RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Psma5Q9Z2U1 241 aaKnown RBP10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ccdc170D3YXL0 722 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tubb5P99024 444 aaKnown RBP10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Map2k2Q63932 401 aa10.41□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Uspl1Q3ULM6 1089 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Brsk2Q69Z98 735 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Lmod1Q8BVA4 595 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Aldh5a1Q8BWF0 523 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Rbm41Q8JZV4 413 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Txndc9Q9CQ79 226 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Txnrd1Q9JMH6 613 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Magi2Q9WVQ1 1275 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 ZfxP17012 799 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ppp4r3aQ6P2K6 820 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Trim37Q6PCX9 961 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 SrlQ7TQ48 910 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Znf131Q8K3J5 619 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ccdc70Q9D9B0 223 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cacna2d3Q9Z1L5 1091 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ccdc6D3YZP9 469 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Alox15P39654 663 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ubash3aQ3V3E1 624 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Chmp2bQ8BJF9 213 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Snrnp27Q8K194 155 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Srgap1Q91Z69 1062 aa10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Rprd2Q6NXI6 1469 aaKnown RBP10.4□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Dync1i2O88487 612 aaKnown RBP10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gspt2Q149F3 632 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Atp1a3Q6PIC6 1013 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ankzf1Q80UU1 748 aaKnown RBP10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cct8l1Q80YT3 562 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cdk19Q8BWD8 501 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ssh3Q8K330 649 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 NapgQ9CWZ7 312 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cyth1Q9QX11 398 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Nphp1Q9QY53 687 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Itgb1bp2Q9R000 350 aa10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Pdcd6ipQ9WU78 869 aaKnown RBP10.4□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Clec11aO88200 328 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Fchsd2Q3USJ8 740 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Luc7l3Q5SUF2 432 aaKnown RBP10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Spag7Q7TNE3 227 aaKnown RBP10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Rps6ka6Q7TPS0 764 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Plekhm2Q80TQ5 1018 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Prpf40bQ80W14 870 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Rnf168Q80XJ2 565 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Tlcd1Q99JT6 247 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Card14Q99KF0 999 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Capn12Q9ER56 720 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Hoxa2P31245 372 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Nlrp4aQ8BU40 982 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Nek9Q8K1R7 984 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Aldh1l1Q8R0Y6 902 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Bzw2Q91VK1 419 aaKnown RBP10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Tsnaxip1Q99P25 704 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Kdm5aQ3UXZ9 1690 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gbp6A0A0G2JDV3 611 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Vwa3bJ9JI28 736 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gm43302L7N1X8 611 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ezh1P70351 747 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Mks1Q5SW45 561 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ift122Q6NWV3 1182 aa10.39□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Klhl33G3UW92 533 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 InhbeO08717 350 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Opa1P58281 960 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Vsnl1P62761 191 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ncapg2Q6DFV1 1138 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Arfgap2Q99K28 520 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Col18a1P39061 1774 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 TufmQ8BFR5 452 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Hgh1Q8C3I8 393 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cd209bQ8CJ91 325 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Lrrc59Q922Q8 307 aaKnown RBP10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ophn1Q99J31 802 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ankrd1Q9CR42 319 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Atp6v1g1Q9CR51 118 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Bloc1s2Q9CWG9 143 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Styxl1Q9DAR2 321 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Zranb2Q9R020 330 aaKnown RBP10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ubn2Q80WC1 1314 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Clcn6O35454 870 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Akap2O54931 893 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cdr2P97817 455 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc84Q4VA36 332 aaKnown RBP10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Iffo1Q8BXL9 562 aa10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 NemfQ8CCP0 1064 aaKnown RBP10.38□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ccdc110Q3V125 848 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Sgsm2Q80U12 1005 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Cdc23Q8BGZ4 597 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Prune1Q8BIW1 454 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Clec4gQ8BNX1 294 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Ttc12Q8BW49 704 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 MmadhcQ99LS1 296 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gm44G3UW88 330 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Anks1aP59672 1150 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 LbrQ3U9G9 626 aaKnown RBP10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Gsdma3Q5Y4Y6 464 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Bicd1Q8BR07 835 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Slc35g1Q8BY79 368 aa10.37□□□□□ -0.75
Ctc1-201ENSMUST00000021278 Dtnbp1Q91WZ8 352 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms