RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	MIF2	P35201	549 aa		4.67	□□□□□ -1.66
SPT21	YMR179W	PTC3	P34221	468 aa	Known RBP	4.66	□□□□□ -1.66
SPT21	YMR179W	YEL023C	P39992	682 aa		4.66	□□□□□ -1.66
SPT21	YMR179W	GRE2	Q12068	342 aa	Known RBP	4.66	□□□□□ -1.66
SPT21	YMR179W	COQ8	P27697	501 aa		4.65	□□□□□ -1.66
SPT21	YMR179W	PTC4	P38089	393 aa		4.65	□□□□□ -1.66
SPT21	YMR179W	GUT1	P32190	709 aa		4.63	□□□□□ -1.67
SPT21	YMR179W	TFG1	P41895	735 aa	Predicted RBP	4.62	□□□□□ -1.67
SPT21	YMR179W	ATH1	P48016	1211 aa		4.62	□□□□□ -1.67
SPT21	YMR179W	NST1	P53935	1240 aa		4.62	□□□□□ -1.67
SPT21	YMR179W	YDL129W	Q07555	291 aa		4.61	□□□□□ -1.67
SPT21	YMR179W	SAP30	P38429	201 aa		4.6	□□□□□ -1.67
SPT21	YMR179W	NOP53	Q12080	455 aa	Known RBP	4.6	□□□□□ -1.67
SPT21	YMR179W	SOL3	P38858	249 aa		4.6	□□□□□ -1.67
SPT21	YMR179W	PML39	Q03760	334 aa		4.56	□□□□□ -1.68
SPT21	YMR179W	AI4	P03878	556 aa		4.54	□□□□□ -1.68
SPT21	YMR179W	MPH3	P0CE00	602 aa		4.54	□□□□□ -1.68
SPT21	YMR179W	CHL1	P22516	861 aa	Predicted RBP	4.54	□□□□□ -1.68
SPT21	YMR179W	PRE3	P38624	215 aa		4.54	□□□□□ -1.68
SPT21	YMR179W	YDR344C	Q05510	147 aa		4.54	□□□□□ -1.68
SPT21	YMR179W	ILV3	P39522	585 aa	Known RBP	4.53	□□□□□ -1.68
SPT21	YMR179W	YGR273C	P53329	174 aa		4.53	□□□□□ -1.68
SPT21	YMR179W	MID1	P41821	548 aa		4.52	□□□□□ -1.69
SPT21	YMR179W	SET1	P38827	1080 aa	Known RBP	4.5	□□□□□ -1.69
SPT21	YMR179W	ARH1	P48360	493 aa		4.49	□□□□□ -1.69
SPT21	YMR179W	BCK2	P33306	851 aa		4.48	□□□□□ -1.69
SPT21	YMR179W	ELP4	Q02884	456 aa	Known RBP	4.46	□□□□□ -1.7
SPT21	YMR179W	SLI15	P38283	698 aa		4.44	□□□□□ -1.7
SPT21	YMR179W	PEX29	Q03370	554 aa		4.44	□□□□□ -1.7
SPT21	YMR179W	MPC54	Q08550	464 aa		4.44	□□□□□ -1.7
SPT21	YMR179W	KEX1	P09620	729 aa		4.44	□□□□□ -1.7
SPT21	YMR179W	UBP14	P38237	781 aa	Known RBP	4.43	□□□□□ -1.7
SPT21	YMR179W	VRP1	P37370	817 aa		4.42	□□□□□ -1.7
SPT21	YMR179W	HAP5	Q02516	242 aa		4.42	□□□□□ -1.7
SPT21	YMR179W	YLR326W	Q06170	240 aa	Known RBP	4.42	□□□□□ -1.7
SPT21	YMR179W	SPT23	P35210	1082 aa		4.42	□□□□□ -1.7
SPT21	YMR179W	XDJ1	P39102	459 aa		4.41	□□□□□ -1.7
SPT21	YMR179W	BNI4	P53858	892 aa		4.41	□□□□□ -1.7
SPT21	YMR179W	DPL1	Q05567	589 aa		4.4	□□□□□ -1.71
SPT21	YMR179W	IFH1	P39520	1085 aa		4.39	□□□□□ -1.71
SPT21	YMR179W	VHR2	P40041	505 aa		4.39	□□□□□ -1.71
SPT21	YMR179W	NMA111	P53920	997 aa		4.39	□□□□□ -1.71
SPT21	YMR179W	YPR148C	Q06523	435 aa		4.39	□□□□□ -1.71
SPT21	YMR179W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	RIP-Chip
SPT21	YMR179W	YML082W	Q04533	649 aa	Known RBP	4.38	□□□□□ -1.71
SPT21	YMR179W	YDR090C	Q03193	310 aa		4.37	□□□□□ -1.71
SPT21	YMR179W	CDC73	Q06697	393 aa		4.37	□□□□□ -1.71
SPT21	YMR179W	RAD54	P32863	898 aa		4.35	□□□□□ -1.71
SPT21	YMR179W	PTC2	P39966	464 aa	Known RBP	4.35	□□□□□ -1.71
SPT21	YMR179W	ISU2	Q12056	156 aa		4.35	□□□□□ -1.71
SPT21	YMR179W	RAM1	P22007	431 aa		4.34	□□□□□ -1.72
SPT21	YMR179W	YPR015C	Q12531	247 aa		4.33	□□□□□ -1.72
SPT21	YMR179W	REF2	P42073	533 aa	Predicted RBP	4.33	□□□□□ -1.72
SPT21	YMR179W	VPS70	P47161	811 aa		4.31	□□□□□ -1.72
SPT21	YMR179W	GAP1	P19145	602 aa	Predicted RBP	4.3	□□□□□ -1.72
SPT21	YMR179W	PDR1	P12383	1068 aa		4.29	□□□□□ -1.72
SPT21	YMR179W	DPS1	P04802	557 aa	Known RBP	4.29	□□□□□ -1.72
SPT21	YMR179W	KIC1	P38692	1080 aa		4.29	□□□□□ -1.72
SPT21	YMR179W	RPP1B	P10622	106 aa	Known RBP	4.28	□□□□□ -1.72
SPT21	YMR179W	COX6	P00427	148 aa		4.28	□□□□□ -1.72
SPT21	YMR179W	ORC6	P38826	435 aa		4.27	□□□□□ -1.73
SPT21	YMR179W	MAK21	Q12176	1025 aa	Known RBP	4.27	□□□□□ -1.73
SPT21	YMR179W	CSC1	Q06538	782 aa		4.26	□□□□□ -1.73
SPT21	YMR179W	TFB4	Q12004	338 aa		4.25	□□□□□ -1.73
SPT21	YMR179W	YRR1	Q12172	810 aa		4.24	□□□□□ -1.73
SPT21	YMR179W	DMA1	P38823	416 aa		4.23	□□□□□ -1.73
SPT21	YMR179W	SAS10	Q12136	610 aa	Predicted RBP	4.23	□□□□□ -1.73
SPT21	YMR179W	SDH2	P21801	266 aa		4.23	□□□□□ -1.73
SPT21	YMR179W	CKB1	P43639	278 aa		4.23	□□□□□ -1.73
SPT21	YMR179W	PEX21	P50091	288 aa		4.23	□□□□□ -1.73
SPT21	YMR179W	SRC1	Q03707	834 aa		4.23	□□□□□ -1.73
SPT21	YMR179W	STR2	P47164	639 aa		4.22	□□□□□ -1.73
SPT21	YMR179W	SAS4	Q04003	481 aa		4.22	□□□□□ -1.73
SPT21	YMR179W	BUD20	Q08004	166 aa	Predicted RBP	4.22	□□□□□ -1.73
SPT21	YMR179W	GYP1	Q08484	637 aa		4.22	□□□□□ -1.73
SPT21	YMR179W	TUM1	Q08686	304 aa	Known RBP	4.22	□□□□□ -1.73
SPT21	YMR179W	MVP1	P40959	511 aa	Known RBP	4.21	□□□□□ -1.73
SPT21	YMR179W	RAS1	P01119	309 aa		4.21	□□□□□ -1.74
SPT21	YMR179W	PBS2	P08018	668 aa		4.2	□□□□□ -1.74
SPT21	YMR179W	RGR1	P19263	1082 aa		4.2	□□□□□ -1.74
SPT21	YMR179W	ISM1	P48526	1002 aa		4.2	□□□□□ -1.74
SPT21	YMR179W	RGA2	Q06407	1009 aa		4.2	□□□□□ -1.74
SPT21	YMR179W	NUD1	P32336	851 aa		4.2	□□□□□ -1.74
SPT21	YMR179W	PRT1	P06103	763 aa	Known RBP	4.19	□□□□□ -1.74
SPT21	YMR179W	AMS1	P22855	1083 aa		4.18	□□□□□ -1.74
SPT21	YMR179W	TY1A-DR4	O74302	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-H	P0C2I4	478 aa	Known RBP	4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-A	P0CX57	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-PR1	P0CX58	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-OR	P0CX59	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-PR2	P0CX60	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-DR5	P0CX65	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-ER2	P0CX66	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-GR3	P0CX67	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-LR1	P0CX68	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-MR2	P0CX69	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	SEC2	P17065	759 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	DSF2	P38213	736 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-JR2	P47099	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-DR1	Q03856	440 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms