RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Nfat5Q9WV30 1534 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cyp3a57D3YYZ0 503 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Rsph10bE9PYQ0 876 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ppp1r21Q3TDD9 780 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Map9Q3TRR0 646 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 IqcgQ80W32 419 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ubac1Q8VDI7 409 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Sos2Q02384 1333 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cdk4P30285 303 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Exosc10P56960 887 aaKnown RBP11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Esco1Q69Z69 843 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Phldb2Q8K1N2 1249 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Nod2Q8K3Z0 1020 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Kri1Q8VDQ9 704 aaKnown RBP11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 IcoslgQ9JHJ8 322 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Hip1rQ9JKY5 1068 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Mon2Q80TL7 1715 aa11.09□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ugt1a6bK9J7B2 531 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Rad23bP54728 416 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cnga2Q62398 664 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ugt1a6Q64435 531 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ugt1a7cQ6ZQM8 531 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Tbc1d5Q80XQ2 815 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Popdc2Q9ES82 367 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Arap3Q8R5G7 1538 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Trpm3Q5F4S9 1721 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cyp2d34L7N463 504 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Nap1l1P28656 391 aaKnown RBP11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Slfnl1Q8BHW9 410 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Kiaa1524Q8BWY9 907 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Eaf2Q91ZD6 262 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pold4Q9CWP8 107 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 CenphQ9QYM8 241 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 AmfrQ9R049 643 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Als2Q920R0 1651 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Btn2a2A4QPC6 514 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ccdc121E9Q6D3 323 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Akr1c19G3X9Y6 323 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Zbtb7aO88939 569 aaKnown RBP11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 IntuQ059U7 942 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Specc1lQ2KN98 1118 aaKnown RBP11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ddb1Q3U1J4 1140 aaKnown RBP11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Rnf41Q8BH75 317 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 ParvgQ9ERD8 331 aa11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Mrvi1Q9WUX5 899 aaKnown RBP11.08□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pald1P70261 859 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Atp8a2P98200 1148 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 SnrkQ8VDU5 748 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Psrc1Q9D0P7 329 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Rai14Q9EP71 979 aaKnown RBP11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Sorbs3Q9R1Z8 733 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Atp1a4Q9WV27 1032 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Zc3h12cQ5DTV4 884 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Sik1Q60670 779 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pde1cQ64338 706 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Fbxo41Q6NS60 873 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 MbipQ99LQ1 341 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cyp19a1P28649 503 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Panx2Q6IMP4 677 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Tacc1Q6Y685 774 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ppp2r2cQ8BG02 447 aa11.07□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Slc7a3P70423 618 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cnnm2Q3TWN3 875 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Bsdc1Q80Y55 427 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Sptlc3Q8BG54 563 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Smc1bQ920F6 1248 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Trim59Q922Y2 403 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Sept12Q9D451 317 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Klhl34A2AI76 644 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pde6aP27664 859 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 SsbP32067 415 aaKnown RBP11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Mdh1bQ5F204 500 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ranbp6Q8BIV3 1105 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ciao1Q99KN2 339 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Homer1Q9Z2Y3 366 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pde8bE9Q4S1 865 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 RubcnlQ3TD16 648 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Exoc8Q6PGF7 716 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Slc13a4Q8BZ82 625 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ddx41Q91VN6 622 aaKnown RBP11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ehd4Q9EQP2 541 aa11.06□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Dnai2A2AC93 623 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Prr16A3KMN5 304 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Snrpa1P57784 255 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Anks1aP59672 1150 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 March6Q6ZQ89 909 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Nek9Q8K1R7 984 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ces1dQ8VCT4 565 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Odf2A3KGV1 830 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Mapkapk5O54992 473 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Prl3d1P18121 224 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Kif2aP28740 705 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Capza3P70190 299 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cyp24a1Q64441 514 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Rnf187Q8BFX1 236 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ppfibp1Q8C8U0 969 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 ChmQ9QXG2 665 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Grin2dQ03391 1323 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pafah1b1P63005 410 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cdcp1Q5U462 833 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms