RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W SAM3Q08986 587 aa8.99□□□□□ -0.97
PSH1YOL054W RAM2P29703 316 aa8.97□□□□□ -0.97
PSH1YOL054W RTG3P38165 486 aa8.97□□□□□ -0.97
PSH1YOL054W STS1P38637 319 aa8.97□□□□□ -0.97
PSH1YOL054W SET1P38827 1080 aaKnown RBP8.93□□□□□ -0.98
PSH1YOL054W IFH1P39520 1085 aa8.89□□□□□ -0.99
PSH1YOL054W DAN4P47179 1161 aa8.88□□□□□ -0.99
PSH1YOL054W TCB3Q03640 1545 aaKnown RBP8.88□□□□□ -0.99
PSH1YOL054W SPB4P25808 606 aaPredicted RBP8.87□□□□□ -0.99
PSH1YOL054W RPN1P38764 993 aaKnown RBP8.87□□□□□ -0.99
PSH1YOL054W TFG1P41895 735 aaPredicted RBP8.87□□□□□ -0.99
PSH1YOL054W CKB1P43639 278 aa8.87□□□□□ -0.99
PSH1YOL054W RCR1P38212 213 aa8.86□□□□□ -0.99
PSH1YOL054W VPS70P47161 811 aa8.86□□□□□ -0.99
PSH1YOL054W SAP30P38429 201 aa8.84□□□□□ -0.99
PSH1YOL054W JIP4Q03361 876 aa8.84□□□□□ -0.99
PSH1YOL054W MAK11P20484 414 aaKnown RBP8.83□□□□□ -1
PSH1YOL054W YPR148CQ06523 435 aa8.83□□□□□ -1
PSH1YOL054W TY1B-DR4Q07793 1604 aa8.83□□□□□ -1
PSH1YOL054W ABP1P15891 592 aaKnown RBP8.8□□□□□ -1
PSH1YOL054W YDL129WQ07555 291 aa8.8□□□□□ -1
PSH1YOL054W GYP5Q12344 894 aa8.8□□□□□ -1
PSH1YOL054W BCK2P33306 851 aa8.79□□□□□ -1
PSH1YOL054W CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1.01
PSH1YOL054W HTA1P04911 132 aaKnown RBP8.75□□□□□ -1.01
PSH1YOL054W HTA2P04912 132 aa8.75□□□□□ -1.01
PSH1YOL054W DCW1P36091 449 aa8.73□□□□□ -1.01
PSH1YOL054W PTC4P38089 393 aa8.73□□□□□ -1.01
PSH1YOL054W PRE3P38624 215 aa8.73□□□□□ -1.01
PSH1YOL054W YEL023CP39992 682 aa8.71□□□□□ -1.02
PSH1YOL054W COQ8P27697 501 aa8.69□□□□□ -1.02
PSH1YOL054W PBS2P08018 668 aa8.67□□□□□ -1.02
PSH1YOL054W DMA2P53924 522 aa8.66□□□□□ -1.02
PSH1YOL054W DSF2P38213 736 aa8.65□□□□□ -1.02
PSH1YOL054W MIF2P35201 549 aa8.64□□□□□ -1.03
PSH1YOL054W NOP53Q12080 455 aaKnown RBP8.64□□□□□ -1.03
PSH1YOL054W HSL1P34244 1518 aa8.61□□□□□ -1.03
PSH1YOL054W YDR344CQ05510 147 aa8.59□□□□□ -1.03
PSH1YOL054W XDJ1P39102 459 aa8.57□□□□□ -1.04
PSH1YOL054W YNR021WP53723 404 aaKnown RBP8.57□□□□□ -1.04
PSH1YOL054W MAM3Q12296 706 aa8.57□□□□□ -1.04
PSH1YOL054W SPT6P23615 1451 aaKnown RBP8.57□□□□□ -1.04
PSH1YOL054W VRP1P37370 817 aa8.56□□□□□ -1.04
PSH1YOL054W REF2P42073 533 aaPredicted RBP8.56□□□□□ -1.04
PSH1YOL054W PML39Q03760 334 aa8.56□□□□□ -1.04
PSH1YOL054W GRE2Q12068 342 aaKnown RBP8.55□□□□□ -1.04
PSH1YOL054W EDS1P38073 919 aa8.54□□□□□ -1.04
PSH1YOL054W IES2P40154 320 aa8.51□□□□□ -1.05
PSH1YOL054W ELP4Q02884 456 aaKnown RBP8.51□□□□□ -1.05
PSH1YOL054W KIN1P13185 1064 aa8.5□□□□□ -1.05
PSH1YOL054W ECM5Q03214 1411 aa8.5□□□□□ -1.05
PSH1YOL054W MAK21Q12176 1025 aaKnown RBP8.49□□□□□ -1.05
PSH1YOL054W HIR3P47171 1648 aa8.48□□□□□ -1.05
PSH1YOL054W GLC3P32775 704 aa8.48□□□□□ -1.05
PSH1YOL054W PTC3P34221 468 aaKnown RBP8.48□□□□□ -1.05
PSH1YOL054W HGH1P48362 394 aaKnown RBP8.47□□□□□ -1.05
PSH1YOL054W AIM7Q12156 149 aa8.47□□□□□ -1.05
PSH1YOL054W GUT1P32190 709 aa8.46□□□□□ -1.06
PSH1YOL054W SKI3P17883 1432 aaKnown RBP8.46□□□□□ -1.06
PSH1YOL054W ATH1P48016 1211 aa8.45□□□□□ -1.06
PSH1YOL054W ARH1P48360 493 aa8.45□□□□□ -1.06
PSH1YOL054W NST1P53935 1240 aa8.45□□□□□ -1.06
PSH1YOL054W RLF2Q12495 606 aa8.45□□□□□ -1.06
PSH1YOL054W XRN1P22147 1528 aaKnown RBP8.44□□□□□ -1.06
PSH1YOL054W MID1P41821 548 aa8.43□□□□□ -1.06
PSH1YOL054W COX6P00427 148 aa8.42□□□□□ -1.06
PSH1YOL054W NUP42P49686 430 aaKnown RBP8.41□□□□□ -1.06
PSH1YOL054W DIT2P21595 489 aa8.4□□□□□ -1.06
PSH1YOL054W ATF2P53296 535 aa8.4□□□□□ -1.06
PSH1YOL054W DPS1P04802 557 aaKnown RBP8.39□□□□□ -1.07
PSH1YOL054W SOL3P38858 249 aa8.39□□□□□ -1.07
PSH1YOL054W SIN3P22579 1536 aa8.37□□□□□ -1.07
PSH1YOL054W BUD4P47136 1447 aa8.37□□□□□ -1.07
PSH1YOL054W THO2P53552 1597 aaKnown RBP8.36□□□□□ -1.07
PSH1YOL054W REV3P14284 1504 aa8.36□□□□□ -1.07
PSH1YOL054W VHR2P40041 505 aa8.36□□□□□ -1.07
PSH1YOL054W CHD1P32657 1468 aa8.35□□□□□ -1.07
PSH1YOL054W SPT23P35210 1082 aa8.35□□□□□ -1.07
PSH1YOL054W MPH3P0CE00 602 aa8.34□□□□□ -1.07
PSH1YOL054W KIC1P38692 1080 aa8.34□□□□□ -1.07
PSH1YOL054W MDS3P53094 1487 aa8.32□□□□□ -1.08
PSH1YOL054W AI4P03878 556 aa8.32□□□□□ -1.08
PSH1YOL054W SSK2P53599 1579 aa8.31□□□□□ -1.08
PSH1YOL054W PEX29Q03370 554 aa8.3□□□□□ -1.08
PSH1YOL054W GUA1P38625 525 aaKnown RBP8.29□□□□□ -1.08
PSH1YOL054W ILV3P39522 585 aaKnown RBP8.29□□□□□ -1.08
PSH1YOL054W UBP14P38237 781 aaKnown RBP8.28□□□□□ -1.08
PSH1YOL054W HAP5Q02516 242 aa8.28□□□□□ -1.08
PSH1YOL054W YDR090CQ03193 310 aa8.27□□□□□ -1.09
PSH1YOL054W YLR326WQ06170 240 aaKnown RBP8.27□□□□□ -1.09
PSH1YOL054W MMS22Q06164 1454 aa8.26□□□□□ -1.09
PSH1YOL054W RAD54P32863 898 aa8.25□□□□□ -1.09
PSH1YOL054W YGR273CP53329 174 aa8.25□□□□□ -1.09
PSH1YOL054W BNI4P53858 892 aa8.25□□□□□ -1.09
PSH1YOL054W SRC1Q03707 834 aa8.24□□□□□ -1.09
PSH1YOL054W YML082WQ04533 649 aaKnown RBP8.24□□□□□ -1.09
PSH1YOL054W MYO2P19524 1574 aaKnown RBP8.23□□□□□ -1.09
PSH1YOL054W ESP1Q03018 1630 aa8.23□□□□□ -1.09
PSH1YOL054W HPC2Q01448 625 aa8.23□□□□□ -1.09
PSH1YOL054W PSE1P32337 1089 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms