RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeastyeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FDH1YOR388C AIR2Q12476 344 aaKnown RBP8.95□□□□□ -0.98
FDH1YOR388C RTG1P32607 177 aa8.93□□□□□ -0.98
FDH1YOR388C JIP4Q03361 876 aa8.93□□□□□ -0.98
FDH1YOR388C SEC61P32915 480 aa8.91□□□□□ -0.98
FDH1YOR388C PTC4P38089 393 aa8.91□□□□□ -0.98
FDH1YOR388C YEL023CP39992 682 aa8.9□□□□□ -0.98
FDH1YOR388C DAN4P47179 1161 aa8.9□□□□□ -0.98
FDH1YOR388C DMA1P38823 416 aa8.88□□□□□ -0.99
FDH1YOR388C NCR1Q12200 1170 aa8.88□□□□□ -0.99
FDH1YOR388C SOL3P38858 249 aa8.85□□□□□ -0.99
FDH1YOR388C YJL171CP46992 396 aa8.84□□□□□ -0.99
FDH1YOR388C NST1P53935 1240 aa8.84□□□□□ -0.99
FDH1YOR388C IFH1P39520 1085 aa8.83□□□□□ -1
FDH1YOR388C TFG1P41895 735 aaPredicted RBP8.81□□□□□ -1
FDH1YOR388C YGR273CP53329 174 aa8.8□□□□□ -1
FDH1YOR388C BMT6Q12291 365 aa8.79□□□□□ -1
FDH1YOR388C MPH3P0CE00 602 aa8.77□□□□□ -1.01
FDH1YOR388C YPR148CQ06523 435 aa8.77□□□□□ -1.01
FDH1YOR388C AI4P03878 556 aa8.76□□□□□ -1.01
FDH1YOR388C YDL129WQ07555 291 aa8.75□□□□□ -1.01
FDH1YOR388C RQC2Q12532 1038 aaKnown RBP8.75□□□□□ -1.01
FDH1YOR388C PML39Q03760 334 aa8.71□□□□□ -1.02
FDH1YOR388C SAP30P38429 201 aa8.69□□□□□ -1.02
FDH1YOR388C ILV3P39522 585 aaKnown RBP8.69□□□□□ -1.02
FDH1YOR388C VPS70P47161 811 aa8.68□□□□□ -1.02
FDH1YOR388C UBP14P38237 781 aaKnown RBP8.67□□□□□ -1.02
FDH1YOR388C SAS10Q12136 610 aaPredicted RBP8.67□□□□□ -1.02
FDH1YOR388C KEX1P09620 729 aa8.66□□□□□ -1.02
FDH1YOR388C YLR326WQ06170 240 aaKnown RBP8.64□□□□□ -1.03
FDH1YOR388C VHR2P40041 505 aa8.63□□□□□ -1.03
FDH1YOR388C MID1P41821 548 aa8.63□□□□□ -1.03
FDH1YOR388C REF2P42073 533 aaPredicted RBP8.63□□□□□ -1.03
FDH1YOR388C CKB1P43639 278 aa8.6□□□□□ -1.03
FDH1YOR388C SLI15P38283 698 aa8.59□□□□□ -1.03
FDH1YOR388C PCS60P38137 543 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
FDH1YOR388C YDR090CQ03193 310 aa8.57□□□□□ -1.04
FDH1YOR388C CHL1P22516 861 aaPredicted RBP8.56□□□□□ -1.04
FDH1YOR388C RAD54P32863 898 aa8.56□□□□□ -1.04
FDH1YOR388C PRE3P38624 215 aa8.56□□□□□ -1.04
FDH1YOR388C ARH1P48360 493 aa8.55□□□□□ -1.04
FDH1YOR388C PEX29Q03370 554 aa8.54□□□□□ -1.04
FDH1YOR388C MAK21Q12176 1025 aaKnown RBP8.53□□□□□ -1.04
FDH1YOR388C YDR344CQ05510 147 aa8.52□□□□□ -1.05
FDH1YOR388C MPC54Q08550 464 aa8.52□□□□□ -1.05
FDH1YOR388C COX6P00427 148 aa8.51□□□□□ -1.05
FDH1YOR388C KIC1P38692 1080 aa8.51□□□□□ -1.05
FDH1YOR388C ELP4Q02884 456 aaKnown RBP8.51□□□□□ -1.05
FDH1YOR388C DPL1Q05567 589 aa8.5□□□□□ -1.05
FDH1YOR388C PBS2P08018 668 aa8.47□□□□□ -1.05
FDH1YOR388C NMA111P53920 997 aa8.47□□□□□ -1.05
FDH1YOR388C HAP5Q02516 242 aa8.47□□□□□ -1.05
FDH1YOR388C CDC73Q06697 393 aa8.46□□□□□ -1.06
FDH1YOR388C RPP1BP10622 106 aaKnown RBP8.45□□□□□ -1.06
FDH1YOR388C SPT23P35210 1082 aa8.44□□□□□ -1.06
FDH1YOR388C ISU2Q12056 156 aa8.44□□□□□ -1.06
FDH1YOR388C DSF2P38213 736 aa8.41□□□□□ -1.06
FDH1YOR388C BNI4P53858 892 aa8.41□□□□□ -1.06
FDH1YOR388C SPB4P25808 606 aaPredicted RBP8.39□□□□□ -1.07
FDH1YOR388C GAP1P19145 602 aaPredicted RBP8.38□□□□□ -1.07
FDH1YOR388C BCK2P33306 851 aa8.38□□□□□ -1.07
FDH1YOR388C ORC6P38826 435 aa8.38□□□□□ -1.07
FDH1YOR388C CSC1Q06538 782 aa8.37□□□□□ -1.07
FDH1YOR388C YML082WQ04533 649 aaKnown RBP8.36□□□□□ -1.07
FDH1YOR388C MAM3Q12296 706 aa8.36□□□□□ -1.07
FDH1YOR388C VRP1P37370 817 aa8.34□□□□□ -1.07
FDH1YOR388C PTC2P39966 464 aaKnown RBP8.34□□□□□ -1.07
FDH1YOR388C TFB4Q12004 338 aa8.33□□□□□ -1.08
FDH1YOR388C PEX21P50091 288 aa8.32□□□□□ -1.08
FDH1YOR388C MVP1P40959 511 aaKnown RBP8.3□□□□□ -1.08
FDH1YOR388C RGR1P19263 1082 aa8.28□□□□□ -1.08
FDH1YOR388C RAM1P22007 431 aa8.28□□□□□ -1.08
FDH1YOR388C PSE1P32337 1089 aaKnown RBP8.28□□□□□ -1.08
FDH1YOR388C PDR1P12383 1068 aa8.27□□□□□ -1.09
FDH1YOR388C IES2P40154 320 aa8.27□□□□□ -1.09
FDH1YOR388C NUP42P49686 430 aaKnown RBP8.27□□□□□ -1.09
FDH1YOR388C YRR1Q12172 810 aa8.27□□□□□ -1.09
FDH1YOR388C XDJ1P39102 459 aa8.26□□□□□ -1.09
FDH1YOR388C TUM1Q08686 304 aaKnown RBP8.26□□□□□ -1.09
FDH1YOR388C YPR015CQ12531 247 aa8.24□□□□□ -1.09
FDH1YOR388C DIT2P21595 489 aa8.22□□□□□ -1.09
FDH1YOR388C YPR109WQ06104 294 aa8.22□□□□□ -1.09
FDH1YOR388C CLB5P30283 435 aa8.16□□□□□ -1.1
FDH1YOR388C NUD1P32336 851 aa8.16□□□□□ -1.1
FDH1YOR388C BUD20Q08004 166 aaPredicted RBP8.15□□□□□ -1.1
FDH1YOR388C STR2P47164 639 aa8.14□□□□□ -1.11
FDH1YOR388C ISM1P48526 1002 aa8.14□□□□□ -1.11
FDH1YOR388C NPL4P33755 580 aa8.13□□□□□ -1.11
FDH1YOR388C YNR021WP53723 404 aaKnown RBP8.13□□□□□ -1.11
FDH1YOR388C SAS4Q04003 481 aa8.13□□□□□ -1.11
FDH1YOR388C GYP1Q08484 637 aa8.12□□□□□ -1.11
FDH1YOR388C PRT1P06103 763 aaKnown RBP8.11□□□□□ -1.11
FDH1YOR388C TEA1P47988 759 aa8.11□□□□□ -1.11
FDH1YOR388C LEU3P08638 886 aa8.1□□□□□ -1.11
FDH1YOR388C GCD11P32481 527 aaKnown RBP8.07□□□□□ -1.12
FDH1YOR388C ATF2P53296 535 aa8.06□□□□□ -1.12
FDH1YOR388C TY1A-DR4O74302 440 aa8.04□□□□□ -1.12
FDH1YOR388C TY1A-HP0C2I4 478 aaKnown RBP8.04□□□□□ -1.12
FDH1YOR388C TY1A-AP0CX57 440 aa8.04□□□□□ -1.12
FDH1YOR388C TY1A-PR1P0CX58 440 aa8.04□□□□□ -1.12
FDH1YOR388C TY1A-ORP0CX59 440 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms