RNA–Protein interactions for RNA: YLR116W

MSL5, Transcript of Component of commitment complex, yeast

Gene MSL5, Length 1,431 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSL5	YLR116W	YEL023C	P39992	682 aa		7.27	□□□□□ -1.24
MSL5	YLR116W	YDL129W	Q07555	291 aa		7.27	□□□□□ -1.25
MSL5	YLR116W	GRE2	Q12068	342 aa	Known RBP	7.27	□□□□□ -1.25
MSL5	YLR116W	SAP30	P38429	201 aa		7.26	□□□□□ -1.25
MSL5	YLR116W	MIF2	P35201	549 aa		7.25	□□□□□ -1.25
MSL5	YLR116W	RAM2	P29703	316 aa		7.23	□□□□□ -1.25
MSL5	YLR116W	ATH1	P48016	1211 aa		7.21	□□□□□ -1.25
MSL5	YLR116W	CHL1	P22516	861 aa	Predicted RBP	7.18	□□□□□ -1.26
MSL5	YLR116W	GUT1	P32190	709 aa		7.18	□□□□□ -1.26
MSL5	YLR116W	PTC3	P34221	468 aa	Known RBP	7.18	□□□□□ -1.26
MSL5	YLR116W	EDS1	P38073	919 aa		7.16	□□□□□ -1.26
MSL5	YLR116W	PRE3	P38624	215 aa		7.16	□□□□□ -1.26
MSL5	YLR116W	COQ8	P27697	501 aa		7.15	□□□□□ -1.27
MSL5	YLR116W	BCK2	P33306	851 aa		7.14	□□□□□ -1.27
MSL5	YLR116W	PML39	Q03760	334 aa		7.12	□□□□□ -1.27
MSL5	YLR116W	NOP53	Q12080	455 aa	Known RBP	7.08	□□□□□ -1.28
MSL5	YLR116W	ELP4	Q02884	456 aa	Known RBP	7.07	□□□□□ -1.28
MSL5	YLR116W	AI4	P03878	556 aa		7.04	□□□□□ -1.28
MSL5	YLR116W	NST1	P53935	1240 aa		7.04	□□□□□ -1.28
MSL5	YLR116W	MPH3	P0CE00	602 aa		7.02	□□□□□ -1.29
MSL5	YLR116W	SOL3	P38858	249 aa		7.02	□□□□□ -1.29
MSL5	YLR116W	PEX29	Q03370	554 aa		7.02	□□□□□ -1.29
MSL5	YLR116W	ARH1	P48360	493 aa		7.01	□□□□□ -1.29
MSL5	YLR116W	MID1	P41821	548 aa		7.01	□□□□□ -1.29
MSL5	YLR116W	VRP1	P37370	817 aa		7	□□□□□ -1.29
MSL5	YLR116W	YDR344C	Q05510	147 aa		6.99	□□□□□ -1.29
MSL5	YLR116W	YGR273C	P53329	174 aa		6.98	□□□□□ -1.29
MSL5	YLR116W	XDJ1	P39102	459 aa		6.97	□□□□□ -1.29
MSL5	YLR116W	SPT23	P35210	1082 aa		6.94	□□□□□ -1.3
MSL5	YLR116W	ILV3	P39522	585 aa	Known RBP	6.93	□□□□□ -1.3
MSL5	YLR116W	HAP5	Q02516	242 aa		6.93	□□□□□ -1.3
MSL5	YLR116W	BNI4	P53858	892 aa		6.89	□□□□□ -1.31
MSL5	YLR116W	MPC54	Q08550	464 aa		6.89	□□□□□ -1.31
MSL5	YLR116W	SET1	P38827	1080 aa	Known RBP	6.87	□□□□□ -1.31
MSL5	YLR116W	PTC2	P39966	464 aa	Known RBP	6.87	□□□□□ -1.31
MSL5	YLR116W	SLI15	P38283	698 aa		6.86	□□□□□ -1.31
MSL5	YLR116W	NMA111	P53920	997 aa		6.84	□□□□□ -1.31
MSL5	YLR116W	DPL1	Q05567	589 aa		6.84	□□□□□ -1.31
MSL5	YLR116W	DPS1	P04802	557 aa	Known RBP	6.84	□□□□□ -1.32
MSL5	YLR116W	YML082W	Q04533	649 aa	Known RBP	6.84	□□□□□ -1.32
MSL5	YLR116W	KEX1	P09620	729 aa		6.83	□□□□□ -1.32
MSL5	YLR116W	ISU2	Q12056	156 aa		6.77	□□□□□ -1.33
MSL5	YLR116W	IFH1	P39520	1085 aa		6.76	□□□□□ -1.33
MSL5	YLR116W	YLR326W	Q06170	240 aa	Known RBP	6.76	□□□□□ -1.33
MSL5	YLR116W	RPP1B	P10622	106 aa	Known RBP	6.76	□□□□□ -1.33
MSL5	YLR116W	VHR2	P40041	505 aa		6.76	□□□□□ -1.33
MSL5	YLR116W	UBP14	P38237	781 aa	Known RBP	6.75	□□□□□ -1.33
MSL5	YLR116W	RAD54	P32863	898 aa		6.74	□□□□□ -1.33
MSL5	YLR116W	CDC73	Q06697	393 aa		6.73	□□□□□ -1.33
MSL5	YLR116W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.7	□□□□□ -1.34	not detected
MSL5	YLR116W	KIC1	P38692	1080 aa		6.68	□□□□□ -1.34
MSL5	YLR116W	RAM1	P22007	431 aa		6.67	□□□□□ -1.34
MSL5	YLR116W	YPR015C	Q12531	247 aa		6.67	□□□□□ -1.34
MSL5	YLR116W	GYP1	Q08484	637 aa		6.67	□□□□□ -1.34
MSL5	YLR116W	SAS4	Q04003	481 aa		6.63	□□□□□ -1.35
MSL5	YLR116W	YPR148C	Q06523	435 aa		6.63	□□□□□ -1.35
MSL5	YLR116W	PDR1	P12383	1068 aa		6.62	□□□□□ -1.35
MSL5	YLR116W	REF2	P42073	533 aa	Predicted RBP	6.62	□□□□□ -1.35
MSL5	YLR116W	PEX21	P50091	288 aa		6.62	□□□□□ -1.35
MSL5	YLR116W	YDR090C	Q03193	310 aa		6.62	□□□□□ -1.35
MSL5	YLR116W	SRC1	Q03707	834 aa		6.6	□□□□□ -1.35
MSL5	YLR116W	RAS1	P01119	309 aa		6.58	□□□□□ -1.36
MSL5	YLR116W	AMS1	P22855	1083 aa		6.58	□□□□□ -1.36
MSL5	YLR116W	CSC1	Q06538	782 aa		6.58	□□□□□ -1.36
MSL5	YLR116W	TFB4	Q12004	338 aa		6.57	□□□□□ -1.36
MSL5	YLR116W	YRR1	Q12172	810 aa		6.57	□□□□□ -1.36
MSL5	YLR116W	MAK21	Q12176	1025 aa	Known RBP	6.56	□□□□□ -1.36
MSL5	YLR116W	MRF1	P30775	413 aa	Predicted RBP	6.55	□□□□□ -1.36
MSL5	YLR116W	VPS70	P47161	811 aa		6.55	□□□□□ -1.36
MSL5	YLR116W	YEL077C	Q3E7X8	1277 aa		6.55	□□□□□ -1.36
MSL5	YLR116W	GAP1	P19145	602 aa	Predicted RBP	6.54	□□□□□ -1.36
MSL5	YLR116W	TUM1	Q08686	304 aa	Known RBP	6.52	□□□□□ -1.37
MSL5	YLR116W	COX6	P00427	148 aa		6.51	□□□□□ -1.37
MSL5	YLR116W	PRT1	P06103	763 aa	Known RBP	6.51	□□□□□ -1.37
MSL5	YLR116W	NPL4	P33755	580 aa		6.5	□□□□□ -1.37
MSL5	YLR116W	ORC6	P38826	435 aa		6.5	□□□□□ -1.37
MSL5	YLR116W	BUD20	Q08004	166 aa	Predicted RBP	6.5	□□□□□ -1.37
MSL5	YLR116W	TRK1	P12685	1235 aa		6.5	□□□□□ -1.37
MSL5	YLR116W	SDH2	P21801	266 aa		6.5	□□□□□ -1.37
MSL5	YLR116W	NUD1	P32336	851 aa		6.5	□□□□□ -1.37
MSL5	YLR116W	STR2	P47164	639 aa		6.49	□□□□□ -1.37
MSL5	YLR116W	ISM1	P48526	1002 aa		6.47	□□□□□ -1.37
MSL5	YLR116W	ERG12	P07277	443 aa		6.46	□□□□□ -1.38
MSL5	YLR116W	MVP1	P40959	511 aa	Known RBP	6.44	□□□□□ -1.38
MSL5	YLR116W	CKB1	P43639	278 aa		6.43	□□□□□ -1.38
MSL5	YLR116W	GCD11	P32481	527 aa	Known RBP	6.42	□□□□□ -1.38
MSL5	YLR116W	SPT16	P32558	1035 aa	Known RBP	6.42	□□□□□ -1.38
MSL5	YLR116W	RGR1	P19263	1082 aa		6.4	□□□□□ -1.39
MSL5	YLR116W	YPR109W	Q06104	294 aa		6.4	□□□□□ -1.39
MSL5	YLR116W	PBS2	P08018	668 aa		6.39	□□□□□ -1.39
MSL5	YLR116W	PAT1	P25644	796 aa	Known RBP	6.39	□□□□□ -1.39
MSL5	YLR116W	TY1A-DR4	O74302	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-H	P0C2I4	478 aa	Known RBP	6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-A	P0CX57	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-PR1	P0CX58	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-OR	P0CX59	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-PR2	P0CX60	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-DR5	P0CX65	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-ER2	P0CX66	440 aa		6.38	□□□□□ -1.39
MSL5	YLR116W	TY1A-GR3	P0CX67	440 aa		6.38	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms