RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeastyeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNA1YMR235C GRE2Q12068 342 aaKnown RBP8.28□□□□□ -1.08
RNA1YMR235C COQ8P27697 501 aa8.26□□□□□ -1.09
RNA1YMR235C TFG1P41895 735 aaPredicted RBP8.26□□□□□ -1.09
RNA1YMR235C PTC3P34221 468 aaKnown RBP8.25□□□□□ -1.09
RNA1YMR235C EDS1P38073 919 aa8.25□□□□□ -1.09
RNA1YMR235C DAN4P47179 1161 aa8.25□□□□□ -1.09
RNA1YMR235C PTC4P38089 393 aa8.23□□□□□ -1.09
RNA1YMR235C YEL023CP39992 682 aa8.23□□□□□ -1.09
RNA1YMR235C ATH1P48016 1211 aa8.23□□□□□ -1.09
RNA1YMR235C GUT1P32190 709 aa8.22□□□□□ -1.09
RNA1YMR235C YDL129WQ07555 291 aa8.17□□□□□ -1.1
RNA1YMR235C NOP53Q12080 455 aaKnown RBP8.17□□□□□ -1.1
RNA1YMR235C SAP30P38429 201 aa8.14□□□□□ -1.11
RNA1YMR235C NST1P53935 1240 aa8.08□□□□□ -1.12
RNA1YMR235C SOL3P38858 249 aa8.06□□□□□ -1.12
RNA1YMR235C PML39Q03760 334 aa8.06□□□□□ -1.12
RNA1YMR235C AI4P03878 556 aa8.04□□□□□ -1.12
RNA1YMR235C MPH3P0CE00 602 aa8.04□□□□□ -1.12
RNA1YMR235C CHL1P22516 861 aaPredicted RBP8.03□□□□□ -1.12
RNA1YMR235C SET1P38827 1080 aaKnown RBP8.03□□□□□ -1.12
RNA1YMR235C PRE3P38624 215 aa8.01□□□□□ -1.13
RNA1YMR235C YGR273CP53329 174 aa8.01□□□□□ -1.13
RNA1YMR235C MID1P41821 548 aa7.96□□□□□ -1.14
RNA1YMR235C ILV3P39522 585 aaKnown RBP7.95□□□□□ -1.14
RNA1YMR235C TAF7Q05021 590 aa7.95□□□□□ -1.14
RNA1YMR235C ELP4Q02884 456 aaKnown RBP7.94□□□□□ -1.14
RNA1YMR235C BCK2P33306 851 aa7.93□□□□□ -1.14
RNA1YMR235C PEX29Q03370 554 aa7.93□□□□□ -1.14
RNA1YMR235C ARH1P48360 493 aa7.92□□□□□ -1.14
RNA1YMR235C YDR344CQ05510 147 aa7.91□□□□□ -1.14
RNA1YMR235C IFH1P39520 1085 aa7.89□□□□□ -1.15
RNA1YMR235C KEX1P09620 729 aa7.87□□□□□ -1.15
RNA1YMR235C SLI15P38283 698 aa7.86□□□□□ -1.15
RNA1YMR235C HAP5Q02516 242 aa7.85□□□□□ -1.15
RNA1YMR235C MPC54Q08550 464 aa7.85□□□□□ -1.15
RNA1YMR235C SPT23P35210 1082 aa7.84□□□□□ -1.15
RNA1YMR235C VRP1P37370 817 aa7.82□□□□□ -1.16
RNA1YMR235C UBP14P38237 781 aaKnown RBP7.82□□□□□ -1.16
RNA1YMR235C YLR326WQ06170 240 aaKnown RBP7.82□□□□□ -1.16
RNA1YMR235C VHR2P40041 505 aa7.81□□□□□ -1.16
RNA1YMR235C DPL1Q05567 589 aa7.81□□□□□ -1.16
RNA1YMR235C BNI4P53858 892 aa7.8□□□□□ -1.16
RNA1YMR235C YPR148CQ06523 435 aa7.8□□□□□ -1.16
RNA1YMR235C NMA111P53920 997 aa7.79□□□□□ -1.16
RNA1YMR235C XDJ1P39102 459 aa7.78□□□□□ -1.16
RNA1YMR235C RAD54P32863 898 aa7.77□□□□□ -1.17
RNA1YMR235C PTC2P39966 464 aaKnown RBP7.76□□□□□ -1.17
RNA1YMR235C PCS60P38137 543 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
RNA1YMR235C YML082WQ04533 649 aaKnown RBP7.74□□□□□ -1.17
RNA1YMR235C REF2P42073 533 aaPredicted RBP7.73□□□□□ -1.17
RNA1YMR235C ISU2Q12056 156 aa7.73□□□□□ -1.17
RNA1YMR235C RPP1BP10622 106 aaKnown RBP7.72□□□□□ -1.17
RNA1YMR235C CDC73Q06697 393 aa7.72□□□□□ -1.17
RNA1YMR235C DMA1P38823 416 aa7.71□□□□□ -1.18
RNA1YMR235C KIC1P38692 1080 aa7.7□□□□□ -1.18
RNA1YMR235C VPS70P47161 811 aa7.7□□□□□ -1.18
RNA1YMR235C YDR090CQ03193 310 aa7.7□□□□□ -1.18
RNA1YMR235C MAK21Q12176 1025 aaKnown RBP7.64□□□□□ -1.19
RNA1YMR235C RAM1P22007 431 aa7.62□□□□□ -1.19
RNA1YMR235C COX6P00427 148 aa7.61□□□□□ -1.19
RNA1YMR235C YPR015CQ12531 247 aa7.6□□□□□ -1.19
RNA1YMR235C DPS1P04802 557 aaKnown RBP7.59□□□□□ -1.19
RNA1YMR235C CKB1P43639 278 aa7.59□□□□□ -1.19
RNA1YMR235C GAP1P19145 602 aaPredicted RBP7.58□□□□□ -1.2
RNA1YMR235C PEX21P50091 288 aa7.58□□□□□ -1.2
RNA1YMR235C CSC1Q06538 782 aa7.58□□□□□ -1.2
RNA1YMR235C PDR1P12383 1068 aa7.57□□□□□ -1.2
RNA1YMR235C TFB4Q12004 338 aa7.57□□□□□ -1.2
RNA1YMR235C ORC6P38826 435 aa7.55□□□□□ -1.2
RNA1YMR235C YRR1Q12172 810 aa7.54□□□□□ -1.2
RNA1YMR235C PBS2P08018 668 aa7.52□□□□□ -1.21
RNA1YMR235C GYP1Q08484 637 aa7.52□□□□□ -1.21
RNA1YMR235C SAS10Q12136 610 aaPredicted RBP7.52□□□□□ -1.21
RNA1YMR235C SAS4Q04003 481 aa7.51□□□□□ -1.21
RNA1YMR235C TUM1Q08686 304 aaKnown RBP7.51□□□□□ -1.21
RNA1YMR235C LEO1P38439 464 aa7.48□□□□□ -1.21
RNA1YMR235C MVP1P40959 511 aaKnown RBP7.48□□□□□ -1.21
RNA1YMR235C RGR1P19263 1082 aa7.45□□□□□ -1.22
RNA1YMR235C NUD1P32336 851 aa7.45□□□□□ -1.22
RNA1YMR235C BUD20Q08004 166 aaPredicted RBP7.45□□□□□ -1.22
RNA1YMR235C STR2P47164 639 aa7.44□□□□□ -1.22
RNA1YMR235C PRT1P06103 763 aaKnown RBP7.43□□□□□ -1.22
RNA1YMR235C NPL4P33755 580 aa7.43□□□□□ -1.22
RNA1YMR235C ISM1P48526 1002 aa7.43□□□□□ -1.22
RNA1YMR235C YPR109WQ06104 294 aa7.43□□□□□ -1.22
RNA1YMR235C MAM3Q12296 706 aa7.43□□□□□ -1.22
RNA1YMR235C MRF1P30775 413 aaPredicted RBP7.41□□□□□ -1.22
RNA1YMR235C DSF2P38213 736 aa7.41□□□□□ -1.22
RNA1YMR235C RAS1P01119 309 aa7.4□□□□□ -1.22
RNA1YMR235C AMS1P22855 1083 aa7.4□□□□□ -1.22
RNA1YMR235C PSE1P32337 1089 aaKnown RBP7.4□□□□□ -1.22
RNA1YMR235C SDH2P21801 266 aa7.38□□□□□ -1.23
RNA1YMR235C YEL077CQ3E7X8 1277 aa7.38□□□□□ -1.23
RNA1YMR235C SPB4P25808 606 aaPredicted RBP7.36□□□□□ -1.23
RNA1YMR235C GCD11P32481 527 aaKnown RBP7.36□□□□□ -1.23
RNA1YMR235C IES2P40154 320 aa7.36□□□□□ -1.23
RNA1YMR235C SRC1Q03707 834 aa7.36□□□□□ -1.23
RNA1YMR235C CLB5P30283 435 aa7.35□□□□□ -1.23
RNA1YMR235C TY1A-DR4O74302 440 aa7.33□□□□□ -1.24
RNA1YMR235C TY1A-HP0C2I4 478 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms