RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Zbtb12Q9Z150 459 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Arhgap18Q8K0Q5 663 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 HscbQ8K3A0 234 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Tbc1d7Q9D0K0 293 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gm10563F6WIE4 79 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cep57Q8CEE0 500 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccdc7Q9D541 371 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Krt71Q9R0H5 524 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Lonp1Q8CGK3 949 aaKnown RBP11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gtpbp10Q8K013 366 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Tbc1d5Q80XQ2 815 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Maml3D4QGC2 1135 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Asic1Q6NXK8 526 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cdc23Q8BGZ4 597 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 IntuQ059U7 942 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Nsfl1cQ9CZ44 370 aaKnown RBP11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Myd88P22366 296 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Akr1b8P45377 316 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Grm8P47743 908 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Tcp11l1Q8BTG3 509 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Terf2ipQ91VL8 393 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 WtapQ9ER69 396 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 SpertQ32MG2 446 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Zbtb16Q3UQ17 673 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccpg1Q640L3 753 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Dnaaf2Q8BPI1 814 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ppfia2Q8BSS9 1257 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ddx54Q8K4L0 874 aaKnown RBP11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gm5936A2BG95 728 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gm5640A3KG49 728 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Kif2cQ922S8 721 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Tuft1O08970 390 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Nek11Q8C0Q4 628 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Pde5aQ8CG03 865 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 PdclQ9DBX2 301 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Plekho1Q9JIY0 408 aa11.92□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Kifc2O08672 792 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Stmn1P54227 149 aaKnown RBP11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Fam133bQ9CVI2 245 aaKnown RBP11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Arhgef40Q3UPH7 1517 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Izumo3A6PWV3 263 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Atp2b3Q0VF55 1220 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rassf6Q80UQ2 353 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Znf365Q8BG89 408 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rint1Q8BZ36 792 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Kif17Q99PW8 1038 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Mum1l1Q4VA55 681 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Wdhd1P59328 1117 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Dact3Q0PHV7 610 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Zrsr1Q64707 428 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Oxsr1Q6P9R2 527 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gbp5Q8CFB4 590 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cul5Q9D5V5 780 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 SufuQ9Z0P7 484 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Samsn1P57725 372 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Lrriq3Q14DL3 633 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Csrnp2Q8BGQ2 534 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cnot6lQ8VEG6 555 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Abca16E9PWJ7 1678 aa11.91□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Prr29B1ARI9 187 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Zscan18E9PUD6 809 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Atp6v0a2P15920 856 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 F2rP30558 430 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Usp37Q8C0R0 979 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Klhl20Q8VCK5 604 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Adamts12Q811B3 1600 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Itsn2Q9Z0R6 1659 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccdc13D3YV10 709 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 SfswapQ3USH5 945 aaKnown RBP11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cd209bQ8CJ91 325 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Pacsin2Q9WVE8 486 aaKnown RBP11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Stk10O55098 966 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Pak1O88643 545 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 SbdsP70122 250 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Triml1Q8BVP1 470 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gdap1l1Q8VE33 370 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Znf394Q9Z1D9 521 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rlbp1Q9Z275 317 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Uggt2E9Q4X2 1504 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Apol10bG3X9K7 334 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Mcm10Q0VBD2 885 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Hecw1Q8K4P8 1604 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gm5935Q497S0 212 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 PxdnQ3UQ28 1475 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 MarcksP26645 309 aaKnown RBP11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Fam160b2Q80YR2 744 aa11.9□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Tcerg1lQ3B807 590 aa11.9□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Gm2030D3Z7C4 212 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Psmc4P54775 418 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Ccdc113Q8C5T8 377 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Stk36Q69ZM6 1316 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Lmod1Q8BVA4 595 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Tceanc2Q8R2M0 207 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Atp2a1Q8R429 994 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Pde6cQ91ZQ1 861 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Csrnp1P59054 583 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fermt1P59113 677 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Rtn1Q8K0T0 780 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Nup58Q8R332 587 aa11.89□□□□□ -0.51
Nipbl-201ENSMUST00000052965 Fermt2Q8CIB5 680 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms