RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Cd209bQ8CJ91 325 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Stag1Q9D3E6 1258 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Cnpy3Q9DAU1 276 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Sil1Q9EPK6 465 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Magi2Q9WVQ1 1275 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Pard3Q99NH2 1333 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Cdc27A2A6Q5 825 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Serpinb6bO08804 377 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Anxa1P10107 346 aaKnown RBP18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Gnat2P50149 354 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Cyp7b1Q60991 507 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Tc2nQ91XT6 489 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Krt23Q99PS0 422 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Cbx6Q9DBY5 414 aa18.45■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Tbc1d8bA3KGB4 1114 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Bin2D3Z6Q9 489 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Uri1Q3TLD5 531 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Igflr1Q3U4N7 345 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Anks1bQ8BIZ1 1259 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pnpla2Q8BJ56 486 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Nop9Q8BMC4 636 aaKnown RBP18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Amigo3Q8C2S7 508 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Vps53Q8CCB4 832 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Lrrc2Q8VDB8 371 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pcdhgc5Q91XW9 944 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Tubgcp2Q921G8 905 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Ccdc39Q9D5Y1 937 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Lmod3E9QA62 571 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Trim34bJ3QNR8 485 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Kif3cO35066 796 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Cd3dP04235 173 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pla2g4bP0C871 782 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Adssl1P28650 457 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pola2P33611 600 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Nek1P51954 1203 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 PcQ05920 1178 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Emc10Q3TAS6 258 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Bag1Q60739 355 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Ppp2r5bQ6PD28 497 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 LarsQ8BMJ2 1178 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Ankk1Q8BZ25 745 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Smc2Q8CG48 1191 aaKnown RBP18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Rtn1Q8K0T0 780 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Vps18Q8R307 973 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Mroh6V9GX81 722 aa18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Myh6Q02566 1938 aaKnown RBP18.44■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 NapbP28663 298 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Krt39Q6IFX4 482 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Znf532Q6NXK2 1036 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Fchsd1Q6PFY1 688 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Nat10Q8K224 1024 aaKnown RBP18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Ces1dQ8VCT4 565 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Sept12Q9D451 317 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Klhl40Q9D783 621 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Plekho1Q9JIY0 408 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Cdhr2E9Q7P9 1308 aa18.43■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Rsrc2A2RTL5 376 aaKnown RBP18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Sh3bp1P55194 680 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Kiaa1468Q148V7 1216 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Nyap1Q6PFX7 833 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Maats1Q8BRC6 783 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pde5aQ8CG03 865 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Nek9Q8K1R7 984 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Gnl2Q99LH1 728 aaKnown RBP18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 AatfQ9JKX4 526 aaKnown RBP18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Myh3P13541 1940 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pde4dQ01063 747 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Ccnl1Q52KE7 532 aaKnown RBP18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 BcanQ61361 883 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Arl8aQ8VEH3 186 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Baiap2l1Q9DBJ3 514 aa18.42■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Kcnh4A2A5F7 1018 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Calcoco2A2A6M5 331 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Speer4dL7N216 212 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Diaph1O08808 1255 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Dpf2Q61103 391 aaKnown RBP18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Phf20l1Q8CCJ9 1013 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Rbm43Q99J64 343 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Tbc1d7Q9D0K0 293 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 FliiQ9JJ28 1271 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Scn11aQ9R053 1765 aa18.41■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pbx1P41778 430 aa18.4■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Adam1aQ60813 791 aa18.4■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Q8CEZ4 452 aa18.4■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Eif4enif1Q9EST3 983 aaKnown RBP18.4■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 AfdnQ9QZQ1 1820 aaKnown RBP18.4■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Tpm3-rs7D3Z2H9 248 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Pla2g4fQ50L41 855 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Rbm12b2Q66JV4 834 aaKnown RBP18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Adck2Q6NSR3 617 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Rnf41Q8BH75 317 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 9230110C19RikQ8CC70 267 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Fam114a1Q9D281 569 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Polr2dQ9D7M8 142 aaKnown RBP18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 WtapQ9ER69 396 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Hic2Q9JLZ6 619 aaKnown RBP18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 Stk39Q9Z1W9 556 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 CluhQ5SW19 1315 aa18.39■□□□□ 0.54
Ttc39b-202ENSMUST00000048274 4931408C20RikE9PWP9 1381 aa18.39■□□□□ 0.53
Ttc39b-202ENSMUST00000048274 Trap1aP19473 224 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms