RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeastyeast

Gene YPT35, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT35YHR105W YJL171CP46992 396 aa7.44□□□□□ -1.22
YPT35YHR105W YNL035CP53962 389 aaKnown RBP7.44□□□□□ -1.22
YPT35YHR105W SET1P38827 1080 aaKnown RBP7.43□□□□□ -1.22
YPT35YHR105W GUT1P32190 709 aa7.42□□□□□ -1.22
YPT35YHR105W NOP53Q12080 455 aaKnown RBP7.42□□□□□ -1.22
YPT35YHR105W JIP4Q03361 876 aa7.41□□□□□ -1.22
YPT35YHR105W SEC61P32915 480 aa7.4□□□□□ -1.22
YPT35YHR105W YEL023CP39992 682 aa7.4□□□□□ -1.22
YPT35YHR105W NCR1Q12200 1170 aa7.4□□□□□ -1.22
YPT35YHR105W SAS10Q12136 610 aaPredicted RBP7.39□□□□□ -1.23
YPT35YHR105W PTC4P38089 393 aa7.38□□□□□ -1.23
YPT35YHR105W TFG1P41895 735 aaPredicted RBP7.37□□□□□ -1.23
YPT35YHR105W DAN4P47179 1161 aa7.37□□□□□ -1.23
YPT35YHR105W BMT6Q12291 365 aa7.36□□□□□ -1.23
YPT35YHR105W TAF7Q05021 590 aa7.33□□□□□ -1.24
YPT35YHR105W YPR148CQ06523 435 aa7.3□□□□□ -1.24
YPT35YHR105W SOL3P38858 249 aa7.29□□□□□ -1.24
YPT35YHR105W LEO1P38439 464 aa7.28□□□□□ -1.24
YPT35YHR105W VPS70P47161 811 aa7.27□□□□□ -1.25
YPT35YHR105W YGR273CP53329 174 aa7.27□□□□□ -1.25
YPT35YHR105W NST1P53935 1240 aa7.27□□□□□ -1.25
YPT35YHR105W YDL129WQ07555 291 aa7.27□□□□□ -1.25
YPT35YHR105W SAP30P38429 201 aa7.26□□□□□ -1.25
YPT35YHR105W IFH1P39520 1085 aa7.26□□□□□ -1.25
YPT35YHR105W AI4P03878 556 aa7.25□□□□□ -1.25
YPT35YHR105W PML39Q03760 334 aa7.25□□□□□ -1.25
YPT35YHR105W MPH3P0CE00 602 aa7.24□□□□□ -1.25
YPT35YHR105W LEU3P08638 886 aa7.18□□□□□ -1.26
YPT35YHR105W ILV3P39522 585 aaKnown RBP7.18□□□□□ -1.26
YPT35YHR105W MID1P41821 548 aa7.18□□□□□ -1.26
YPT35YHR105W KEX1P09620 729 aa7.15□□□□□ -1.26
YPT35YHR105W VHR2P40041 505 aa7.15□□□□□ -1.26
YPT35YHR105W CKB1P43639 278 aa7.15□□□□□ -1.26
YPT35YHR105W PEX29Q03370 554 aa7.15□□□□□ -1.26
YPT35YHR105W UBP14P38237 781 aaKnown RBP7.13□□□□□ -1.27
YPT35YHR105W PRE3P38624 215 aa7.13□□□□□ -1.27
YPT35YHR105W YLR326WQ06170 240 aaKnown RBP7.13□□□□□ -1.27
YPT35YHR105W CHL1P22516 861 aaPredicted RBP7.12□□□□□ -1.27
YPT35YHR105W SLI15P38283 698 aa7.11□□□□□ -1.27
YPT35YHR105W ELP4Q02884 456 aaKnown RBP7.11□□□□□ -1.27
YPT35YHR105W SPB4P25808 606 aaPredicted RBP7.1□□□□□ -1.27
YPT35YHR105W REF2P42073 533 aaPredicted RBP7.1□□□□□ -1.27
YPT35YHR105W ARH1P48360 493 aa7.09□□□□□ -1.27
YPT35YHR105W PBS2P08018 668 aa7.08□□□□□ -1.28
YPT35YHR105W RAD54P32863 898 aa7.08□□□□□ -1.28
YPT35YHR105W YDR344CQ05510 147 aa7.08□□□□□ -1.28
YPT35YHR105W PCS60P38137 543 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
YPT35YHR105W MPC54Q08550 464 aa7.07□□□□□ -1.28
YPT35YHR105W KIC1P38692 1080 aa7.06□□□□□ -1.28
YPT35YHR105W DSF2P38213 736 aa7.05□□□□□ -1.28
YPT35YHR105W DPL1Q05567 589 aa7.05□□□□□ -1.28
YPT35YHR105W HAP5Q02516 242 aa7.04□□□□□ -1.28
YPT35YHR105W YDR090CQ03193 310 aa7.04□□□□□ -1.28
YPT35YHR105W NMA111P53920 997 aa7.03□□□□□ -1.28
YPT35YHR105W RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
YPT35YHR105W SPT23P35210 1082 aa7.01□□□□□ -1.29
YPT35YHR105W CDC73Q06697 393 aa7.01□□□□□ -1.29
YPT35YHR105W MAK21Q12176 1025 aaKnown RBP7.01□□□□□ -1.29
YPT35YHR105W COX6P00427 148 aa7□□□□□ -1.29
YPT35YHR105W BCK2P33306 851 aa7□□□□□ -1.29
YPT35YHR105W ISU2Q12056 156 aa6.98□□□□□ -1.29
YPT35YHR105W BNI4P53858 892 aa6.97□□□□□ -1.29
YPT35YHR105W MAM3Q12296 706 aa6.97□□□□□ -1.29
YPT35YHR105W VRP1P37370 817 aa6.96□□□□□ -1.3
YPT35YHR105W IES2P40154 320 aa6.96□□□□□ -1.3
YPT35YHR105W PTC2P39966 464 aaKnown RBP6.95□□□□□ -1.3
YPT35YHR105W NUP42P49686 430 aaKnown RBP6.95□□□□□ -1.3
YPT35YHR105W DIT2P21595 489 aa6.93□□□□□ -1.3
YPT35YHR105W RPN1P38764 993 aaKnown RBP6.92□□□□□ -1.3
YPT35YHR105W PEX21P50091 288 aa6.91□□□□□ -1.3
YPT35YHR105W YML082WQ04533 649 aaKnown RBP6.91□□□□□ -1.3
YPT35YHR105W CSC1Q06538 782 aa6.9□□□□□ -1.3
YPT35YHR105W ORC6P38826 435 aa6.89□□□□□ -1.31
YPT35YHR105W GAP1P19145 602 aaPredicted RBP6.87□□□□□ -1.31
YPT35YHR105W XDJ1P39102 459 aa6.87□□□□□ -1.31
YPT35YHR105W YNR021WP53723 404 aaKnown RBP6.87□□□□□ -1.31
YPT35YHR105W DMA2P53924 522 aa6.87□□□□□ -1.31
YPT35YHR105W TFB4Q12004 338 aa6.87□□□□□ -1.31
YPT35YHR105W YRR1Q12172 810 aa6.86□□□□□ -1.31
YPT35YHR105W PDR1P12383 1068 aa6.85□□□□□ -1.31
YPT35YHR105W GLC3P32775 704 aa6.85□□□□□ -1.31
YPT35YHR105W TUM1Q08686 304 aaKnown RBP6.85□□□□□ -1.31
YPT35YHR105W RAM1P22007 431 aa6.84□□□□□ -1.31
YPT35YHR105W MVP1P40959 511 aaKnown RBP6.83□□□□□ -1.32
YPT35YHR105W YPR015CQ12531 247 aa6.83□□□□□ -1.32
YPT35YHR105W RGR1P19263 1082 aa6.81□□□□□ -1.32
YPT35YHR105W PSE1P32337 1089 aaKnown RBP6.79□□□□□ -1.32
YPT35YHR105W YPR109WQ06104 294 aa6.78□□□□□ -1.32
YPT35YHR105W GYP1Q08484 637 aa6.78□□□□□ -1.32
YPT35YHR105W KIN1P13185 1064 aa6.77□□□□□ -1.33
YPT35YHR105W NUD1P32336 851 aa6.77□□□□□ -1.33
YPT35YHR105W NPL4P33755 580 aa6.76□□□□□ -1.33
YPT35YHR105W AIM7Q12156 149 aa6.76□□□□□ -1.33
YPT35YHR105W ATF2P53296 535 aa6.75□□□□□ -1.33
YPT35YHR105W STR2P47164 639 aa6.73□□□□□ -1.33
YPT35YHR105W ISM1P48526 1002 aa6.73□□□□□ -1.33
YPT35YHR105W SAS4Q04003 481 aa6.73□□□□□ -1.33
YPT35YHR105W BUD20Q08004 166 aaPredicted RBP6.73□□□□□ -1.33
YPT35YHR105W DPS1P04802 557 aaKnown RBP6.72□□□□□ -1.33
YPT35YHR105W PRT1P06103 763 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms