RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeastyeast

Gene CSM4, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM4YPL200W JIP4Q03361 876 aa7.91□□□□□ -1.14
CSM4YPL200W YEL023CP39992 682 aa7.89□□□□□ -1.15
CSM4YPL200W ATH1P48016 1211 aa7.88□□□□□ -1.15
CSM4YPL200W EDS1P38073 919 aa7.87□□□□□ -1.15
CSM4YPL200W COQ8P27697 501 aa7.86□□□□□ -1.15
CSM4YPL200W PTC3P34221 468 aaKnown RBP7.86□□□□□ -1.15
CSM4YPL200W PTC4P38089 393 aa7.86□□□□□ -1.15
CSM4YPL200W DAN4P47179 1161 aa7.86□□□□□ -1.15
CSM4YPL200W SAP30P38429 201 aa7.84□□□□□ -1.15
CSM4YPL200W GUT1P32190 709 aa7.82□□□□□ -1.16
CSM4YPL200W YDL129WQ07555 291 aa7.81□□□□□ -1.16
CSM4YPL200W PML39Q03760 334 aa7.74□□□□□ -1.17
CSM4YPL200W CHL1P22516 861 aaPredicted RBP7.68□□□□□ -1.18
CSM4YPL200W PRE3P38624 215 aa7.68□□□□□ -1.18
CSM4YPL200W NOP53Q12080 455 aaKnown RBP7.68□□□□□ -1.18
CSM4YPL200W SOL3P38858 249 aa7.67□□□□□ -1.18
CSM4YPL200W NST1P53935 1240 aa7.65□□□□□ -1.18
CSM4YPL200W ELP4Q02884 456 aaKnown RBP7.65□□□□□ -1.18
CSM4YPL200W PEX29Q03370 554 aa7.65□□□□□ -1.18
CSM4YPL200W MID1P41821 548 aa7.64□□□□□ -1.19
CSM4YPL200W AI4P03878 556 aa7.63□□□□□ -1.19
CSM4YPL200W MPH3P0CE00 602 aa7.63□□□□□ -1.19
CSM4YPL200W BCK2P33306 851 aa7.62□□□□□ -1.19
CSM4YPL200W SET1P38827 1080 aaKnown RBP7.62□□□□□ -1.19
CSM4YPL200W YGR273CP53329 174 aa7.62□□□□□ -1.19
CSM4YPL200W YDR344CQ05510 147 aa7.61□□□□□ -1.19
CSM4YPL200W ILV3P39522 585 aaKnown RBP7.59□□□□□ -1.19
CSM4YPL200W ARH1P48360 493 aa7.56□□□□□ -1.2
CSM4YPL200W VRP1P37370 817 aa7.53□□□□□ -1.2
CSM4YPL200W DMA1P38823 416 aa7.53□□□□□ -1.2
CSM4YPL200W SLI15P38283 698 aa7.5□□□□□ -1.21
CSM4YPL200W HAP5Q02516 242 aa7.5□□□□□ -1.21
CSM4YPL200W MPC54Q08550 464 aa7.5□□□□□ -1.21
CSM4YPL200W KEX1P09620 729 aa7.49□□□□□ -1.21
CSM4YPL200W SPT23P35210 1082 aa7.49□□□□□ -1.21
CSM4YPL200W VHR2P40041 505 aa7.47□□□□□ -1.21
CSM4YPL200W IFH1P39520 1085 aa7.44□□□□□ -1.22
CSM4YPL200W NMA111P53920 997 aa7.44□□□□□ -1.22
CSM4YPL200W DPL1Q05567 589 aa7.44□□□□□ -1.22
CSM4YPL200W XDJ1P39102 459 aa7.43□□□□□ -1.22
CSM4YPL200W PTC2P39966 464 aaKnown RBP7.43□□□□□ -1.22
CSM4YPL200W BNI4P53858 892 aa7.43□□□□□ -1.22
CSM4YPL200W YLR326WQ06170 240 aaKnown RBP7.43□□□□□ -1.22
CSM4YPL200W RQC2Q12532 1038 aaKnown RBP7.43□□□□□ -1.22
CSM4YPL200W RAD54P32863 898 aa7.41□□□□□ -1.22
CSM4YPL200W UBP14P38237 781 aaKnown RBP7.41□□□□□ -1.22
CSM4YPL200W CDC73Q06697 393 aa7.38□□□□□ -1.23
CSM4YPL200W PCS60P38137 543 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
CSM4YPL200W KIC1P38692 1080 aa7.37□□□□□ -1.23
CSM4YPL200W RPP1BP10622 106 aaKnown RBP7.35□□□□□ -1.23
CSM4YPL200W YML082WQ04533 649 aaKnown RBP7.35□□□□□ -1.23
CSM4YPL200W ISU2Q12056 156 aa7.35□□□□□ -1.23
CSM4YPL200W VPS70P47161 811 aa7.33□□□□□ -1.24
CSM4YPL200W YPR148CQ06523 435 aa7.33□□□□□ -1.24
CSM4YPL200W DPS1P04802 557 aaKnown RBP7.32□□□□□ -1.24
CSM4YPL200W REF2P42073 533 aaPredicted RBP7.31□□□□□ -1.24
CSM4YPL200W YDR090CQ03193 310 aa7.29□□□□□ -1.24
CSM4YPL200W PEX21P50091 288 aa7.27□□□□□ -1.25
CSM4YPL200W PDR1P12383 1068 aa7.26□□□□□ -1.25
CSM4YPL200W YPR015CQ12531 247 aa7.26□□□□□ -1.25
CSM4YPL200W SAS10Q12136 610 aaPredicted RBP7.25□□□□□ -1.25
CSM4YPL200W GYP1Q08484 637 aa7.24□□□□□ -1.25
CSM4YPL200W RAM1P22007 431 aa7.23□□□□□ -1.25
CSM4YPL200W YRR1Q12172 810 aa7.2□□□□□ -1.26
CSM4YPL200W MAK21Q12176 1025 aaKnown RBP7.2□□□□□ -1.26
CSM4YPL200W COX6P00427 148 aa7.18□□□□□ -1.26
CSM4YPL200W CSC1Q06538 782 aa7.18□□□□□ -1.26
CSM4YPL200W TUM1Q08686 304 aaKnown RBP7.17□□□□□ -1.26
CSM4YPL200W TFB4Q12004 338 aa7.17□□□□□ -1.26
CSM4YPL200W ORC6P38826 435 aa7.15□□□□□ -1.26
CSM4YPL200W GAP1P19145 602 aaPredicted RBP7.14□□□□□ -1.27
CSM4YPL200W CKB1P43639 278 aa7.14□□□□□ -1.27
CSM4YPL200W SAS4Q04003 481 aa7.13□□□□□ -1.27
CSM4YPL200W PBS2P08018 668 aa7.12□□□□□ -1.27
CSM4YPL200W NUD1P32336 851 aa7.12□□□□□ -1.27
CSM4YPL200W NPL4P33755 580 aa7.11□□□□□ -1.27
CSM4YPL200W RAS1P01119 309 aa7.1□□□□□ -1.27
CSM4YPL200W STR2P47164 639 aa7.09□□□□□ -1.27
CSM4YPL200W BUD20Q08004 166 aaPredicted RBP7.09□□□□□ -1.27
CSM4YPL200W PRT1P06103 763 aaKnown RBP7.08□□□□□ -1.28
CSM4YPL200W MVP1P40959 511 aaKnown RBP7.08□□□□□ -1.28
CSM4YPL200W ISM1P48526 1002 aa7.08□□□□□ -1.28
CSM4YPL200W AMS1P22855 1083 aa7.07□□□□□ -1.28
CSM4YPL200W MRF1P30775 413 aaPredicted RBP7.07□□□□□ -1.28
CSM4YPL200W YPR109WQ06104 294 aa7.06□□□□□ -1.28
CSM4YPL200W YEL077CQ3E7X8 1277 aa7.06□□□□□ -1.28
CSM4YPL200W RGR1P19263 1082 aa7.05□□□□□ -1.28
CSM4YPL200W SRC1Q03707 834 aa7.05□□□□□ -1.28
CSM4YPL200W GCD11P32481 527 aaKnown RBP7.04□□□□□ -1.28
CSM4YPL200W MAM3Q12296 706 aa7.04□□□□□ -1.28
CSM4YPL200W SDH2P21801 266 aa7.03□□□□□ -1.28
CSM4YPL200W ERG12P07277 443 aa7.01□□□□□ -1.29
CSM4YPL200W SPB4P25808 606 aaPredicted RBP7□□□□□ -1.29
CSM4YPL200W SPT16P32558 1035 aaKnown RBP6.99□□□□□ -1.29
CSM4YPL200W DSF2P38213 736 aa6.99□□□□□ -1.29
CSM4YPL200W IES2P40154 320 aa6.99□□□□□ -1.29
CSM4YPL200W PSE1P32337 1089 aaKnown RBP6.98□□□□□ -1.29
CSM4YPL200W TY1A-DR4O74302 440 aa6.97□□□□□ -1.29
CSM4YPL200W TY1A-HP0C2I4 478 aaKnown RBP6.97□□□□□ -1.29
CSM4YPL200W TY1A-AP0CX57 440 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms