RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeastyeast

Gene MSS18, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS18YPR134W DAN4P47179 1161 aa7.38□□□□□ -1.23
MSS18YPR134W JIP4Q03361 876 aa7.38□□□□□ -1.23
MSS18YPR134W GRE2Q12068 342 aaKnown RBP7.38□□□□□ -1.23
MSS18YPR134W SAP30P38429 201 aa7.37□□□□□ -1.23
MSS18YPR134W EDS1P38073 919 aa7.36□□□□□ -1.23
MSS18YPR134W PTC4P38089 393 aa7.35□□□□□ -1.23
MSS18YPR134W PTC3P34221 468 aaKnown RBP7.33□□□□□ -1.24
MSS18YPR134W ATH1P48016 1211 aa7.33□□□□□ -1.24
MSS18YPR134W COQ8P27697 501 aa7.32□□□□□ -1.24
MSS18YPR134W YDL129WQ07555 291 aa7.3□□□□□ -1.24
MSS18YPR134W GUT1P32190 709 aa7.28□□□□□ -1.24
MSS18YPR134W PML39Q03760 334 aa7.25□□□□□ -1.25
MSS18YPR134W CHL1P22516 861 aaPredicted RBP7.2□□□□□ -1.26
MSS18YPR134W SOL3P38858 249 aa7.2□□□□□ -1.26
MSS18YPR134W YDR344CQ05510 147 aa7.2□□□□□ -1.26
MSS18YPR134W PRE3P38624 215 aa7.19□□□□□ -1.26
MSS18YPR134W MID1P41821 548 aa7.19□□□□□ -1.26
MSS18YPR134W NST1P53935 1240 aa7.18□□□□□ -1.26
MSS18YPR134W NOP53Q12080 455 aaKnown RBP7.18□□□□□ -1.26
MSS18YPR134W ELP4Q02884 456 aaKnown RBP7.15□□□□□ -1.26
MSS18YPR134W BCK2P33306 851 aa7.14□□□□□ -1.27
MSS18YPR134W MPH3P0CE00 602 aa7.12□□□□□ -1.27
MSS18YPR134W ILV3P39522 585 aaKnown RBP7.12□□□□□ -1.27
MSS18YPR134W YGR273CP53329 174 aa7.11□□□□□ -1.27
MSS18YPR134W PEX29Q03370 554 aa7.11□□□□□ -1.27
MSS18YPR134W AI4P03878 556 aa7.1□□□□□ -1.27
MSS18YPR134W VRP1P37370 817 aa7.07□□□□□ -1.28
MSS18YPR134W SET1P38827 1080 aaKnown RBP7.07□□□□□ -1.28
MSS18YPR134W ARH1P48360 493 aa7.06□□□□□ -1.28
MSS18YPR134W SLI15P38283 698 aa7□□□□□ -1.29
MSS18YPR134W MPC54Q08550 464 aa7□□□□□ -1.29
MSS18YPR134W SPT23P35210 1082 aa6.99□□□□□ -1.29
MSS18YPR134W HAP5Q02516 242 aa6.99□□□□□ -1.29
MSS18YPR134W KEX1P09620 729 aa6.98□□□□□ -1.29
MSS18YPR134W XDJ1P39102 459 aa6.96□□□□□ -1.3
MSS18YPR134W VHR2P40041 505 aa6.96□□□□□ -1.3
MSS18YPR134W NMA111P53920 997 aa6.96□□□□□ -1.3
MSS18YPR134W IFH1P39520 1085 aa6.94□□□□□ -1.3
MSS18YPR134W DPL1Q05567 589 aa6.94□□□□□ -1.3
MSS18YPR134W UBP14P38237 781 aaKnown RBP6.92□□□□□ -1.3
MSS18YPR134W PTC2P39966 464 aaKnown RBP6.92□□□□□ -1.3
MSS18YPR134W BNI4P53858 892 aa6.92□□□□□ -1.3
MSS18YPR134W YLR326WQ06170 240 aaKnown RBP6.92□□□□□ -1.3
MSS18YPR134W CDC73Q06697 393 aa6.91□□□□□ -1.3
MSS18YPR134W PCS60P38137 543 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31 RIP-Chip
MSS18YPR134W RAD54P32863 898 aa6.87□□□□□ -1.31
MSS18YPR134W DPS1P04802 557 aaKnown RBP6.86□□□□□ -1.31
MSS18YPR134W YML082WQ04533 649 aaKnown RBP6.86□□□□□ -1.31
MSS18YPR134W ISU2Q12056 156 aa6.85□□□□□ -1.31
MSS18YPR134W RPP1BP10622 106 aaKnown RBP6.82□□□□□ -1.32
MSS18YPR134W PDR1P12383 1068 aa6.81□□□□□ -1.32
MSS18YPR134W YPR015CQ12531 247 aa6.81□□□□□ -1.32
MSS18YPR134W KIC1P38692 1080 aa6.8□□□□□ -1.32
MSS18YPR134W YDR090CQ03193 310 aa6.8□□□□□ -1.32
MSS18YPR134W VPS70P47161 811 aa6.79□□□□□ -1.32
MSS18YPR134W RAM1P22007 431 aa6.78□□□□□ -1.32
MSS18YPR134W YPR148CQ06523 435 aa6.78□□□□□ -1.32
MSS18YPR134W REF2P42073 533 aaPredicted RBP6.76□□□□□ -1.33
MSS18YPR134W GYP1Q08484 637 aa6.75□□□□□ -1.33
MSS18YPR134W PEX21P50091 288 aa6.73□□□□□ -1.33
MSS18YPR134W YRR1Q12172 810 aa6.72□□□□□ -1.33
MSS18YPR134W RAS1P01119 309 aa6.7□□□□□ -1.34
MSS18YPR134W MAK21Q12176 1025 aaKnown RBP6.7□□□□□ -1.34
MSS18YPR134W TUM1Q08686 304 aaKnown RBP6.68□□□□□ -1.34
MSS18YPR134W CKB1P43639 278 aa6.65□□□□□ -1.34
MSS18YPR134W SRC1Q03707 834 aa6.65□□□□□ -1.34
MSS18YPR134W CSC1Q06538 782 aa6.65□□□□□ -1.34
MSS18YPR134W COX6P00427 148 aa6.64□□□□□ -1.35
MSS18YPR134W GAP1P19145 602 aaPredicted RBP6.64□□□□□ -1.35
MSS18YPR134W ORC6P38826 435 aa6.64□□□□□ -1.35
MSS18YPR134W BUD20Q08004 166 aaPredicted RBP6.63□□□□□ -1.35
MSS18YPR134W TFB4Q12004 338 aa6.63□□□□□ -1.35
MSS18YPR134W SDH2P21801 266 aa6.62□□□□□ -1.35
MSS18YPR134W NUD1P32336 851 aa6.62□□□□□ -1.35
MSS18YPR134W STR2P47164 639 aa6.62□□□□□ -1.35
MSS18YPR134W ISM1P48526 1002 aa6.62□□□□□ -1.35
MSS18YPR134W SAS4Q04003 481 aa6.62□□□□□ -1.35
MSS18YPR134W DMA1P38823 416 aa6.61□□□□□ -1.35
MSS18YPR134W PRT1P06103 763 aaKnown RBP6.6□□□□□ -1.35
MSS18YPR134W AMS1P22855 1083 aa6.6□□□□□ -1.35
MSS18YPR134W NPL4P33755 580 aa6.59□□□□□ -1.35
MSS18YPR134W MVP1P40959 511 aaKnown RBP6.59□□□□□ -1.35
MSS18YPR134W PBS2P08018 668 aa6.57□□□□□ -1.36
MSS18YPR134W GCD11P32481 527 aaKnown RBP6.57□□□□□ -1.36
MSS18YPR134W YPR109WQ06104 294 aa6.57□□□□□ -1.36
MSS18YPR134W RGR1P19263 1082 aa6.55□□□□□ -1.36
MSS18YPR134W YEL077CQ3E7X8 1277 aa6.55□□□□□ -1.36
MSS18YPR134W MRF1P30775 413 aaPredicted RBP6.54□□□□□ -1.36
MSS18YPR134W SAS10Q12136 610 aaPredicted RBP6.54□□□□□ -1.36
MSS18YPR134W ERG12P07277 443 aa6.52□□□□□ -1.37
MSS18YPR134W TY1A-DR4O74302 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-HP0C2I4 478 aaKnown RBP6.51□□□□□ -1.37
MSS18YPR134W TY1A-AP0CX57 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-PR1P0CX58 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-ORP0CX59 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-PR2P0CX60 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-DR5P0CX65 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-ER2P0CX66 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-GR3P0CX67 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-LR1P0CX68 440 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms