RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W NOP53Q12080 455 aaKnown RBP2.46□□□□□ -2.02
PRP16YKR086W PTC4P38089 393 aa2.45□□□□□ -2.02
PRP16YKR086W GYP5Q12344 894 aa2.45□□□□□ -2.02
PRP16YKR086W ABP1P15891 592 aaKnown RBP2.45□□□□□ -2.02
PRP16YKR086W GUT1P32190 709 aa2.44□□□□□ -2.02
PRP16YKR086W JIP4Q03361 876 aa2.44□□□□□ -2.02
PRP16YKR086W MIF2P35201 549 aa2.43□□□□□ -2.02
PRP16YKR086W HTA1P04911 132 aaKnown RBP2.43□□□□□ -2.02
PRP16YKR086W HTA2P04912 132 aa2.43□□□□□ -2.02
PRP16YKR086W MPH3P0CE00 602 aa2.43□□□□□ -2.02
PRP16YKR086W DCW1P36091 449 aa2.43□□□□□ -2.02
PRP16YKR086W YGR273CP53329 174 aa2.43□□□□□ -2.02
PRP16YKR086W NCR1Q12200 1170 aa2.43□□□□□ -2.02
PRP16YKR086W AI4P03878 556 aa2.42□□□□□ -2.02
PRP16YKR086W YPR148CQ06523 435 aa2.42□□□□□ -2.02
PRP16YKR086W GRE2Q12068 342 aaKnown RBP2.42□□□□□ -2.02
PRP16YKR086W UBP14P38237 781 aaKnown RBP2.42□□□□□ -2.02
PRP16YKR086W MON2P48563 1636 aaPredicted RBP2.41□□□□□ -2.02
PRP16YKR086W YDR090CQ03193 310 aa2.41□□□□□ -2.02
PRP16YKR086W MID1P41821 548 aa2.4□□□□□ -2.02
PRP16YKR086W BMT6Q12291 365 aa2.4□□□□□ -2.02
PRP16YKR086W YDL129WQ07555 291 aa2.4□□□□□ -2.03
PRP16YKR086W SET1P38827 1080 aaKnown RBP2.4□□□□□ -2.03
PRP16YKR086W YLR326WQ06170 240 aaKnown RBP2.4□□□□□ -2.03
PRP16YKR086W GAP1P19145 602 aaPredicted RBP2.39□□□□□ -2.03
PRP16YKR086W RAM1P22007 431 aa2.39□□□□□ -2.03
PRP16YKR086W SLI15P38283 698 aa2.39□□□□□ -2.03
PRP16YKR086W PML39Q03760 334 aa2.38□□□□□ -2.03
PRP16YKR086W KEX1P09620 729 aa2.38□□□□□ -2.03
PRP16YKR086W SPB4P25808 606 aaPredicted RBP2.38□□□□□ -2.03
PRP16YKR086W PCS60P38137 543 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
PRP16YKR086W SAP30P38429 201 aa2.38□□□□□ -2.03
PRP16YKR086W PRE3P38624 215 aa2.38□□□□□ -2.03
PRP16YKR086W ATH1P48016 1211 aa2.38□□□□□ -2.03
PRP16YKR086W ARH1P48360 493 aa2.38□□□□□ -2.03
PRP16YKR086W YPR015CQ12531 247 aa2.37□□□□□ -2.03
PRP16YKR086W MPC54Q08550 464 aa2.37□□□□□ -2.03
PRP16YKR086W SAS10Q12136 610 aaPredicted RBP2.37□□□□□ -2.03
PRP16YKR086W CHL1P22516 861 aaPredicted RBP2.36□□□□□ -2.03
PRP16YKR086W SDH2P21801 266 aa2.35□□□□□ -2.03
PRP16YKR086W YJL171CP46992 396 aa2.35□□□□□ -2.03
PRP16YKR086W VPS70P47161 811 aa2.35□□□□□ -2.03
PRP16YKR086W PEX29Q03370 554 aa2.34□□□□□ -2.04
PRP16YKR086W TFG1P41895 735 aaPredicted RBP2.33□□□□□ -2.04
PRP16YKR086W BNI4P53858 892 aa2.33□□□□□ -2.04
PRP16YKR086W YML082WQ04533 649 aaKnown RBP2.33□□□□□ -2.04
PRP16YKR086W CDC73Q06697 393 aa2.33□□□□□ -2.04
PRP16YKR086W ORC6P38826 435 aa2.32□□□□□ -2.04
PRP16YKR086W KIC1P38692 1080 aa2.32□□□□□ -2.04
PRP16YKR086W VHR2P40041 505 aa2.32□□□□□ -2.04
PRP16YKR086W SRC1Q03707 834 aa2.32□□□□□ -2.04
PRP16YKR086W NMA111P53920 997 aa2.32□□□□□ -2.04
PRP16YKR086W BCK2P33306 851 aa2.31□□□□□ -2.04
PRP16YKR086W HAP5Q02516 242 aa2.31□□□□□ -2.04
PRP16YKR086W DPL1Q05567 589 aa2.31□□□□□ -2.04
PRP16YKR086W COX6P00427 148 aa2.3□□□□□ -2.04
PRP16YKR086W PDR1P12383 1068 aa2.3□□□□□ -2.04
PRP16YKR086W XDJ1P39102 459 aa2.3□□□□□ -2.04
PRP16YKR086W IFH1P39520 1085 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-DR4O74302 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-HP0C2I4 478 aaKnown RBP2.29□□□□□ -2.04
PRP16YKR086W TY1A-AP0CX57 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-PR1P0CX58 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-ORP0CX59 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-PR2P0CX60 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-DR5P0CX65 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-ER2P0CX66 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-GR3P0CX67 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-LR1P0CX68 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-MR2P0CX69 440 aa2.29□□□□□ -2.04
PRP16YKR086W SEC2P17065 759 aa2.29□□□□□ -2.04
PRP16YKR086W SPT23P35210 1082 aa2.29□□□□□ -2.04
PRP16YKR086W VRP1P37370 817 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-JR2P47099 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-DR1Q03856 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-ML1Q04706 440 aaKnown RBP2.29□□□□□ -2.04
PRP16YKR086W TY1A-BRQ12217 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-NL2Q12470 440 aa2.29□□□□□ -2.04
PRP16YKR086W TY1A-GR2Q12485 440 aa2.29□□□□□ -2.04
PRP16YKR086W STR2P47164 639 aa2.29□□□□□ -2.04
PRP16YKR086W REF2P42073 533 aaPredicted RBP2.28□□□□□ -2.04
PRP16YKR086W DSF2P38213 736 aa2.28□□□□□ -2.04
PRP16YKR086W NUP42P49686 430 aaKnown RBP2.28□□□□□ -2.04
PRP16YKR086W ISU2Q12056 156 aa2.28□□□□□ -2.04
PRP16YKR086W RGR1P19263 1082 aa2.27□□□□□ -2.05
PRP16YKR086W MVP1P40959 511 aaKnown RBP2.27□□□□□ -2.05
PRP16YKR086W BUD20Q08004 166 aaPredicted RBP2.27□□□□□ -2.05
PRP16YKR086W RAD54P32863 898 aa2.27□□□□□ -2.05
PRP16YKR086W ELP4Q02884 456 aaKnown RBP2.26□□□□□ -2.05
PRP16YKR086W PEX21P50091 288 aa2.26□□□□□ -2.05
PRP16YKR086W AGE1Q04412 482 aa2.25□□□□□ -2.05
PRP16YKR086W MAK21Q12176 1025 aaKnown RBP2.25□□□□□ -2.05
PRP16YKR086W RPP1BP10622 106 aaKnown RBP2.25□□□□□ -2.05
PRP16YKR086W ISM1P48526 1002 aa2.25□□□□□ -2.05
PRP16YKR086W RAS1P01119 309 aa2.24□□□□□ -2.05
PRP16YKR086W PTC2P39966 464 aaKnown RBP2.24□□□□□ -2.05
PRP16YKR086W ATF2P53296 535 aa2.24□□□□□ -2.05
PRP16YKR086W CSC1Q06538 782 aa2.24□□□□□ -2.05
PRP16YKR086W PBS2P08018 668 aa2.23□□□□□ -2.05
PRP16YKR086W ERF2Q06551 359 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms