RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C HTA2P04912 132 aa10.14□□□□□ -0.79
SPO16YHR153C YDL129WQ07555 291 aa10.14□□□□□ -0.79
SPO16YHR153C DMA1P38823 416 aa10.12□□□□□ -0.79
SPO16YHR153C PTC4P38089 393 aa10.1□□□□□ -0.79
SPO16YHR153C DCW1P36091 449 aa10.09□□□□□ -0.79
SPO16YHR153C PRE3P38624 215 aa10.09□□□□□ -0.79
SPO16YHR153C YEL023CP39992 682 aa10.07□□□□□ -0.8
SPO16YHR153C GRE2Q12068 342 aaKnown RBP9.96□□□□□ -0.82
SPO16YHR153C VRP1P37370 817 aa9.94□□□□□ -0.82
SPO16YHR153C XDJ1P39102 459 aa9.94□□□□□ -0.82
SPO16YHR153C MAK11P20484 414 aaKnown RBP9.91□□□□□ -0.82
SPO16YHR153C GUT1P32190 709 aa9.87□□□□□ -0.83
SPO16YHR153C EDS1P38073 919 aa9.87□□□□□ -0.83
SPO16YHR153C PML39Q03760 334 aa9.87□□□□□ -0.83
SPO16YHR153C YDR344CQ05510 147 aa9.87□□□□□ -0.83
SPO16YHR153C RAM2P29703 316 aa9.86□□□□□ -0.83
SPO16YHR153C PTC3P34221 468 aaKnown RBP9.85□□□□□ -0.83
SPO16YHR153C MIF2P35201 549 aa9.85□□□□□ -0.83
SPO16YHR153C ATH1P48016 1211 aa9.84□□□□□ -0.83
SPO16YHR153C NST1P53935 1240 aa9.84□□□□□ -0.83
SPO16YHR153C ELP4Q02884 456 aaKnown RBP9.82□□□□□ -0.84
SPO16YHR153C DPS1P04802 557 aaKnown RBP9.81□□□□□ -0.84
SPO16YHR153C ARH1P48360 493 aa9.78□□□□□ -0.84
SPO16YHR153C COQ8P27697 501 aa9.75□□□□□ -0.85
SPO16YHR153C SOL3P38858 249 aa9.75□□□□□ -0.85
SPO16YHR153C MID1P41821 548 aa9.72□□□□□ -0.85
SPO16YHR153C AI4P03878 556 aa9.71□□□□□ -0.86
SPO16YHR153C MPH3P0CE00 602 aa9.71□□□□□ -0.86
SPO16YHR153C RGA2Q06407 1009 aa9.68□□□□□ -0.86
SPO16YHR153C SPT23P35210 1082 aa9.66□□□□□ -0.86
SPO16YHR153C NOP53Q12080 455 aaKnown RBP9.65□□□□□ -0.86
SPO16YHR153C ILV3P39522 585 aaKnown RBP9.64□□□□□ -0.87
SPO16YHR153C SAS10Q12136 610 aaPredicted RBP9.64□□□□□ -0.87
SPO16YHR153C PEX29Q03370 554 aa9.61□□□□□ -0.87
SPO16YHR153C HAP5Q02516 242 aa9.59□□□□□ -0.87
SPO16YHR153C YGR273CP53329 174 aa9.58□□□□□ -0.88
SPO16YHR153C BNI4P53858 892 aa9.58□□□□□ -0.88
SPO16YHR153C SRC1Q03707 834 aa9.58□□□□□ -0.88
SPO16YHR153C YML082WQ04533 649 aaKnown RBP9.55□□□□□ -0.88
SPO16YHR153C SET1P38827 1080 aaKnown RBP9.54□□□□□ -0.88
SPO16YHR153C IFH1P39520 1085 aa9.53□□□□□ -0.88
SPO16YHR153C MPC54Q08550 464 aa9.53□□□□□ -0.88
SPO16YHR153C RGA1P39083 1007 aa9.5□□□□□ -0.89
SPO16YHR153C PTC2P39966 464 aaKnown RBP9.48□□□□□ -0.89
SPO16YHR153C SLI15P38283 698 aa9.45□□□□□ -0.9
SPO16YHR153C NMA111P53920 997 aa9.44□□□□□ -0.9
SPO16YHR153C YPR148CQ06523 435 aa9.44□□□□□ -0.9
SPO16YHR153C DPL1Q05567 589 aa9.42□□□□□ -0.9
SPO16YHR153C CKB1P43639 278 aa9.4□□□□□ -0.9
SPO16YHR153C LEU3P08638 886 aa9.39□□□□□ -0.91
SPO16YHR153C KEX1P09620 729 aa9.34□□□□□ -0.91
SPO16YHR153C VPS70P47161 811 aa9.34□□□□□ -0.91
SPO16YHR153C YPR015CQ12531 247 aa9.33□□□□□ -0.92
SPO16YHR153C RAM1P22007 431 aa9.32□□□□□ -0.92
SPO16YHR153C ISU2Q12056 156 aa9.32□□□□□ -0.92
SPO16YHR153C LEO1P38439 464 aa9.31□□□□□ -0.92
SPO16YHR153C RAS1P01119 309 aa9.3□□□□□ -0.92
SPO16YHR153C UBP14P38237 781 aaKnown RBP9.24□□□□□ -0.93
SPO16YHR153C YLR326WQ06170 240 aaKnown RBP9.24□□□□□ -0.93
SPO16YHR153C CDC73Q06697 393 aa9.24□□□□□ -0.93
SPO16YHR153C SPB4P25808 606 aaPredicted RBP9.23□□□□□ -0.93
SPO16YHR153C AMS1P22855 1083 aa9.17□□□□□ -0.94
SPO16YHR153C REF2P42073 533 aaPredicted RBP9.17□□□□□ -0.94
SPO16YHR153C PBS2P08018 668 aa9.16□□□□□ -0.94
SPO16YHR153C PCS60P38137 543 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
SPO16YHR153C DSF2P38213 736 aa9.16□□□□□ -0.94
SPO16YHR153C PDR1P12383 1068 aa9.15□□□□□ -0.94
SPO16YHR153C VHR2P40041 505 aa9.15□□□□□ -0.94
SPO16YHR153C SAS4Q04003 481 aa9.15□□□□□ -0.94
SPO16YHR153C GYP1Q08484 637 aa9.15□□□□□ -0.94
SPO16YHR153C TRK1P12685 1235 aa9.14□□□□□ -0.95
SPO16YHR153C SDH2P21801 266 aa9.13□□□□□ -0.95
SPO16YHR153C MAK21Q12176 1025 aaKnown RBP9.13□□□□□ -0.95
SPO16YHR153C RAD54P32863 898 aa9.12□□□□□ -0.95
SPO16YHR153C RPN1P38764 993 aaKnown RBP9.12□□□□□ -0.95
SPO16YHR153C RPP1BP10622 106 aaKnown RBP9.09□□□□□ -0.95
SPO16YHR153C MAM3Q12296 706 aa9.06□□□□□ -0.96
SPO16YHR153C YDR090CQ03193 310 aa9.04□□□□□ -0.96
SPO16YHR153C COX6P00427 148 aa9.03□□□□□ -0.96
SPO16YHR153C YEL077CQ3E7X8 1277 aa9.02□□□□□ -0.97
SPO16YHR153C GAP1P19145 602 aaPredicted RBP9.01□□□□□ -0.97
SPO16YHR153C BUD20Q08004 166 aaPredicted RBP9□□□□□ -0.97
SPO16YHR153C YNR021WP53723 404 aaKnown RBP8.99□□□□□ -0.97
SPO16YHR153C MRF1P30775 413 aaPredicted RBP8.98□□□□□ -0.97
SPO16YHR153C KIC1P38692 1080 aa8.97□□□□□ -0.97
SPO16YHR153C IES2P40154 320 aa8.97□□□□□ -0.97
SPO16YHR153C PRT1P06103 763 aaKnown RBP8.95□□□□□ -0.98
SPO16YHR153C YPL062WQ02781 134 aa8.95□□□□□ -0.98
SPO16YHR153C TFB4Q12004 338 aa8.95□□□□□ -0.98
SPO16YHR153C YRR1Q12172 810 aa8.95□□□□□ -0.98
SPO16YHR153C STR2P47164 639 aa8.94□□□□□ -0.98
SPO16YHR153C TAF7Q05021 590 aa8.94□□□□□ -0.98
SPO16YHR153C CSC1Q06538 782 aa8.94□□□□□ -0.98
SPO16YHR153C PEX21P50091 288 aa8.92□□□□□ -0.98
SPO16YHR153C ISM1P48526 1002 aa8.91□□□□□ -0.98
SPO16YHR153C NUP42P49686 430 aaKnown RBP8.91□□□□□ -0.98
SPO16YHR153C AIM7Q12156 149 aa8.91□□□□□ -0.98
SPO16YHR153C NUD1P32336 851 aa8.87□□□□□ -0.99
SPO16YHR153C TUM1Q08686 304 aaKnown RBP8.87□□□□□ -0.99
SPO16YHR153C ORC6P38826 435 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms