RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeastyeast

Gene IRC16, Length 360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC16YPR038W MIF2P35201 549 aa7.02□□□□□ -1.29
IRC16YPR038W PTC4P38089 393 aa7.02□□□□□ -1.29
IRC16YPR038W YDL129WQ07555 291 aa7.01□□□□□ -1.29
IRC16YPR038W GRE2Q12068 342 aaKnown RBP7□□□□□ -1.29
IRC16YPR038W MAK11P20484 414 aaKnown RBP6.96□□□□□ -1.3
IRC16YPR038W ATH1P48016 1211 aa6.95□□□□□ -1.3
IRC16YPR038W CHL1P22516 861 aaPredicted RBP6.94□□□□□ -1.3
IRC16YPR038W RAM2P29703 316 aa6.94□□□□□ -1.3
IRC16YPR038W BCK2P33306 851 aa6.91□□□□□ -1.3
IRC16YPR038W PTC3P34221 468 aaKnown RBP6.91□□□□□ -1.3
IRC16YPR038W PRE3P38624 215 aa6.91□□□□□ -1.3
IRC16YPR038W GUT1P32190 709 aa6.9□□□□□ -1.3
IRC16YPR038W PML39Q03760 334 aa6.9□□□□□ -1.3
IRC16YPR038W EDS1P38073 919 aa6.89□□□□□ -1.31
IRC16YPR038W COQ8P27697 501 aa6.87□□□□□ -1.31
IRC16YPR038W ELP4Q02884 456 aaKnown RBP6.86□□□□□ -1.31
IRC16YPR038W VRP1P37370 817 aa6.8□□□□□ -1.32
IRC16YPR038W MID1P41821 548 aa6.79□□□□□ -1.32
IRC16YPR038W PEX29Q03370 554 aa6.79□□□□□ -1.32
IRC16YPR038W YDR344CQ05510 147 aa6.79□□□□□ -1.32
IRC16YPR038W SOL3P38858 249 aa6.76□□□□□ -1.33
IRC16YPR038W ARH1P48360 493 aa6.75□□□□□ -1.33
IRC16YPR038W NST1P53935 1240 aa6.75□□□□□ -1.33
IRC16YPR038W AI4P03878 556 aa6.74□□□□□ -1.33
IRC16YPR038W MPH3P0CE00 602 aa6.74□□□□□ -1.33
IRC16YPR038W XDJ1P39102 459 aa6.73□□□□□ -1.33
IRC16YPR038W NOP53Q12080 455 aaKnown RBP6.72□□□□□ -1.33
IRC16YPR038W SPT23P35210 1082 aa6.69□□□□□ -1.34
IRC16YPR038W YGR273CP53329 174 aa6.69□□□□□ -1.34
IRC16YPR038W HAP5Q02516 242 aa6.68□□□□□ -1.34
IRC16YPR038W ILV3P39522 585 aaKnown RBP6.67□□□□□ -1.34
IRC16YPR038W MPC54Q08550 464 aa6.64□□□□□ -1.35
IRC16YPR038W DPS1P04802 557 aaKnown RBP6.63□□□□□ -1.35
IRC16YPR038W PTC2P39966 464 aaKnown RBP6.63□□□□□ -1.35
IRC16YPR038W SLI15P38283 698 aa6.61□□□□□ -1.35
IRC16YPR038W BNI4P53858 892 aa6.61□□□□□ -1.35
IRC16YPR038W NMA111P53920 997 aa6.61□□□□□ -1.35
IRC16YPR038W SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.35
IRC16YPR038W DPL1Q05567 589 aa6.59□□□□□ -1.35
IRC16YPR038W YML082WQ04533 649 aaKnown RBP6.57□□□□□ -1.36
IRC16YPR038W KEX1P09620 729 aa6.56□□□□□ -1.36
IRC16YPR038W VHR2P40041 505 aa6.51□□□□□ -1.37
IRC16YPR038W ISU2Q12056 156 aa6.51□□□□□ -1.37
IRC16YPR038W CDC73Q06697 393 aa6.49□□□□□ -1.37
IRC16YPR038W YLR326WQ06170 240 aaKnown RBP6.48□□□□□ -1.37
IRC16YPR038W UBP14P38237 781 aaKnown RBP6.47□□□□□ -1.37
IRC16YPR038W RPP1BP10622 106 aaKnown RBP6.46□□□□□ -1.38
IRC16YPR038W RAD54P32863 898 aa6.46□□□□□ -1.38
IRC16YPR038W GYP1Q08484 637 aa6.45□□□□□ -1.38
IRC16YPR038W PCS60P38137 543 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
IRC16YPR038W YPR015CQ12531 247 aa6.44□□□□□ -1.38
IRC16YPR038W KIC1P38692 1080 aa6.42□□□□□ -1.38
IRC16YPR038W IFH1P39520 1085 aa6.41□□□□□ -1.38
IRC16YPR038W PDR1P12383 1068 aa6.4□□□□□ -1.38
IRC16YPR038W RAM1P22007 431 aa6.4□□□□□ -1.38
IRC16YPR038W RAS1P01119 309 aa6.38□□□□□ -1.39
IRC16YPR038W PEX21P50091 288 aa6.38□□□□□ -1.39
IRC16YPR038W SRC1Q03707 834 aa6.37□□□□□ -1.39
IRC16YPR038W RQC2Q12532 1038 aaKnown RBP6.36□□□□□ -1.39
IRC16YPR038W SAS4Q04003 481 aa6.35□□□□□ -1.39
IRC16YPR038W REF2P42073 533 aaPredicted RBP6.33□□□□□ -1.4
IRC16YPR038W YDR090CQ03193 310 aa6.33□□□□□ -1.4
IRC16YPR038W YRR1Q12172 810 aa6.33□□□□□ -1.4
IRC16YPR038W AMS1P22855 1083 aa6.32□□□□□ -1.4
IRC16YPR038W MRF1P30775 413 aaPredicted RBP6.29□□□□□ -1.4
IRC16YPR038W CSC1Q06538 782 aa6.29□□□□□ -1.4
IRC16YPR038W TUM1Q08686 304 aaKnown RBP6.29□□□□□ -1.4
IRC16YPR038W YEL077CQ3E7X8 1277 aa6.29□□□□□ -1.4
IRC16YPR038W DMA1P38823 416 aa6.28□□□□□ -1.4
IRC16YPR038W VPS70P47161 811 aa6.28□□□□□ -1.4
IRC16YPR038W TFB4Q12004 338 aa6.28□□□□□ -1.4
IRC16YPR038W PRT1P06103 763 aaKnown RBP6.27□□□□□ -1.41
IRC16YPR038W YPR148CQ06523 435 aa6.27□□□□□ -1.41
IRC16YPR038W BUD20Q08004 166 aaPredicted RBP6.27□□□□□ -1.41
IRC16YPR038W TRK1P12685 1235 aa6.26□□□□□ -1.41
IRC16YPR038W NPL4P33755 580 aa6.26□□□□□ -1.41
IRC16YPR038W SDH2P21801 266 aa6.24□□□□□ -1.41
IRC16YPR038W NUD1P32336 851 aa6.24□□□□□ -1.41
IRC16YPR038W ERG12P07277 443 aa6.23□□□□□ -1.41
IRC16YPR038W GAP1P19145 602 aaPredicted RBP6.23□□□□□ -1.41
IRC16YPR038W STR2P47164 639 aa6.23□□□□□ -1.41
IRC16YPR038W ISM1P48526 1002 aa6.23□□□□□ -1.41
IRC16YPR038W MAK21Q12176 1025 aaKnown RBP6.22□□□□□ -1.41
IRC16YPR038W COX6P00427 148 aa6.21□□□□□ -1.42
IRC16YPR038W GCD11P32481 527 aaKnown RBP6.21□□□□□ -1.42
IRC16YPR038W ORC6P38826 435 aa6.2□□□□□ -1.42
IRC16YPR038W SPT16P32558 1035 aaKnown RBP6.18□□□□□ -1.42
IRC16YPR038W MVP1P40959 511 aaKnown RBP6.18□□□□□ -1.42
IRC16YPR038W YPR109WQ06104 294 aa6.16□□□□□ -1.42
IRC16YPR038W RGR1P19263 1082 aa6.13□□□□□ -1.43
IRC16YPR038W PAT1P25644 796 aaKnown RBP6.13□□□□□ -1.43
IRC16YPR038W SEC2P17065 759 aa6.12□□□□□ -1.43
IRC16YPR038W SAS10Q12136 610 aaPredicted RBP6.12□□□□□ -1.43
IRC16YPR038W TY1A-DR4O74302 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-HP0C2I4 478 aaKnown RBP6.11□□□□□ -1.43
IRC16YPR038W TY1A-AP0CX57 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-PR1P0CX58 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-ORP0CX59 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-PR2P0CX60 440 aa6.11□□□□□ -1.43
IRC16YPR038W TY1A-DR5P0CX65 440 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms