RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W YEL023CP39992 682 aa4.98□□□□□ -1.61
LCD1YDR499W DAN4P47179 1161 aa4.98□□□□□ -1.61
LCD1YDR499W GRE2Q12068 342 aaKnown RBP4.98□□□□□ -1.61
LCD1YDR499W JIP4Q03361 876 aa4.97□□□□□ -1.61
LCD1YDR499W PTC3P34221 468 aaKnown RBP4.96□□□□□ -1.62
LCD1YDR499W COQ8P27697 501 aa4.96□□□□□ -1.62
LCD1YDR499W SAP30P38429 201 aa4.96□□□□□ -1.62
LCD1YDR499W ATH1P48016 1211 aa4.95□□□□□ -1.62
LCD1YDR499W PTC4P38089 393 aa4.95□□□□□ -1.62
LCD1YDR499W YDL129WQ07555 291 aa4.93□□□□□ -1.62
LCD1YDR499W GUT1P32190 709 aa4.92□□□□□ -1.62
LCD1YDR499W PML39Q03760 334 aa4.89□□□□□ -1.63
LCD1YDR499W SOL3P38858 249 aa4.87□□□□□ -1.63
LCD1YDR499W NST1P53935 1240 aa4.85□□□□□ -1.63
LCD1YDR499W YDR344CQ05510 147 aa4.85□□□□□ -1.63
LCD1YDR499W CHL1P22516 861 aaPredicted RBP4.84□□□□□ -1.63
LCD1YDR499W PRE3P38624 215 aa4.84□□□□□ -1.63
LCD1YDR499W MID1P41821 548 aa4.84□□□□□ -1.63
LCD1YDR499W ILV3P39522 585 aaKnown RBP4.82□□□□□ -1.64
LCD1YDR499W MPH3P0CE00 602 aa4.81□□□□□ -1.64
LCD1YDR499W ELP4Q02884 456 aaKnown RBP4.81□□□□□ -1.64
LCD1YDR499W NOP53Q12080 455 aaKnown RBP4.81□□□□□ -1.64
LCD1YDR499W AI4P03878 556 aa4.81□□□□□ -1.64
LCD1YDR499W YGR273CP53329 174 aa4.81□□□□□ -1.64
LCD1YDR499W BCK2P33306 851 aa4.8□□□□□ -1.64
LCD1YDR499W PEX29Q03370 554 aa4.8□□□□□ -1.64
LCD1YDR499W SET1P38827 1080 aaKnown RBP4.79□□□□□ -1.64
LCD1YDR499W ARH1P48360 493 aa4.76□□□□□ -1.65
LCD1YDR499W VRP1P37370 817 aa4.75□□□□□ -1.65
LCD1YDR499W SLI15P38283 698 aa4.73□□□□□ -1.65
LCD1YDR499W MPC54Q08550 464 aa4.73□□□□□ -1.65
LCD1YDR499W KEX1P09620 729 aa4.72□□□□□ -1.65
LCD1YDR499W HAP5Q02516 242 aa4.72□□□□□ -1.65
LCD1YDR499W SPT23P35210 1082 aa4.71□□□□□ -1.66
LCD1YDR499W VHR2P40041 505 aa4.71□□□□□ -1.66
LCD1YDR499W NMA111P53920 997 aa4.69□□□□□ -1.66
LCD1YDR499W DPL1Q05567 589 aa4.69□□□□□ -1.66
LCD1YDR499W YLR326WQ06170 240 aaKnown RBP4.69□□□□□ -1.66
LCD1YDR499W UBP14P38237 781 aaKnown RBP4.68□□□□□ -1.66
LCD1YDR499W XDJ1P39102 459 aa4.68□□□□□ -1.66
LCD1YDR499W BNI4P53858 892 aa4.68□□□□□ -1.66
LCD1YDR499W PTC2P39966 464 aaKnown RBP4.67□□□□□ -1.66
LCD1YDR499W CDC73Q06697 393 aa4.67□□□□□ -1.66
LCD1YDR499W RAD54P32863 898 aa4.65□□□□□ -1.66
LCD1YDR499W PCS60P38137 543 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66 RIP-Chip
LCD1YDR499W IFH1P39520 1085 aa4.63□□□□□ -1.67
LCD1YDR499W YML082WQ04533 649 aaKnown RBP4.63□□□□□ -1.67
LCD1YDR499W ISU2Q12056 156 aa4.63□□□□□ -1.67
LCD1YDR499W DPS1P04802 557 aaKnown RBP4.61□□□□□ -1.67
LCD1YDR499W KIC1P38692 1080 aa4.61□□□□□ -1.67
LCD1YDR499W VPS70P47161 811 aa4.61□□□□□ -1.67
LCD1YDR499W YDR090CQ03193 310 aa4.61□□□□□ -1.67
LCD1YDR499W YPR015CQ12531 247 aa4.61□□□□□ -1.67
LCD1YDR499W YPR148CQ06523 435 aa4.6□□□□□ -1.67
LCD1YDR499W PDR1P12383 1068 aa4.6□□□□□ -1.67
LCD1YDR499W REF2P42073 533 aaPredicted RBP4.59□□□□□ -1.67
LCD1YDR499W RPP1BP10622 106 aaKnown RBP4.58□□□□□ -1.68
LCD1YDR499W RAM1P22007 431 aa4.58□□□□□ -1.68
LCD1YDR499W PEX21P50091 288 aa4.55□□□□□ -1.68
LCD1YDR499W GYP1Q08484 637 aa4.55□□□□□ -1.68
LCD1YDR499W YRR1Q12172 810 aa4.54□□□□□ -1.68
LCD1YDR499W TUM1Q08686 304 aaKnown RBP4.52□□□□□ -1.69
LCD1YDR499W RAS1P01119 309 aa4.51□□□□□ -1.69
LCD1YDR499W DMA1P38823 416 aa4.51□□□□□ -1.69
LCD1YDR499W COX6P00427 148 aa4.5□□□□□ -1.69
LCD1YDR499W GAP1P19145 602 aaPredicted RBP4.5□□□□□ -1.69
LCD1YDR499W ORC6P38826 435 aa4.5□□□□□ -1.69
LCD1YDR499W CSC1Q06538 782 aa4.5□□□□□ -1.69
LCD1YDR499W TFB4Q12004 338 aa4.49□□□□□ -1.69
LCD1YDR499W MAK21Q12176 1025 aaKnown RBP4.49□□□□□ -1.69
LCD1YDR499W STR2P47164 639 aa4.48□□□□□ -1.69
LCD1YDR499W SRC1Q03707 834 aa4.48□□□□□ -1.69
LCD1YDR499W BUD20Q08004 166 aaPredicted RBP4.48□□□□□ -1.69
LCD1YDR499W NUD1P32336 851 aa4.48□□□□□ -1.69
LCD1YDR499W ISM1P48526 1002 aa4.48□□□□□ -1.69
LCD1YDR499W SDH2P21801 266 aa4.47□□□□□ -1.69
LCD1YDR499W SAS4Q04003 481 aa4.47□□□□□ -1.69
LCD1YDR499W PBS2P08018 668 aa4.46□□□□□ -1.69
LCD1YDR499W AMS1P22855 1083 aa4.46□□□□□ -1.7
LCD1YDR499W MVP1P40959 511 aaKnown RBP4.46□□□□□ -1.7
LCD1YDR499W PRT1P06103 763 aaKnown RBP4.45□□□□□ -1.7
LCD1YDR499W NPL4P33755 580 aa4.45□□□□□ -1.7
LCD1YDR499W CKB1P43639 278 aa4.45□□□□□ -1.7
LCD1YDR499W YPR109WQ06104 294 aa4.45□□□□□ -1.7
LCD1YDR499W RGR1P19263 1082 aa4.44□□□□□ -1.7
LCD1YDR499W GCD11P32481 527 aaKnown RBP4.44□□□□□ -1.7
LCD1YDR499W YEL077CQ3E7X8 1277 aa4.42□□□□□ -1.7
LCD1YDR499W TY1A-DR4O74302 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-HP0C2I4 478 aaKnown RBP4.41□□□□□ -1.7
LCD1YDR499W TY1A-AP0CX57 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-PR1P0CX58 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-ORP0CX59 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-PR2P0CX60 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-DR5P0CX65 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-ER2P0CX66 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-GR3P0CX67 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-LR1P0CX68 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-MR2P0CX69 440 aa4.41□□□□□ -1.7
LCD1YDR499W MRF1P30775 413 aaPredicted RBP4.41□□□□□ -1.7
LCD1YDR499W TY1A-JR2P47099 440 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms