RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W EDS1P38073 919 aa11.24□□□□□ -0.61
CSI1YMR025W TFG1P41895 735 aaPredicted RBP11.24□□□□□ -0.61
CSI1YMR025W GRE2Q12068 342 aaKnown RBP11.24□□□□□ -0.61
CSI1YMR025W YEL023CP39992 682 aa11.23□□□□□ -0.61
CSI1YMR025W PTC3P34221 468 aaKnown RBP11.2□□□□□ -0.62
CSI1YMR025W PTC4P38089 393 aa11.2□□□□□ -0.62
CSI1YMR025W COQ8P27697 501 aa11.18□□□□□ -0.62
CSI1YMR025W SAP30P38429 201 aa11.16□□□□□ -0.62
CSI1YMR025W ATH1P48016 1211 aa11.16□□□□□ -0.62
CSI1YMR025W YDL129WQ07555 291 aa11.15□□□□□ -0.62
CSI1YMR025W GUT1P32190 709 aa11.13□□□□□ -0.63
CSI1YMR025W NST1P53935 1240 aa11.02□□□□□ -0.65
CSI1YMR025W PML39Q03760 334 aa11.01□□□□□ -0.65
CSI1YMR025W SOL3P38858 249 aa11□□□□□ -0.65
CSI1YMR025W NOP53Q12080 455 aaKnown RBP10.97□□□□□ -0.65
CSI1YMR025W CHL1P22516 861 aaPredicted RBP10.96□□□□□ -0.65
CSI1YMR025W PRE3P38624 215 aa10.96□□□□□ -0.65
CSI1YMR025W YDR344CQ05510 147 aa10.92□□□□□ -0.66
CSI1YMR025W MPH3P0CE00 602 aa10.91□□□□□ -0.66
CSI1YMR025W AI4P03878 556 aa10.9□□□□□ -0.66
CSI1YMR025W MID1P41821 548 aa10.9□□□□□ -0.66
CSI1YMR025W BCK2P33306 851 aa10.87□□□□□ -0.67
CSI1YMR025W ILV3P39522 585 aaKnown RBP10.87□□□□□ -0.67
CSI1YMR025W YGR273CP53329 174 aa10.86□□□□□ -0.67
CSI1YMR025W ELP4Q02884 456 aaKnown RBP10.84□□□□□ -0.67
CSI1YMR025W SET1P38827 1080 aaKnown RBP10.81□□□□□ -0.68
CSI1YMR025W ARH1P48360 493 aa10.79□□□□□ -0.68
CSI1YMR025W PEX29Q03370 554 aa10.79□□□□□ -0.68
CSI1YMR025W VRP1P37370 817 aa10.72□□□□□ -0.69
CSI1YMR025W SLI15P38283 698 aa10.69□□□□□ -0.7
CSI1YMR025W MPC54Q08550 464 aa10.69□□□□□ -0.7
CSI1YMR025W HAP5Q02516 242 aa10.68□□□□□ -0.7
CSI1YMR025W SPT23P35210 1082 aa10.67□□□□□ -0.7
CSI1YMR025W KEX1P09620 729 aa10.66□□□□□ -0.7
CSI1YMR025W XDJ1P39102 459 aa10.63□□□□□ -0.71
CSI1YMR025W BNI4P53858 892 aa10.6□□□□□ -0.71
CSI1YMR025W UBP14P38237 781 aaKnown RBP10.59□□□□□ -0.71
CSI1YMR025W VHR2P40041 505 aa10.59□□□□□ -0.71
CSI1YMR025W NMA111P53920 997 aa10.59□□□□□ -0.71
CSI1YMR025W DPL1Q05567 589 aa10.59□□□□□ -0.71
CSI1YMR025W YLR326WQ06170 240 aaKnown RBP10.59□□□□□ -0.71
CSI1YMR025W PTC2P39966 464 aaKnown RBP10.54□□□□□ -0.72
CSI1YMR025W IFH1P39520 1085 aa10.52□□□□□ -0.73
CSI1YMR025W YML082WQ04533 649 aaKnown RBP10.52□□□□□ -0.73
CSI1YMR025W CDC73Q06697 393 aa10.51□□□□□ -0.73
CSI1YMR025W PCS60P38137 543 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73not detected
CSI1YMR025W RAD54P32863 898 aa10.49□□□□□ -0.73
CSI1YMR025W ISU2Q12056 156 aa10.47□□□□□ -0.73
CSI1YMR025W YPR148CQ06523 435 aa10.45□□□□□ -0.74
CSI1YMR025W YDR090CQ03193 310 aa10.43□□□□□ -0.74
CSI1YMR025W DPS1P04802 557 aaKnown RBP10.4□□□□□ -0.74
CSI1YMR025W YPR015CQ12531 247 aa10.4□□□□□ -0.74
CSI1YMR025W RAM1P22007 431 aa10.38□□□□□ -0.75
CSI1YMR025W REF2P42073 533 aaPredicted RBP10.38□□□□□ -0.75
CSI1YMR025W RPP1BP10622 106 aaKnown RBP10.36□□□□□ -0.75
CSI1YMR025W KIC1P38692 1080 aa10.36□□□□□ -0.75
CSI1YMR025W VPS70P47161 811 aa10.36□□□□□ -0.75
CSI1YMR025W PDR1P12383 1068 aa10.34□□□□□ -0.75
CSI1YMR025W GAP1P19145 602 aaPredicted RBP10.24□□□□□ -0.77
CSI1YMR025W PEX21P50091 288 aa10.24□□□□□ -0.77
CSI1YMR025W GYP1Q08484 637 aa10.23□□□□□ -0.77
CSI1YMR025W YRR1Q12172 810 aa10.22□□□□□ -0.77
CSI1YMR025W COX6P00427 148 aa10.21□□□□□ -0.77
CSI1YMR025W CSC1Q06538 782 aa10.21□□□□□ -0.77
CSI1YMR025W MAK21Q12176 1025 aaKnown RBP10.21□□□□□ -0.77
CSI1YMR025W ORC6P38826 435 aa10.2□□□□□ -0.78
CSI1YMR025W TFB4Q12004 338 aa10.19□□□□□ -0.78
CSI1YMR025W TUM1Q08686 304 aaKnown RBP10.17□□□□□ -0.78
CSI1YMR025W RAS1P01119 309 aa10.16□□□□□ -0.78
CSI1YMR025W SRC1Q03707 834 aa10.16□□□□□ -0.78
CSI1YMR025W SAS4Q04003 481 aa10.15□□□□□ -0.78
CSI1YMR025W BUD20Q08004 166 aaPredicted RBP10.14□□□□□ -0.79
CSI1YMR025W STR2P47164 639 aa10.12□□□□□ -0.79
CSI1YMR025W SDH2P21801 266 aa10.11□□□□□ -0.79
CSI1YMR025W NUD1P32336 851 aa10.1□□□□□ -0.79
CSI1YMR025W DMA1P38823 416 aa10.1□□□□□ -0.79
CSI1YMR025W CKB1P43639 278 aa10.1□□□□□ -0.79
CSI1YMR025W ISM1P48526 1002 aa10.1□□□□□ -0.79
CSI1YMR025W MVP1P40959 511 aaKnown RBP10.09□□□□□ -0.79
CSI1YMR025W AMS1P22855 1083 aa10.08□□□□□ -0.8
CSI1YMR025W PRT1P06103 763 aaKnown RBP10.07□□□□□ -0.8
CSI1YMR025W PBS2P08018 668 aa10.07□□□□□ -0.8
CSI1YMR025W RGR1P19263 1082 aa10.05□□□□□ -0.8
CSI1YMR025W NPL4P33755 580 aa10.03□□□□□ -0.8
CSI1YMR025W YPR109WQ06104 294 aa10.03□□□□□ -0.8
CSI1YMR025W MRF1P30775 413 aaPredicted RBP10.01□□□□□ -0.81
CSI1YMR025W SAS10Q12136 610 aaPredicted RBP10□□□□□ -0.81
CSI1YMR025W YEL077CQ3E7X8 1277 aa10□□□□□ -0.81
CSI1YMR025W GCD11P32481 527 aaKnown RBP9.98□□□□□ -0.81
CSI1YMR025W TY1A-DR4O74302 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-HP0C2I4 478 aaKnown RBP9.97□□□□□ -0.81
CSI1YMR025W TY1A-AP0CX57 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-PR1P0CX58 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-ORP0CX59 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-PR2P0CX60 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-DR5P0CX65 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-ER2P0CX66 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-GR3P0CX67 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-LR1P0CX68 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-MR2P0CX69 440 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms