RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeastyeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWF1YDR126W GRE2Q12068 342 aaKnown RBP7.34□□□□□ -1.23
SWF1YDR126W MIF2P35201 549 aa7.33□□□□□ -1.24
SWF1YDR126W PTC4P38089 393 aa7.33□□□□□ -1.24
SWF1YDR126W YEL023CP39992 682 aa7.31□□□□□ -1.24
SWF1YDR126W PTC3P34221 468 aaKnown RBP7.3□□□□□ -1.24
SWF1YDR126W EDS1P38073 919 aa7.3□□□□□ -1.24
SWF1YDR126W COQ8P27697 501 aa7.29□□□□□ -1.24
SWF1YDR126W GUT1P32190 709 aa7.28□□□□□ -1.24
SWF1YDR126W ATH1P48016 1211 aa7.28□□□□□ -1.24
SWF1YDR126W YDL129WQ07555 291 aa7.28□□□□□ -1.24
SWF1YDR126W SAP30P38429 201 aa7.26□□□□□ -1.25
SWF1YDR126W NOP53Q12080 455 aaKnown RBP7.24□□□□□ -1.25
SWF1YDR126W NST1P53935 1240 aa7.19□□□□□ -1.26
SWF1YDR126W CHL1P22516 861 aaPredicted RBP7.18□□□□□ -1.26
SWF1YDR126W PRE3P38624 215 aa7.17□□□□□ -1.26
SWF1YDR126W SOL3P38858 249 aa7.16□□□□□ -1.26
SWF1YDR126W PML39Q03760 334 aa7.16□□□□□ -1.26
SWF1YDR126W AI4P03878 556 aa7.13□□□□□ -1.27
SWF1YDR126W MPH3P0CE00 602 aa7.13□□□□□ -1.27
SWF1YDR126W BCK2P33306 851 aa7.11□□□□□ -1.27
SWF1YDR126W YGR273CP53329 174 aa7.1□□□□□ -1.27
SWF1YDR126W ILV3P39522 585 aaKnown RBP7.08□□□□□ -1.28
SWF1YDR126W ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
SWF1YDR126W MID1P41821 548 aa7.06□□□□□ -1.28
SWF1YDR126W ARH1P48360 493 aa7.06□□□□□ -1.28
SWF1YDR126W YDR344CQ05510 147 aa7.06□□□□□ -1.28
SWF1YDR126W SET1P38827 1080 aaKnown RBP7.05□□□□□ -1.28
SWF1YDR126W PEX29Q03370 554 aa7.03□□□□□ -1.28
SWF1YDR126W SPT23P35210 1082 aa6.98□□□□□ -1.29
SWF1YDR126W VRP1P37370 817 aa6.98□□□□□ -1.29
SWF1YDR126W HAP5Q02516 242 aa6.98□□□□□ -1.29
SWF1YDR126W SLI15P38283 698 aa6.97□□□□□ -1.29
SWF1YDR126W MPC54Q08550 464 aa6.97□□□□□ -1.29
SWF1YDR126W KEX1P09620 729 aa6.96□□□□□ -1.3
SWF1YDR126W XDJ1P39102 459 aa6.96□□□□□ -1.3
SWF1YDR126W BNI4P53858 892 aa6.95□□□□□ -1.3
SWF1YDR126W IFH1P39520 1085 aa6.93□□□□□ -1.3
SWF1YDR126W DPL1Q05567 589 aa6.92□□□□□ -1.3
SWF1YDR126W UBP14P38237 781 aaKnown RBP6.91□□□□□ -1.3
SWF1YDR126W NMA111P53920 997 aa6.91□□□□□ -1.3
SWF1YDR126W YLR326WQ06170 240 aaKnown RBP6.91□□□□□ -1.3
SWF1YDR126W PTC2P39966 464 aaKnown RBP6.89□□□□□ -1.31
SWF1YDR126W YML082WQ04533 649 aaKnown RBP6.89□□□□□ -1.31
SWF1YDR126W VHR2P40041 505 aa6.87□□□□□ -1.31
SWF1YDR126W YPR148CQ06523 435 aa6.86□□□□□ -1.31
SWF1YDR126W ISU2Q12056 156 aa6.86□□□□□ -1.31
SWF1YDR126W RAD54P32863 898 aa6.85□□□□□ -1.31
SWF1YDR126W PCS60P38137 543 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SWF1YDR126W CDC73Q06697 393 aa6.83□□□□□ -1.32
SWF1YDR126W RPP1BP10622 106 aaKnown RBP6.81□□□□□ -1.32
SWF1YDR126W YDR090CQ03193 310 aa6.8□□□□□ -1.32
SWF1YDR126W DPS1P04802 557 aaKnown RBP6.79□□□□□ -1.32
SWF1YDR126W REF2P42073 533 aaPredicted RBP6.79□□□□□ -1.32
SWF1YDR126W RAM1P22007 431 aa6.78□□□□□ -1.32
SWF1YDR126W KIC1P38692 1080 aa6.77□□□□□ -1.33
SWF1YDR126W YPR015CQ12531 247 aa6.76□□□□□ -1.33
SWF1YDR126W VPS70P47161 811 aa6.74□□□□□ -1.33
SWF1YDR126W PDR1P12383 1068 aa6.72□□□□□ -1.33
SWF1YDR126W GAP1P19145 602 aaPredicted RBP6.72□□□□□ -1.33
SWF1YDR126W MAK21Q12176 1025 aaKnown RBP6.72□□□□□ -1.33
SWF1YDR126W CSC1Q06538 782 aa6.7□□□□□ -1.34
SWF1YDR126W TFB4Q12004 338 aa6.69□□□□□ -1.34
SWF1YDR126W COX6P00427 148 aa6.68□□□□□ -1.34
SWF1YDR126W PEX21P50091 288 aa6.68□□□□□ -1.34
SWF1YDR126W GYP1Q08484 637 aa6.68□□□□□ -1.34
SWF1YDR126W ORC6P38826 435 aa6.67□□□□□ -1.34
SWF1YDR126W SAS4Q04003 481 aa6.67□□□□□ -1.34
SWF1YDR126W YRR1Q12172 810 aa6.66□□□□□ -1.34
SWF1YDR126W CKB1P43639 278 aa6.64□□□□□ -1.35
SWF1YDR126W SRC1Q03707 834 aa6.62□□□□□ -1.35
SWF1YDR126W TUM1Q08686 304 aaKnown RBP6.62□□□□□ -1.35
SWF1YDR126W BUD20Q08004 166 aaPredicted RBP6.61□□□□□ -1.35
SWF1YDR126W RAS1P01119 309 aa6.6□□□□□ -1.35
SWF1YDR126W AMS1P22855 1083 aa6.6□□□□□ -1.35
SWF1YDR126W STR2P47164 639 aa6.6□□□□□ -1.35
SWF1YDR126W SDH2P21801 266 aa6.59□□□□□ -1.35
SWF1YDR126W NUD1P32336 851 aa6.59□□□□□ -1.35
SWF1YDR126W MVP1P40959 511 aaKnown RBP6.59□□□□□ -1.35
SWF1YDR126W PRT1P06103 763 aaKnown RBP6.58□□□□□ -1.36
SWF1YDR126W ISM1P48526 1002 aa6.58□□□□□ -1.36
SWF1YDR126W PBS2P08018 668 aa6.57□□□□□ -1.36
SWF1YDR126W MRF1P30775 413 aaPredicted RBP6.57□□□□□ -1.36
SWF1YDR126W SAS10Q12136 610 aaPredicted RBP6.57□□□□□ -1.36
SWF1YDR126W RGR1P19263 1082 aa6.56□□□□□ -1.36
SWF1YDR126W NPL4P33755 580 aa6.56□□□□□ -1.36
SWF1YDR126W DMA1P38823 416 aa6.56□□□□□ -1.36
SWF1YDR126W YEL077CQ3E7X8 1277 aa6.56□□□□□ -1.36
SWF1YDR126W YPR109WQ06104 294 aa6.54□□□□□ -1.36
SWF1YDR126W PSE1P32337 1089 aaKnown RBP6.52□□□□□ -1.37
SWF1YDR126W TY1A-DR4O74302 440 aa6.5□□□□□ -1.37
SWF1YDR126W ERG12P07277 443 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-HP0C2I4 478 aaKnown RBP6.5□□□□□ -1.37
SWF1YDR126W TY1A-AP0CX57 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-PR1P0CX58 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-ORP0CX59 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-PR2P0CX60 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-DR5P0CX65 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-ER2P0CX66 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-GR3P0CX67 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-LR1P0CX68 440 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms