RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W DAN4P47179 1161 aa8.78□□□□□ -1
RSM28YDR494W GRE2Q12068 342 aaKnown RBP8.77□□□□□ -1.01
RSM28YDR494W COQ8P27697 501 aa8.76□□□□□ -1.01
RSM28YDR494W PTC3P34221 468 aaKnown RBP8.76□□□□□ -1.01
RSM28YDR494W YEL023CP39992 682 aa8.74□□□□□ -1.01
RSM28YDR494W PTC4P38089 393 aa8.73□□□□□ -1.01
RSM28YDR494W TFG1P41895 735 aaPredicted RBP8.72□□□□□ -1.01
RSM28YDR494W GUT1P32190 709 aa8.71□□□□□ -1.02
RSM28YDR494W ATH1P48016 1211 aa8.71□□□□□ -1.02
RSM28YDR494W YDL129WQ07555 291 aa8.66□□□□□ -1.02
RSM28YDR494W NOP53Q12080 455 aaKnown RBP8.65□□□□□ -1.02
RSM28YDR494W SAP30P38429 201 aa8.64□□□□□ -1.03
RSM28YDR494W SOL3P38858 249 aa8.61□□□□□ -1.03
RSM28YDR494W NST1P53935 1240 aa8.61□□□□□ -1.03
RSM28YDR494W PML39Q03760 334 aa8.56□□□□□ -1.04
RSM28YDR494W AI4P03878 556 aa8.52□□□□□ -1.05
RSM28YDR494W MPH3P0CE00 602 aa8.52□□□□□ -1.05
RSM28YDR494W CHL1P22516 861 aaPredicted RBP8.51□□□□□ -1.05
RSM28YDR494W SET1P38827 1080 aaKnown RBP8.51□□□□□ -1.05
RSM28YDR494W YGR273CP53329 174 aa8.51□□□□□ -1.05
RSM28YDR494W PRE3P38624 215 aa8.5□□□□□ -1.05
RSM28YDR494W ILV3P39522 585 aaKnown RBP8.49□□□□□ -1.05
RSM28YDR494W MID1P41821 548 aa8.48□□□□□ -1.05
RSM28YDR494W YDR344CQ05510 147 aa8.47□□□□□ -1.05
RSM28YDR494W ARH1P48360 493 aa8.41□□□□□ -1.06
RSM28YDR494W ELP4Q02884 456 aaKnown RBP8.41□□□□□ -1.06
RSM28YDR494W BCK2P33306 851 aa8.4□□□□□ -1.06
RSM28YDR494W PEX29Q03370 554 aa8.39□□□□□ -1.07
RSM28YDR494W KEX1P09620 729 aa8.36□□□□□ -1.07
RSM28YDR494W SLI15P38283 698 aa8.35□□□□□ -1.07
RSM28YDR494W MPC54Q08550 464 aa8.34□□□□□ -1.07
RSM28YDR494W UBP14P38237 781 aaKnown RBP8.32□□□□□ -1.08
RSM28YDR494W IFH1P39520 1085 aa8.32□□□□□ -1.08
RSM28YDR494W YLR326WQ06170 240 aaKnown RBP8.32□□□□□ -1.08
RSM28YDR494W SPT23P35210 1082 aa8.31□□□□□ -1.08
RSM28YDR494W HAP5Q02516 242 aa8.31□□□□□ -1.08
RSM28YDR494W VRP1P37370 817 aa8.3□□□□□ -1.08
RSM28YDR494W VHR2P40041 505 aa8.29□□□□□ -1.08
RSM28YDR494W NMA111P53920 997 aa8.27□□□□□ -1.09
RSM28YDR494W DPL1Q05567 589 aa8.27□□□□□ -1.09
RSM28YDR494W YPR148CQ06523 435 aa8.27□□□□□ -1.09
RSM28YDR494W BNI4P53858 892 aa8.26□□□□□ -1.09
RSM28YDR494W PCS60P38137 543 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
RSM28YDR494W XDJ1P39102 459 aa8.24□□□□□ -1.09
RSM28YDR494W RAD54P32863 898 aa8.23□□□□□ -1.09
RSM28YDR494W CDC73Q06697 393 aa8.22□□□□□ -1.09
RSM28YDR494W PTC2P39966 464 aaKnown RBP8.21□□□□□ -1.1
RSM28YDR494W YML082WQ04533 649 aaKnown RBP8.21□□□□□ -1.1
RSM28YDR494W YDR090CQ03193 310 aa8.2□□□□□ -1.1
RSM28YDR494W ISU2Q12056 156 aa8.19□□□□□ -1.1
RSM28YDR494W REF2P42073 533 aaPredicted RBP8.18□□□□□ -1.1
RSM28YDR494W VPS70P47161 811 aa8.17□□□□□ -1.1
RSM28YDR494W KIC1P38692 1080 aa8.14□□□□□ -1.11
RSM28YDR494W RPP1BP10622 106 aaKnown RBP8.12□□□□□ -1.11
RSM28YDR494W RAM1P22007 431 aa8.1□□□□□ -1.11
RSM28YDR494W YPR015CQ12531 247 aa8.1□□□□□ -1.11
RSM28YDR494W DMA1P38823 416 aa8.08□□□□□ -1.12
RSM28YDR494W MAK21Q12176 1025 aaKnown RBP8.07□□□□□ -1.12
RSM28YDR494W COX6P00427 148 aa8.06□□□□□ -1.12
RSM28YDR494W PDR1P12383 1068 aa8.06□□□□□ -1.12
RSM28YDR494W GAP1P19145 602 aaPredicted RBP8.05□□□□□ -1.12
RSM28YDR494W DPS1P04802 557 aaKnown RBP8.04□□□□□ -1.12
RSM28YDR494W CSC1Q06538 782 aa8.03□□□□□ -1.12
RSM28YDR494W ORC6P38826 435 aa8.01□□□□□ -1.13
RSM28YDR494W CKB1P43639 278 aa8.01□□□□□ -1.13
RSM28YDR494W PEX21P50091 288 aa8.01□□□□□ -1.13
RSM28YDR494W TFB4Q12004 338 aa8.01□□□□□ -1.13
RSM28YDR494W YRR1Q12172 810 aa7.99□□□□□ -1.13
RSM28YDR494W SAS10Q12136 610 aaPredicted RBP7.98□□□□□ -1.13
RSM28YDR494W GYP1Q08484 637 aa7.97□□□□□ -1.13
RSM28YDR494W PBS2P08018 668 aa7.96□□□□□ -1.14
RSM28YDR494W TUM1Q08686 304 aaKnown RBP7.96□□□□□ -1.14
RSM28YDR494W MVP1P40959 511 aaKnown RBP7.94□□□□□ -1.14
RSM28YDR494W SAS4Q04003 481 aa7.93□□□□□ -1.14
RSM28YDR494W BUD20Q08004 166 aaPredicted RBP7.92□□□□□ -1.14
RSM28YDR494W RGR1P19263 1082 aa7.91□□□□□ -1.14
RSM28YDR494W NUD1P32336 851 aa7.91□□□□□ -1.14
RSM28YDR494W STR2P47164 639 aa7.91□□□□□ -1.14
RSM28YDR494W ISM1P48526 1002 aa7.9□□□□□ -1.14
RSM28YDR494W RAS1P01119 309 aa7.88□□□□□ -1.15
RSM28YDR494W SDH2P21801 266 aa7.88□□□□□ -1.15
RSM28YDR494W YPR109WQ06104 294 aa7.88□□□□□ -1.15
RSM28YDR494W PRT1P06103 763 aaKnown RBP7.87□□□□□ -1.15
RSM28YDR494W DSF2P38213 736 aa7.86□□□□□ -1.15
RSM28YDR494W SRC1Q03707 834 aa7.85□□□□□ -1.15
RSM28YDR494W MAM3Q12296 706 aa7.85□□□□□ -1.15
RSM28YDR494W AMS1P22855 1083 aa7.84□□□□□ -1.15
RSM28YDR494W NPL4P33755 580 aa7.84□□□□□ -1.15
RSM28YDR494W PSE1P32337 1089 aaKnown RBP7.83□□□□□ -1.16
RSM28YDR494W MRF1P30775 413 aaPredicted RBP7.81□□□□□ -1.16
RSM28YDR494W IES2P40154 320 aa7.81□□□□□ -1.16
RSM28YDR494W TY1A-DR4O74302 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-HP0C2I4 478 aaKnown RBP7.8□□□□□ -1.16
RSM28YDR494W TY1A-AP0CX57 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-PR1P0CX58 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-ORP0CX59 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-PR2P0CX60 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-DR5P0CX65 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-ER2P0CX66 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-GR3P0CX67 440 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms