RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeastyeast

Gene HTB1, Length 396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTB1YDR224C YEL023CP39992 682 aa9.79□□□□□ -0.84
HTB1YDR224C YDL129WQ07555 291 aa9.77□□□□□ -0.85
HTB1YDR224C GRE2Q12068 342 aaKnown RBP9.76□□□□□ -0.85
HTB1YDR224C MAK11P20484 414 aaKnown RBP9.75□□□□□ -0.85
HTB1YDR224C MIF2P35201 549 aa9.75□□□□□ -0.85
HTB1YDR224C RAM2P29703 316 aa9.71□□□□□ -0.86
HTB1YDR224C ATH1P48016 1211 aa9.69□□□□□ -0.86
HTB1YDR224C CHL1P22516 861 aaPredicted RBP9.67□□□□□ -0.86
HTB1YDR224C GUT1P32190 709 aa9.65□□□□□ -0.86
HTB1YDR224C PTC3P34221 468 aaKnown RBP9.65□□□□□ -0.86
HTB1YDR224C PRE3P38624 215 aa9.63□□□□□ -0.87
HTB1YDR224C BCK2P33306 851 aa9.62□□□□□ -0.87
HTB1YDR224C EDS1P38073 919 aa9.62□□□□□ -0.87
HTB1YDR224C COQ8P27697 501 aa9.6□□□□□ -0.87
HTB1YDR224C PML39Q03760 334 aa9.6□□□□□ -0.87
HTB1YDR224C ELP4Q02884 456 aaKnown RBP9.52□□□□□ -0.89
HTB1YDR224C NST1P53935 1240 aa9.46□□□□□ -0.9
HTB1YDR224C NOP53Q12080 455 aaKnown RBP9.46□□□□□ -0.9
HTB1YDR224C SOL3P38858 249 aa9.45□□□□□ -0.9
HTB1YDR224C AI4P03878 556 aa9.44□□□□□ -0.9
HTB1YDR224C MPH3P0CE00 602 aa9.44□□□□□ -0.9
HTB1YDR224C VRP1P37370 817 aa9.44□□□□□ -0.9
HTB1YDR224C MID1P41821 548 aa9.44□□□□□ -0.9
HTB1YDR224C PEX29Q03370 554 aa9.44□□□□□ -0.9
HTB1YDR224C YDR344CQ05510 147 aa9.44□□□□□ -0.9
HTB1YDR224C ARH1P48360 493 aa9.42□□□□□ -0.9
HTB1YDR224C XDJ1P39102 459 aa9.39□□□□□ -0.91
HTB1YDR224C YGR273CP53329 174 aa9.36□□□□□ -0.91
HTB1YDR224C SPT23P35210 1082 aa9.34□□□□□ -0.91
HTB1YDR224C ILV3P39522 585 aaKnown RBP9.33□□□□□ -0.92
HTB1YDR224C HAP5Q02516 242 aa9.32□□□□□ -0.92
HTB1YDR224C MPC54Q08550 464 aa9.26□□□□□ -0.93
HTB1YDR224C BNI4P53858 892 aa9.25□□□□□ -0.93
HTB1YDR224C SLI15P38283 698 aa9.23□□□□□ -0.93
HTB1YDR224C PTC2P39966 464 aaKnown RBP9.23□□□□□ -0.93
HTB1YDR224C SET1P38827 1080 aaKnown RBP9.22□□□□□ -0.93
HTB1YDR224C DPS1P04802 557 aaKnown RBP9.21□□□□□ -0.94
HTB1YDR224C NMA111P53920 997 aa9.21□□□□□ -0.94
HTB1YDR224C DPL1Q05567 589 aa9.2□□□□□ -0.94
HTB1YDR224C YML082WQ04533 649 aaKnown RBP9.19□□□□□ -0.94
HTB1YDR224C KEX1P09620 729 aa9.17□□□□□ -0.94
HTB1YDR224C ISU2Q12056 156 aa9.1□□□□□ -0.95
HTB1YDR224C VHR2P40041 505 aa9.08□□□□□ -0.96
HTB1YDR224C YLR326WQ06170 240 aaKnown RBP9.07□□□□□ -0.96
HTB1YDR224C UBP14P38237 781 aaKnown RBP9.06□□□□□ -0.96
HTB1YDR224C CDC73Q06697 393 aa9.05□□□□□ -0.96
HTB1YDR224C RPP1BP10622 106 aaKnown RBP9.04□□□□□ -0.96
HTB1YDR224C RAD54P32863 898 aa9.03□□□□□ -0.96
HTB1YDR224C IFH1P39520 1085 aa9.02□□□□□ -0.97
HTB1YDR224C PCS60P38137 543 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
HTB1YDR224C YPR015CQ12531 247 aa8.98□□□□□ -0.97
HTB1YDR224C RAM1P22007 431 aa8.97□□□□□ -0.97
HTB1YDR224C GYP1Q08484 637 aa8.97□□□□□ -0.97
HTB1YDR224C KIC1P38692 1080 aa8.96□□□□□ -0.98
HTB1YDR224C PDR1P12383 1068 aa8.92□□□□□ -0.98
HTB1YDR224C PEX21P50091 288 aa8.89□□□□□ -0.99
HTB1YDR224C SRC1Q03707 834 aa8.89□□□□□ -0.99
HTB1YDR224C SAS4Q04003 481 aa8.89□□□□□ -0.99
HTB1YDR224C YDR090CQ03193 310 aa8.88□□□□□ -0.99
HTB1YDR224C RAS1P01119 309 aa8.87□□□□□ -0.99
HTB1YDR224C REF2P42073 533 aaPredicted RBP8.87□□□□□ -0.99
HTB1YDR224C YPR148CQ06523 435 aa8.85□□□□□ -0.99
HTB1YDR224C AMS1P22855 1083 aa8.83□□□□□ -1
HTB1YDR224C YRR1Q12172 810 aa8.82□□□□□ -1
HTB1YDR224C CSC1Q06538 782 aa8.81□□□□□ -1
HTB1YDR224C TFB4Q12004 338 aa8.8□□□□□ -1
HTB1YDR224C MRF1P30775 413 aaPredicted RBP8.79□□□□□ -1
HTB1YDR224C VPS70P47161 811 aa8.79□□□□□ -1
HTB1YDR224C YEL077CQ3E7X8 1277 aa8.78□□□□□ -1
HTB1YDR224C GAP1P19145 602 aaPredicted RBP8.76□□□□□ -1.01
HTB1YDR224C TUM1Q08686 304 aaKnown RBP8.76□□□□□ -1.01
HTB1YDR224C PRT1P06103 763 aaKnown RBP8.75□□□□□ -1.01
HTB1YDR224C BUD20Q08004 166 aaPredicted RBP8.75□□□□□ -1.01
HTB1YDR224C MAK21Q12176 1025 aaKnown RBP8.75□□□□□ -1.01
HTB1YDR224C TRK1P12685 1235 aa8.73□□□□□ -1.01
HTB1YDR224C SDH2P21801 266 aa8.73□□□□□ -1.01
HTB1YDR224C NPL4P33755 580 aa8.73□□□□□ -1.01
HTB1YDR224C COX6P00427 148 aa8.72□□□□□ -1.01
HTB1YDR224C NUD1P32336 851 aa8.72□□□□□ -1.01
HTB1YDR224C ORC6P38826 435 aa8.71□□□□□ -1.02
HTB1YDR224C STR2P47164 639 aa8.71□□□□□ -1.02
HTB1YDR224C ISM1P48526 1002 aa8.7□□□□□ -1.02
HTB1YDR224C ERG12P07277 443 aa8.68□□□□□ -1.02
HTB1YDR224C GCD11P32481 527 aaKnown RBP8.65□□□□□ -1.02
HTB1YDR224C MVP1P40959 511 aaKnown RBP8.65□□□□□ -1.02
HTB1YDR224C SPT16P32558 1035 aaKnown RBP8.61□□□□□ -1.03
HTB1YDR224C YPR109WQ06104 294 aa8.61□□□□□ -1.03
HTB1YDR224C RGR1P19263 1082 aa8.59□□□□□ -1.03
HTB1YDR224C CKB1P43639 278 aa8.58□□□□□ -1.04
HTB1YDR224C SEC2P17065 759 aa8.56□□□□□ -1.04
HTB1YDR224C PAT1P25644 796 aaKnown RBP8.56□□□□□ -1.04
HTB1YDR224C RQC2Q12532 1038 aaKnown RBP8.56□□□□□ -1.04
HTB1YDR224C TY1A-DR4O74302 440 aa8.55□□□□□ -1.04
HTB1YDR224C PBS2P08018 668 aa8.55□□□□□ -1.04
HTB1YDR224C TY1A-HP0C2I4 478 aaKnown RBP8.55□□□□□ -1.04
HTB1YDR224C TY1A-AP0CX57 440 aa8.55□□□□□ -1.04
HTB1YDR224C TY1A-PR1P0CX58 440 aa8.55□□□□□ -1.04
HTB1YDR224C TY1A-ORP0CX59 440 aa8.55□□□□□ -1.04
HTB1YDR224C TY1A-PR2P0CX60 440 aa8.55□□□□□ -1.04
HTB1YDR224C TY1A-DR5P0CX65 440 aa8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms