramel6Q810Y9 485 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Smarca5Q91ZW3 1051 aaKnown RBP14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Traf7Q922B6 594 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 FanclQ9CR14 375 aa14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Rai14Q9EP71 979 aaKnown RBP14.77□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Nck2O55033 380 aa14.76□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Pdlim7Q3TJD7 457 aa14.76□□□□□ -0.05
Ccdc28b-202ENSMUST00000106035 Wdr70Q3TWF6 657 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms