RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	REF2	P42073	533 aa	Predicted RBP	14.55	□□□□□ -0.08
CSM2	YIL132C	SPB4	P25808	606 aa	Predicted RBP	14.53	□□□□□ -0.08
CSM2	YIL132C	ULI1	P43604	169 aa		14.51	□□□□□ -0.09
CSM2	YIL132C	YGR273C	P53329	174 aa		14.51	□□□□□ -0.09
CSM2	YIL132C	SOL3	P38858	249 aa		14.5	□□□□□ -0.09
CSM2	YIL132C	TRP5	P00931	707 aa	Known RBP	14.48	□□□□□ -0.09
CSM2	YIL132C	PBS2	P08018	668 aa		14.47	□□□□□ -0.09
CSM2	YIL132C	LEU3	P08638	886 aa		14.45	□□□□□ -0.1
CSM2	YIL132C	NST1	P53935	1240 aa		14.43	□□□□□ -0.1
CSM2	YIL132C	UBP14	P38237	781 aa	Known RBP	14.42	□□□□□ -0.1
CSM2	YIL132C	YEL023C	P39992	682 aa		14.42	□□□□□ -0.1
CSM2	YIL132C	VHR2	P40041	505 aa		14.42	□□□□□ -0.1
CSM2	YIL132C	DSF2	P38213	736 aa		14.41	□□□□□ -0.1
CSM2	YIL132C	IOC2	Q12072	812 aa		14.41	□□□□□ -0.1
CSM2	YIL132C	YLR326W	Q06170	240 aa	Known RBP	14.37	□□□□□ -0.11
CSM2	YIL132C	MAK21	Q12176	1025 aa	Known RBP	14.37	□□□□□ -0.11
CSM2	YIL132C	PTC4	P38089	393 aa		14.36	□□□□□ -0.11
CSM2	YIL132C	JIP4	Q03361	876 aa		14.35	□□□□□ -0.11
CSM2	YIL132C	KEX1	P09620	729 aa		14.34	□□□□□ -0.11
CSM2	YIL132C	MPH3	P0CE00	602 aa		14.34	□□□□□ -0.11
CSM2	YIL132C	COX6	P00427	148 aa		14.33	□□□□□ -0.12
CSM2	YIL132C	AI4	P03878	556 aa		14.33	□□□□□ -0.12
CSM2	YIL132C	YDR090C	Q03193	310 aa		14.32	□□□□□ -0.12
CSM2	YIL132C	LDB19	Q12502	818 aa		14.31	□□□□□ -0.12
CSM2	YIL132C	YNL035C	P53962	389 aa	Known RBP	14.3	□□□□□ -0.12
CSM2	YIL132C	MAM3	Q12296	706 aa		14.29	□□□□□ -0.12
CSM2	YIL132C	ILV3	P39522	585 aa	Known RBP	14.27	□□□□□ -0.13
CSM2	YIL132C	DAN4	P47179	1161 aa		14.27	□□□□□ -0.13
CSM2	YIL132C	RAD54	P32863	898 aa		14.25	□□□□□ -0.13
CSM2	YIL132C	RTG1	P32607	177 aa		14.24	□□□□□ -0.13
CSM2	YIL132C	KIC1	P38692	1080 aa		14.24	□□□□□ -0.13
CSM2	YIL132C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	14.23	□□□□□ -0.13	not detected
CSM2	YIL132C	SEC61	P32915	480 aa		14.19	□□□□□ -0.14
CSM2	YIL132C	IES2	P40154	320 aa		14.19	□□□□□ -0.14
CSM2	YIL132C	LEO1	P38439	464 aa		14.18	□□□□□ -0.14
CSM2	YIL132C	SLI15	P38283	698 aa		14.12	□□□□□ -0.15
CSM2	YIL132C	NUP42	P49686	430 aa	Known RBP	14.12	□□□□□ -0.15
CSM2	YIL132C	NCR1	Q12200	1170 aa		14.12	□□□□□ -0.15
CSM2	YIL132C	FKH1	P40466	484 aa		14.11	□□□□□ -0.15
CSM2	YIL132C	RPN1	P38764	993 aa	Known RBP	14.1	□□□□□ -0.15
CSM2	YIL132C	SIS1	P25294	352 aa	Known RBP	14.09	□□□□□ -0.15
CSM2	YIL132C	DIT2	P21595	489 aa		14.08	□□□□□ -0.16
CSM2	YIL132C	TFG1	P41895	735 aa	Predicted RBP	14.08	□□□□□ -0.16
CSM2	YIL132C	PML39	Q03760	334 aa		14.08	□□□□□ -0.16
CSM2	YIL132C	YNR021W	P53723	404 aa	Known RBP	14.06	□□□□□ -0.16
CSM2	YIL132C	MID1	P41821	548 aa		14.03	□□□□□ -0.16
CSM2	YIL132C	AIR2	Q12476	344 aa	Known RBP	14.01	□□□□□ -0.17
CSM2	YIL132C	YDL129W	Q07555	291 aa		14	□□□□□ -0.17
CSM2	YIL132C	ORC6	P38826	435 aa		13.99	□□□□□ -0.17
CSM2	YIL132C	RPP1B	P10622	106 aa	Known RBP	13.97	□□□□□ -0.17
CSM2	YIL132C	CDC73	Q06697	393 aa		13.95	□□□□□ -0.18
CSM2	YIL132C	PSE1	P32337	1089 aa	Known RBP	13.94	□□□□□ -0.18
CSM2	YIL132C	GLC3	P32775	704 aa		13.94	□□□□□ -0.18
CSM2	YIL132C	PEX29	Q03370	554 aa		13.91	□□□□□ -0.18
CSM2	YIL132C	MPC54	Q08550	464 aa		13.91	□□□□□ -0.18
CSM2	YIL132C	DPL1	Q05567	589 aa		13.9	□□□□□ -0.18
CSM2	YIL132C	SAP30	P38429	201 aa		13.89	□□□□□ -0.19
CSM2	YIL132C	GAP1	P19145	602 aa	Predicted RBP	13.88	□□□□□ -0.19
CSM2	YIL132C	CSC1	Q06538	782 aa		13.88	□□□□□ -0.19
CSM2	YIL132C	AIM7	Q12156	149 aa		13.88	□□□□□ -0.19
CSM2	YIL132C	ATF2	P53296	535 aa		13.87	□□□□□ -0.19
CSM2	YIL132C	RGR1	P19263	1082 aa		13.84	□□□□□ -0.19
CSM2	YIL132C	MVP1	P40959	511 aa	Known RBP	13.84	□□□□□ -0.19
CSM2	YIL132C	YJL171C	P46992	396 aa		13.82	□□□□□ -0.2
CSM2	YIL132C	TFB4	Q12004	338 aa		13.81	□□□□□ -0.2
CSM2	YIL132C	KIN1	P13185	1064 aa		13.8	□□□□□ -0.2
CSM2	YIL132C	NMA111	P53920	997 aa		13.8	□□□□□ -0.2
CSM2	YIL132C	BMT6	Q12291	365 aa		13.8	□□□□□ -0.2
CSM2	YIL132C	PEX21	P50091	288 aa		13.79	□□□□□ -0.2
CSM2	YIL132C	ISU2	Q12056	156 aa		13.79	□□□□□ -0.2
CSM2	YIL132C	ARH1	P48360	493 aa		13.75	□□□□□ -0.21
CSM2	YIL132C	YPR109W	Q06104	294 aa		13.73	□□□□□ -0.21
CSM2	YIL132C	CLB5	P30283	435 aa		13.72	□□□□□ -0.21
CSM2	YIL132C	TEA1	P47988	759 aa		13.72	□□□□□ -0.21
CSM2	YIL132C	HAP5	Q02516	242 aa		13.71	□□□□□ -0.21
CSM2	YIL132C	YDR344C	Q05510	147 aa		13.71	□□□□□ -0.21
CSM2	YIL132C	TUM1	Q08686	304 aa	Known RBP	13.71	□□□□□ -0.21
CSM2	YIL132C	ELP4	Q02884	456 aa	Known RBP	13.68	□□□□□ -0.22
CSM2	YIL132C	YRR1	Q12172	810 aa		13.67	□□□□□ -0.22
CSM2	YIL132C	PRE3	P38624	215 aa		13.61	□□□□□ -0.23
CSM2	YIL132C	BNI4	P53858	892 aa		13.59	□□□□□ -0.23
CSM2	YIL132C	SPT23	P35210	1082 aa		13.58	□□□□□ -0.24
CSM2	YIL132C	CHL1	P22516	861 aa	Predicted RBP	13.56	□□□□□ -0.24
CSM2	YIL132C	PDR1	P12383	1068 aa		13.55	□□□□□ -0.24
CSM2	YIL132C	NIS1	P53939	407 aa		13.54	□□□□□ -0.24
CSM2	YIL132C	GUA1	P38625	525 aa	Known RBP	13.52	□□□□□ -0.25
CSM2	YIL132C	NUD1	P32336	851 aa		13.5	□□□□□ -0.25
CSM2	YIL132C	PTC2	P39966	464 aa	Known RBP	13.49	□□□□□ -0.25
CSM2	YIL132C	FPK1	P53739	893 aa		13.49	□□□□□ -0.25
CSM2	YIL132C	CSN12	P47130	423 aa		13.48	□□□□□ -0.25
CSM2	YIL132C	YMR196W	Q04336	1088 aa		13.48	□□□□□ -0.25
CSM2	YIL132C	SIT4	P20604	311 aa		13.47	□□□□□ -0.25
CSM2	YIL132C	RAM1	P22007	431 aa		13.45	□□□□□ -0.26
CSM2	YIL132C	NPL4	P33755	580 aa		13.44	□□□□□ -0.26
CSM2	YIL132C	HST2	P53686	357 aa		13.43	□□□□□ -0.26
CSM2	YIL132C	YML082W	Q04533	649 aa	Known RBP	13.43	□□□□□ -0.26
CSM2	YIL132C	DMA2	P53924	522 aa		13.42	□□□□□ -0.26
CSM2	YIL132C	ISM1	P48526	1002 aa		13.41	□□□□□ -0.26
CSM2	YIL132C	SSA2	P10592	639 aa	Known RBP	13.4	□□□□□ -0.26
CSM2	YIL132C	STR2	P47164	639 aa		13.4	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 416.2 ms