RNA–Protein interactions for RNA: YPL190C

NAB3, Transcript of RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene NAB3, Length 2,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	YPL190C	ABP1	P15891	592 aa	Known RBP	4.45	□□□□□ -1.7
NAB3	YPL190C	TY1B-DR4	Q07793	1604 aa		4.44	□□□□□ -1.7
NAB3	YPL190C	GYP5	Q12344	894 aa		4.44	□□□□□ -1.7
NAB3	YPL190C	RCR1	P38212	213 aa		4.43	□□□□□ -1.7
NAB3	YPL190C	JIP4	Q03361	876 aa		4.43	□□□□□ -1.7
NAB3	YPL190C	SAP30	P38429	201 aa		4.43	□□□□□ -1.7
NAB3	YPL190C	MON2	P48563	1636 aa	Predicted RBP	4.42	□□□□□ -1.7
NAB3	YPL190C	HTA1	P04911	132 aa	Known RBP	4.42	□□□□□ -1.7
NAB3	YPL190C	HTA2	P04912	132 aa		4.42	□□□□□ -1.7
NAB3	YPL190C	DAN4	P47179	1161 aa		4.41	□□□□□ -1.7
NAB3	YPL190C	YDL129W	Q07555	291 aa		4.41	□□□□□ -1.7
NAB3	YPL190C	DCW1	P36091	449 aa		4.4	□□□□□ -1.7
NAB3	YPL190C	RAM2	P29703	316 aa		4.39	□□□□□ -1.71
NAB3	YPL190C	BCK2	P33306	851 aa		4.38	□□□□□ -1.71
NAB3	YPL190C	LEU3	P08638	886 aa		4.38	□□□□□ -1.71
NAB3	YPL190C	CHL1	P22516	861 aa	Predicted RBP	4.37	□□□□□ -1.71
NAB3	YPL190C	HSL1	P34244	1518 aa		4.37	□□□□□ -1.71
NAB3	YPL190C	YEL023C	P39992	682 aa		4.37	□□□□□ -1.71
NAB3	YPL190C	PTC4	P38089	393 aa		4.36	□□□□□ -1.71
NAB3	YPL190C	PRE3	P38624	215 aa		4.36	□□□□□ -1.71
NAB3	YPL190C	SPT6	P23615	1451 aa	Known RBP	4.36	□□□□□ -1.71
NAB3	YPL190C	SET1	P38827	1080 aa	Known RBP	4.35	□□□□□ -1.71
NAB3	YPL190C	SWR1	Q05471	1514 aa		4.35	□□□□□ -1.71
NAB3	YPL190C	GRE2	Q12068	342 aa	Known RBP	4.33	□□□□□ -1.72
NAB3	YPL190C	VPS70	P47161	811 aa		4.33	□□□□□ -1.72
NAB3	YPL190C	SPB4	P25808	606 aa	Predicted RBP	4.32	□□□□□ -1.72
NAB3	YPL190C	MAK11	P20484	414 aa	Known RBP	4.3	□□□□□ -1.72
NAB3	YPL190C	MIF2	P35201	549 aa		4.3	□□□□□ -1.72
NAB3	YPL190C	ATH1	P48016	1211 aa		4.3	□□□□□ -1.72
NAB3	YPL190C	PML39	Q03760	334 aa		4.3	□□□□□ -1.72
NAB3	YPL190C	IFH1	P39520	1085 aa		4.29	□□□□□ -1.72
NAB3	YPL190C	HIR3	P47171	1648 aa		4.29	□□□□□ -1.72
NAB3	YPL190C	ELP4	Q02884	456 aa	Known RBP	4.29	□□□□□ -1.72
NAB3	YPL190C	CKB1	P43639	278 aa		4.29	□□□□□ -1.72
NAB3	YPL190C	GUT1	P32190	709 aa		4.27	□□□□□ -1.73
NAB3	YPL190C	VRP1	P37370	817 aa		4.27	□□□□□ -1.73
NAB3	YPL190C	XRN1	P22147	1528 aa	Known RBP	4.26	□□□□□ -1.73
NAB3	YPL190C	COQ8	P27697	501 aa		4.26	□□□□□ -1.73
NAB3	YPL190C	PTC3	P34221	468 aa	Known RBP	4.26	□□□□□ -1.73
NAB3	YPL190C	XDJ1	P39102	459 aa		4.26	□□□□□ -1.73
NAB3	YPL190C	YDR344C	Q05510	147 aa		4.26	□□□□□ -1.73
NAB3	YPL190C	YPR148C	Q06523	435 aa		4.26	□□□□□ -1.73
NAB3	YPL190C	EDS1	P38073	919 aa		4.25	□□□□□ -1.73
NAB3	YPL190C	RPN1	P38764	993 aa	Known RBP	4.25	□□□□□ -1.73
NAB3	YPL190C	DMA2	P53924	522 aa		4.25	□□□□□ -1.73
NAB3	YPL190C	PEX29	Q03370	554 aa		4.23	□□□□□ -1.73
NAB3	YPL190C	ARH1	P48360	493 aa		4.23	□□□□□ -1.73
NAB3	YPL190C	MID1	P41821	548 aa		4.21	□□□□□ -1.74
NAB3	YPL190C	DNA2	P38859	1522 aa		4.21	□□□□□ -1.74
NAB3	YPL190C	NST1	P53935	1240 aa		4.21	□□□□□ -1.74
NAB3	YPL190C	REV3	P14284	1504 aa		4.2	□□□□□ -1.74
NAB3	YPL190C	SIN3	P22579	1536 aa		4.2	□□□□□ -1.74
NAB3	YPL190C	DPS1	P04802	557 aa	Known RBP	4.2	□□□□□ -1.74
NAB3	YPL190C	PBS2	P08018	668 aa		4.2	□□□□□ -1.74
NAB3	YPL190C	SPT23	P35210	1082 aa		4.2	□□□□□ -1.74
NAB3	YPL190C	AI4	P03878	556 aa		4.19	□□□□□ -1.74
NAB3	YPL190C	MPH3	P0CE00	602 aa		4.19	□□□□□ -1.74
NAB3	YPL190C	KOG1	P38873	1557 aa		4.19	□□□□□ -1.74
NAB3	YPL190C	SOL3	P38858	249 aa		4.18	□□□□□ -1.74
NAB3	YPL190C	NOP53	Q12080	455 aa	Known RBP	4.18	□□□□□ -1.74
NAB3	YPL190C	DSF2	P38213	736 aa		4.17	□□□□□ -1.74
NAB3	YPL190C	REF2	P42073	533 aa	Predicted RBP	4.17	□□□□□ -1.74
NAB3	YPL190C	HAP5	Q02516	242 aa		4.16	□□□□□ -1.74
NAB3	YPL190C	ILV3	P39522	585 aa	Known RBP	4.16	□□□□□ -1.74
NAB3	YPL190C	MAM3	Q12296	706 aa		4.16	□□□□□ -1.74
NAB3	YPL190C	BUD4	P47136	1447 aa		4.15	□□□□□ -1.74
NAB3	YPL190C	SSK2	P53599	1579 aa		4.15	□□□□□ -1.75
NAB3	YPL190C	ECM5	Q03214	1411 aa		4.15	□□□□□ -1.75
NAB3	YPL190C	THO2	P53552	1597 aa	Known RBP	4.15	□□□□□ -1.75
NAB3	YPL190C	BNI4	P53858	892 aa		4.14	□□□□□ -1.75
NAB3	YPL190C	PTC2	P39966	464 aa	Known RBP	4.14	□□□□□ -1.75
NAB3	YPL190C	IES2	P40154	320 aa		4.14	□□□□□ -1.75
NAB3	YPL190C	YGR273C	P53329	174 aa		4.13	□□□□□ -1.75
NAB3	YPL190C	YNR021W	P53723	404 aa	Known RBP	4.13	□□□□□ -1.75
NAB3	YPL190C	GLC3	P32775	704 aa		4.12	□□□□□ -1.75
NAB3	YPL190C	MPC54	Q08550	464 aa		4.12	□□□□□ -1.75
NAB3	YPL190C	TAF2	P23255	1407 aa		4.12	□□□□□ -1.75
NAB3	YPL190C	KIN1	P13185	1064 aa		4.11	□□□□□ -1.75
NAB3	YPL190C	YML082W	Q04533	649 aa	Known RBP	4.11	□□□□□ -1.75
NAB3	YPL190C	MAK21	Q12176	1025 aa	Known RBP	4.11	□□□□□ -1.75
NAB3	YPL190C	VHR2	P40041	505 aa		4.1	□□□□□ -1.75
NAB3	YPL190C	CHD1	P32657	1468 aa		4.09	□□□□□ -1.75
NAB3	YPL190C	YPK9	Q12697	1472 aa		4.09	□□□□□ -1.75
NAB3	YPL190C	ATG2	P53855	1592 aa		4.09	□□□□□ -1.76
NAB3	YPL190C	KIC1	P38692	1080 aa		4.09	□□□□□ -1.76
NAB3	YPL190C	ATF2	P53296	535 aa		4.09	□□□□□ -1.76
NAB3	YPL190C	NMA111	P53920	997 aa		4.09	□□□□□ -1.76
NAB3	YPL190C	ESP1	Q03018	1630 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	PEP1	P32319	1579 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	POL1	P13382	1468 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	DIT2	P21595	489 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	SLI15	P38283	698 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	DPL1	Q05567	589 aa		4.08	□□□□□ -1.76
NAB3	YPL190C	MYO2	P19524	1574 aa	Known RBP	4.08	□□□□□ -1.76
NAB3	YPL190C	COX6	P00427	148 aa		4.07	□□□□□ -1.76
NAB3	YPL190C	SRC1	Q03707	834 aa		4.07	□□□□□ -1.76
NAB3	YPL190C	SKI3	P17883	1432 aa	Known RBP	4.07	□□□□□ -1.76
NAB3	YPL190C	NUP42	P49686	430 aa	Known RBP	4.07	□□□□□ -1.76
NAB3	YPL190C	HGH1	P48362	394 aa	Known RBP	4.06	□□□□□ -1.76
NAB3	YPL190C	AIM7	Q12156	149 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms