RNA–Protein interactions for RNA: YOR367W

SCP1, Transcript of Component of yeast cortical actin cytoskeleton, yeastyeast

Gene SCP1, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCP1YOR367W SIS1P25294 352 aaKnown RBP9.6□□□□□ -0.87
SCP1YOR367W IOC2Q12072 812 aa9.56□□□□□ -0.88
SCP1YOR367W LDB19Q12502 818 aa9.55□□□□□ -0.88
SCP1YOR367W YPR148CQ06523 435 aa9.54□□□□□ -0.88
SCP1YOR367W YEL023CP39992 682 aa9.51□□□□□ -0.89
SCP1YOR367W VPS70P47161 811 aa9.51□□□□□ -0.89
SCP1YOR367W SAS10Q12136 610 aaPredicted RBP9.51□□□□□ -0.89
SCP1YOR367W JIP4Q03361 876 aa9.49□□□□□ -0.89
SCP1YOR367W YNL035CP53962 389 aaKnown RBP9.48□□□□□ -0.89
SCP1YOR367W RTG1P32607 177 aa9.46□□□□□ -0.9
SCP1YOR367W PTC4P38089 393 aa9.46□□□□□ -0.9
SCP1YOR367W FKH1P40466 484 aa9.44□□□□□ -0.9
SCP1YOR367W YGR273CP53329 174 aa9.44□□□□□ -0.9
SCP1YOR367W SOL3P38858 249 aa9.43□□□□□ -0.9
SCP1YOR367W SEC61P32915 480 aa9.42□□□□□ -0.9
SCP1YOR367W CKB1P43639 278 aa9.42□□□□□ -0.9
SCP1YOR367W TFG1P41895 735 aaPredicted RBP9.4□□□□□ -0.9
SCP1YOR367W DAN4P47179 1161 aa9.4□□□□□ -0.9
SCP1YOR367W LEU3P08638 886 aa9.39□□□□□ -0.91
SCP1YOR367W NST1P53935 1240 aa9.39□□□□□ -0.91
SCP1YOR367W NCR1Q12200 1170 aa9.39□□□□□ -0.91
SCP1YOR367W AI4P03878 556 aa9.38□□□□□ -0.91
SCP1YOR367W REF2P42073 533 aaPredicted RBP9.38□□□□□ -0.91
SCP1YOR367W MPH3P0CE00 602 aa9.37□□□□□ -0.91
SCP1YOR367W AIR2Q12476 344 aaKnown RBP9.37□□□□□ -0.91
SCP1YOR367W VHR2P40041 505 aa9.36□□□□□ -0.91
SCP1YOR367W YJL171CP46992 396 aa9.34□□□□□ -0.91
SCP1YOR367W KEX1P09620 729 aa9.32□□□□□ -0.92
SCP1YOR367W UBP14P38237 781 aaKnown RBP9.32□□□□□ -0.92
SCP1YOR367W YLR326WQ06170 240 aaKnown RBP9.31□□□□□ -0.92
SCP1YOR367W ILV3P39522 585 aaKnown RBP9.29□□□□□ -0.92
SCP1YOR367W PML39Q03760 334 aa9.29□□□□□ -0.92
SCP1YOR367W YDL129WQ07555 291 aa9.29□□□□□ -0.92
SCP1YOR367W PBS2P08018 668 aa9.27□□□□□ -0.93
SCP1YOR367W SPB4P25808 606 aaPredicted RBP9.27□□□□□ -0.93
SCP1YOR367W RAD54P32863 898 aa9.27□□□□□ -0.93
SCP1YOR367W KIC1P38692 1080 aa9.27□□□□□ -0.93
SCP1YOR367W MAK21Q12176 1025 aaKnown RBP9.27□□□□□ -0.93
SCP1YOR367W BMT6Q12291 365 aa9.26□□□□□ -0.93
SCP1YOR367W SAP30P38429 201 aa9.24□□□□□ -0.93
SCP1YOR367W YDR090CQ03193 310 aa9.23□□□□□ -0.93
SCP1YOR367W COX6P00427 148 aa9.22□□□□□ -0.93
SCP1YOR367W PCS60P38137 543 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
SCP1YOR367W SLI15P38283 698 aa9.22□□□□□ -0.93
SCP1YOR367W MID1P41821 548 aa9.21□□□□□ -0.94
SCP1YOR367W PEX29Q03370 554 aa9.21□□□□□ -0.94
SCP1YOR367W DSF2P38213 736 aa9.18□□□□□ -0.94
SCP1YOR367W MAM3Q12296 706 aa9.17□□□□□ -0.94
SCP1YOR367W RPP1BP10622 106 aaKnown RBP9.15□□□□□ -0.94
SCP1YOR367W MPC54Q08550 464 aa9.13□□□□□ -0.95
SCP1YOR367W DPL1Q05567 589 aa9.11□□□□□ -0.95
SCP1YOR367W IES2P40154 320 aa9.1□□□□□ -0.95
SCP1YOR367W CDC73Q06697 393 aa9.09□□□□□ -0.95
SCP1YOR367W ELP4Q02884 456 aaKnown RBP9.08□□□□□ -0.96
SCP1YOR367W ARH1P48360 493 aa9.07□□□□□ -0.96
SCP1YOR367W RPN1P38764 993 aaKnown RBP9.06□□□□□ -0.96
SCP1YOR367W PRE3P38624 215 aa9.05□□□□□ -0.96
SCP1YOR367W NMA111P53920 997 aa9.05□□□□□ -0.96
SCP1YOR367W HAP5Q02516 242 aa9.05□□□□□ -0.96
SCP1YOR367W CHL1P22516 861 aaPredicted RBP9.04□□□□□ -0.96
SCP1YOR367W ORC6P38826 435 aa9.04□□□□□ -0.96
SCP1YOR367W PEX21P50091 288 aa9.02□□□□□ -0.97
SCP1YOR367W YDR344CQ05510 147 aa9.02□□□□□ -0.97
SCP1YOR367W CSC1Q06538 782 aa9.02□□□□□ -0.97
SCP1YOR367W ISU2Q12056 156 aa9.02□□□□□ -0.97
SCP1YOR367W NUP42P49686 430 aaKnown RBP9.01□□□□□ -0.97
SCP1YOR367W GAP1P19145 602 aaPredicted RBP8.98□□□□□ -0.97
SCP1YOR367W PSE1P32337 1089 aaKnown RBP8.98□□□□□ -0.97
SCP1YOR367W TFB4Q12004 338 aa8.98□□□□□ -0.97
SCP1YOR367W DIT2P21595 489 aa8.97□□□□□ -0.97
SCP1YOR367W SPT23P35210 1082 aa8.97□□□□□ -0.97
SCP1YOR367W DMA2P53924 522 aa8.97□□□□□ -0.97
SCP1YOR367W BNI4P53858 892 aa8.96□□□□□ -0.98
SCP1YOR367W MVP1P40959 511 aaKnown RBP8.95□□□□□ -0.98
SCP1YOR367W RGR1P19263 1082 aa8.94□□□□□ -0.98
SCP1YOR367W YNR021WP53723 404 aaKnown RBP8.93□□□□□ -0.98
SCP1YOR367W TUM1Q08686 304 aaKnown RBP8.93□□□□□ -0.98
SCP1YOR367W PTC2P39966 464 aaKnown RBP8.92□□□□□ -0.98
SCP1YOR367W YRR1Q12172 810 aa8.92□□□□□ -0.98
SCP1YOR367W YPR109WQ06104 294 aa8.89□□□□□ -0.99
SCP1YOR367W CLB5P30283 435 aa8.88□□□□□ -0.99
SCP1YOR367W ATF2P53296 535 aa8.88□□□□□ -0.99
SCP1YOR367W GLC3P32775 704 aa8.87□□□□□ -0.99
SCP1YOR367W PDR1P12383 1068 aa8.85□□□□□ -0.99
SCP1YOR367W TEA1P47988 759 aa8.85□□□□□ -0.99
SCP1YOR367W YML082WQ04533 649 aaKnown RBP8.85□□□□□ -0.99
SCP1YOR367W BCK2P33306 851 aa8.84□□□□□ -0.99
SCP1YOR367W RLF2Q12495 606 aa8.84□□□□□ -0.99
SCP1YOR367W AIM7Q12156 149 aa8.82□□□□□ -1
SCP1YOR367W NUD1P32336 851 aa8.81□□□□□ -1
SCP1YOR367W VRP1P37370 817 aa8.81□□□□□ -1
SCP1YOR367W RAM1P22007 431 aa8.8□□□□□ -1
SCP1YOR367W NPL4P33755 580 aa8.8□□□□□ -1
SCP1YOR367W YPR015CQ12531 247 aa8.77□□□□□ -1.01
SCP1YOR367W STR2P47164 639 aa8.74□□□□□ -1.01
SCP1YOR367W ISM1P48526 1002 aa8.73□□□□□ -1.01
SCP1YOR367W KIN1P13185 1064 aa8.72□□□□□ -1.01
SCP1YOR367W NIS1P53939 407 aa8.72□□□□□ -1.01
SCP1YOR367W YMR196WQ04336 1088 aa8.72□□□□□ -1.01
SCP1YOR367W GYP1Q08484 637 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms