RNA–Protein interactions for RNA: YEL043W

YEL043W, Transcript of Predicted cytoskeleton protein involved in intracellular signaling, yeast

Gene YEL043W, Length 2,871 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEL043W	YEL043W	GRE2	Q12068	342 aa	Known RBP	4.62	□□□□□ -1.67
YEL043W	YEL043W	MAK11	P20484	414 aa	Known RBP	4.61	□□□□□ -1.67
YEL043W	YEL043W	SAP30	P38429	201 aa		4.6	□□□□□ -1.67
YEL043W	YEL043W	ATH1	P48016	1211 aa		4.6	□□□□□ -1.67
YEL043W	YEL043W	RAM2	P29703	316 aa		4.59	□□□□□ -1.67
YEL043W	YEL043W	YEL023C	P39992	682 aa		4.59	□□□□□ -1.67
YEL043W	YEL043W	YDL129W	Q07555	291 aa		4.59	□□□□□ -1.68
YEL043W	YEL043W	PTC4	P38089	393 aa		4.58	□□□□□ -1.68
YEL043W	YEL043W	PTC3	P34221	468 aa	Known RBP	4.56	□□□□□ -1.68
YEL043W	YEL043W	DAN4	P47179	1161 aa		4.56	□□□□□ -1.68
YEL043W	YEL043W	COQ8	P27697	501 aa		4.55	□□□□□ -1.68
YEL043W	YEL043W	GUT1	P32190	709 aa		4.55	□□□□□ -1.68
YEL043W	YEL043W	EDS1	P38073	919 aa		4.55	□□□□□ -1.68
YEL043W	YEL043W	CHL1	P22516	861 aa	Predicted RBP	4.51	□□□□□ -1.69
YEL043W	YEL043W	PML39	Q03760	334 aa		4.51	□□□□□ -1.69
YEL043W	YEL043W	ELP4	Q02884	456 aa	Known RBP	4.5	□□□□□ -1.69
YEL043W	YEL043W	PRE3	P38624	215 aa		4.5	□□□□□ -1.69
YEL043W	YEL043W	PEX29	Q03370	554 aa		4.5	□□□□□ -1.69
YEL043W	YEL043W	BCK2	P33306	851 aa		4.48	□□□□□ -1.69
YEL043W	YEL043W	NOP53	Q12080	455 aa	Known RBP	4.46	□□□□□ -1.7
YEL043W	YEL043W	TAF7	Q05021	590 aa		4.44	□□□□□ -1.7
YEL043W	YEL043W	AI4	P03878	556 aa		4.43	□□□□□ -1.7
YEL043W	YEL043W	MPH3	P0CE00	602 aa		4.43	□□□□□ -1.7
YEL043W	YEL043W	MID1	P41821	548 aa		4.43	□□□□□ -1.7
YEL043W	YEL043W	SOL3	P38858	249 aa		4.42	□□□□□ -1.7
YEL043W	YEL043W	YGR273C	P53329	174 aa		4.42	□□□□□ -1.7
YEL043W	YEL043W	VRP1	P37370	817 aa		4.41	□□□□□ -1.7
YEL043W	YEL043W	ARH1	P48360	493 aa		4.41	□□□□□ -1.7
YEL043W	YEL043W	INO80	P53115	1489 aa		4.4	□□□□□ -1.7
YEL043W	YEL043W	NST1	P53935	1240 aa		4.4	□□□□□ -1.71
YEL043W	YEL043W	SET1	P38827	1080 aa	Known RBP	4.39	□□□□□ -1.71
YEL043W	YEL043W	YDR344C	Q05510	147 aa		4.39	□□□□□ -1.71
YEL043W	YEL043W	ILV3	P39522	585 aa	Known RBP	4.39	□□□□□ -1.71
YEL043W	YEL043W	SPT23	P35210	1082 aa		4.39	□□□□□ -1.71
YEL043W	YEL043W	SPA2	P23201	1466 aa	Known RBP	4.38	□□□□□ -1.71
YEL043W	YEL043W	HAP5	Q02516	242 aa		4.38	□□□□□ -1.71
YEL043W	YEL043W	DMA1	P38823	416 aa		4.38	□□□□□ -1.71
YEL043W	YEL043W	XDJ1	P39102	459 aa		4.36	□□□□□ -1.71
YEL043W	YEL043W	PTC2	P39966	464 aa	Known RBP	4.35	□□□□□ -1.71
YEL043W	YEL043W	MPC54	Q08550	464 aa		4.35	□□□□□ -1.71
YEL043W	YEL043W	SLI15	P38283	698 aa		4.34	□□□□□ -1.72
YEL043W	YEL043W	BNI4	P53858	892 aa		4.34	□□□□□ -1.72
YEL043W	YEL043W	DPL1	Q05567	589 aa		4.34	□□□□□ -1.72
YEL043W	YEL043W	KEX1	P09620	729 aa		4.33	□□□□□ -1.72
YEL043W	YEL043W	NMA111	P53920	997 aa		4.33	□□□□□ -1.72
YEL043W	YEL043W	RPP1B	P10622	106 aa	Known RBP	4.32	□□□□□ -1.72
YEL043W	YEL043W	VHR2	P40041	505 aa		4.32	□□□□□ -1.72
YEL043W	YEL043W	IFH1	P39520	1085 aa		4.32	□□□□□ -1.72
YEL043W	YEL043W	RAD54	P32863	898 aa		4.31	□□□□□ -1.72
YEL043W	YEL043W	DPS1	P04802	557 aa	Known RBP	4.3	□□□□□ -1.72
YEL043W	YEL043W	KIC1	P38692	1080 aa		4.3	□□□□□ -1.72
YEL043W	YEL043W	ISU2	Q12056	156 aa		4.29	□□□□□ -1.72
YEL043W	YEL043W	YLR326W	Q06170	240 aa	Known RBP	4.29	□□□□□ -1.72
YEL043W	YEL043W	YML082W	Q04533	649 aa	Known RBP	4.28	□□□□□ -1.72
YEL043W	YEL043W	CDC73	Q06697	393 aa		4.28	□□□□□ -1.72
YEL043W	YEL043W	UBP14	P38237	781 aa	Known RBP	4.27	□□□□□ -1.73
YEL043W	YEL043W	KOG1	P38873	1557 aa		4.26	□□□□□ -1.73
YEL043W	YEL043W	DNA2	P38859	1522 aa		4.25	□□□□□ -1.73
YEL043W	YEL043W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
YEL043W	YEL043W	PEX21	P50091	288 aa		4.25	□□□□□ -1.73
YEL043W	YEL043W	GYP1	Q08484	637 aa		4.24	□□□□□ -1.73
YEL043W	YEL043W	REF2	P42073	533 aa	Predicted RBP	4.24	□□□□□ -1.73
YEL043W	YEL043W	VPS70	P47161	811 aa		4.23	□□□□□ -1.73
YEL043W	YEL043W	PDR1	P12383	1068 aa		4.2	□□□□□ -1.74
YEL043W	YEL043W	YPR015C	Q12531	247 aa		4.2	□□□□□ -1.74
YEL043W	YEL043W	YPR148C	Q06523	435 aa		4.19	□□□□□ -1.74
YEL043W	YEL043W	YRR1	Q12172	810 aa		4.19	□□□□□ -1.74
YEL043W	YEL043W	YDR090C	Q03193	310 aa		4.18	□□□□□ -1.74
YEL043W	YEL043W	CSC1	Q06538	782 aa		4.18	□□□□□ -1.74
YEL043W	YEL043W	SAS4	Q04003	481 aa		4.17	□□□□□ -1.74
YEL043W	YEL043W	TFB4	Q12004	338 aa		4.17	□□□□□ -1.74
YEL043W	YEL043W	MAK21	Q12176	1025 aa	Known RBP	4.17	□□□□□ -1.74
YEL043W	YEL043W	RAM1	P22007	431 aa		4.17	□□□□□ -1.74
YEL043W	YEL043W	NPL4	P33755	580 aa		4.17	□□□□□ -1.74
YEL043W	YEL043W	TUM1	Q08686	304 aa	Known RBP	4.16	□□□□□ -1.74
YEL043W	YEL043W	YEL077C	Q3E7X8	1277 aa		4.16	□□□□□ -1.74
YEL043W	YEL043W	RAS1	P01119	309 aa		4.14	□□□□□ -1.75
YEL043W	YEL043W	AMS1	P22855	1083 aa		4.14	□□□□□ -1.75
YEL043W	YEL043W	MRF1	P30775	413 aa	Predicted RBP	4.14	□□□□□ -1.75
YEL043W	YEL043W	NUD1	P32336	851 aa		4.13	□□□□□ -1.75
YEL043W	YEL043W	LEO1	P38439	464 aa		4.13	□□□□□ -1.75
YEL043W	YEL043W	COX6	P00427	148 aa		4.13	□□□□□ -1.75
YEL043W	YEL043W	PRT1	P06103	763 aa	Known RBP	4.13	□□□□□ -1.75
YEL043W	YEL043W	CKB1	P43639	278 aa		4.12	□□□□□ -1.75
YEL043W	YEL043W	ERG12	P07277	443 aa		4.12	□□□□□ -1.75
YEL043W	YEL043W	GCD11	P32481	527 aa	Known RBP	4.12	□□□□□ -1.75
YEL043W	YEL043W	ORC6	P38826	435 aa		4.12	□□□□□ -1.75
YEL043W	YEL043W	ISM1	P48526	1002 aa		4.11	□□□□□ -1.75
YEL043W	YEL043W	BUD20	Q08004	166 aa	Predicted RBP	4.11	□□□□□ -1.75
YEL043W	YEL043W	SRC1	Q03707	834 aa		4.1	□□□□□ -1.75
YEL043W	YEL043W	TRK1	P12685	1235 aa		4.1	□□□□□ -1.75
YEL043W	YEL043W	GAP1	P19145	602 aa	Predicted RBP	4.1	□□□□□ -1.75
YEL043W	YEL043W	STR2	P47164	639 aa		4.1	□□□□□ -1.75
YEL043W	YEL043W	YPR109W	Q06104	294 aa		4.1	□□□□□ -1.75
YEL043W	YEL043W	PBS2	P08018	668 aa		4.09	□□□□□ -1.75
YEL043W	YEL043W	SPT16	P32558	1035 aa	Known RBP	4.09	□□□□□ -1.75
YEL043W	YEL043W	PAT1	P25644	796 aa	Known RBP	4.08	□□□□□ -1.76
YEL043W	YEL043W	MVP1	P40959	511 aa	Known RBP	4.08	□□□□□ -1.76
YEL043W	YEL043W	SDH2	P21801	266 aa		4.06	□□□□□ -1.76
YEL043W	YEL043W	MAM3	Q12296	706 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms