RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Tut1Q8R3F9 869 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Bap1Q99PU7 728 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ccdc47Q9D024 483 aaKnown RBP10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Zfp831A2ADM8 1628 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Lbhd1A0A087WPA0 259 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 1700003F12RikA2AKE5 210 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Stx8O88983 236 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Il7P10168 154 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 VrtnQ3SYK4 740 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Usp50Q6P8X6 390 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Hirip3Q8BLH7 601 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Btaf1E9QAE3 1848 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tcof1O08784 1320 aaKnown RBP10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Pnpla6Q3TRM4 1355 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Prr16A3KMN5 304 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 CrkQ64010 304 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tekt3Q6X6Z7 490 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Slc44a1Q6X893 653 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 U2af1l4Q8BGJ9 220 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ptrh1Q8BW00 204 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tpcn2Q8BWC0 731 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 WdpcpQ8C456 722 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rbm19Q8R3C6 952 aaKnown RBP10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ndufv1Q91YT0 464 aa10.19□□□□□ -0.78
Trim39-201ENSMUST00000042717 KhnynQ80U38 671 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Terb1Q8C0V1 768 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ipo4Q8VI75 1082 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 HibadhQ99L13 335 aaKnown RBP10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ces1aE9PYP1 563 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Gadd45bP22339 160 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tgfb2P27090 414 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Znf667Q2TL60 609 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 ErmnQ5EBJ4 281 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 QarsQ8BML9 775 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 PtmsQ9D0J8 101 aaKnown RBP10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Sept14Q9DA97 430 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ano3A2AHL1 981 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Nedd4P46935 887 aaKnown RBP10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ppp4cP97470 307 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ubxn2bQ0KL01 331 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Fam196bQ6GQV1 535 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ccp110Q7TSH4 1004 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Xrcc4Q924T3 326 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 NaspQ99MD9 773 aaKnown RBP10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Pde3aQ9Z0X4 1141 aa10.18□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tm4sf1Q64302 202 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 SpidrQ8BGX7 933 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ano1Q8BHY3 960 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Hps6Q8BLY7 805 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Mrpl44Q9CY73 333 aaKnown RBP10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Flt1P35969 1333 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Psmd14O35593 310 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Eif6O55135 245 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Eef2P58252 858 aaKnown RBP10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Pus7lQ8CE46 702 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Bola3Q8CEI1 110 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 DpydQ8CHR6 1025 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Terf2ipQ91VL8 393 aa10.17□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ildr2B5TVM2 661 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Fam178bQ24JP3 464 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Llgl2Q3TJ91 1027 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rc3h1Q4VGL6 1130 aaKnown RBP10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Taok2Q6ZQ29 1240 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rbm28Q8CGC6 750 aaKnown RBP10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Kcnn1Q9EQR3 537 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Zbtb22Q9Z0G7 638 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Chd5A2A8L1 1946 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Phrf1A6H619 1682 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 1700013D24RikQ0P521 120 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cnnm3Q32NY4 713 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ubash3aQ3V3E1 624 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 DaglaQ6WQJ1 1044 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 DlatQ8BMF4 642 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tomm22Q9CPQ3 142 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Pik3ap1Q9EQ32 811 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Clip2Q9Z0H8 1047 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Frmpd3A0A140LIW3 1774 aa10.16□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cplx2P84086 134 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 4933416C03RikQ3V063 378 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cep131Q62036 1060 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cnpy3Q9DAU1 276 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Aox1O54754 1333 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Plekhg2Q6KAU7 1340 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rgs9O54828 675 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 CpdO89001 1377 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ftl1P29391 183 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 CebpaP53566 359 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ces3aQ63880 571 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ccdc82Q6PG04 518 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Zfp113Q8C689 439 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cdk8Q8R3L8 464 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Atxn7Q8R4I1 867 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ces3bQ8VCU1 571 aa10.15□□□□□ -0.78
Trim39-201ENSMUST00000042717 Nrxn2E9Q7X7 1710 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gm20425E9Q035 978 aaKnown RBP10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 D1Pas1P16381 660 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ptpn12P35831 775 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 SrprbP47758 269 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 Eya3P97480 510 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 Eme2Q56A04 373 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms