RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C DAN4P47179 1161 aa4.82□□□□□ -1.64
SSS1YDR086C PTC4P38089 393 aa4.81□□□□□ -1.64
SSS1YDR086C YEL023CP39992 682 aa4.8□□□□□ -1.64
SSS1YDR086C GRE2Q12068 342 aaKnown RBP4.8□□□□□ -1.64
SSS1YDR086C EDS1P38073 919 aa4.79□□□□□ -1.64
SSS1YDR086C YDL129WQ07555 291 aa4.78□□□□□ -1.64
SSS1YDR086C COQ8P27697 501 aa4.77□□□□□ -1.65
SSS1YDR086C GUT1P32190 709 aa4.77□□□□□ -1.65
SSS1YDR086C PTC3P34221 468 aaKnown RBP4.77□□□□□ -1.65
SSS1YDR086C SAP30P38429 201 aa4.77□□□□□ -1.65
SSS1YDR086C ATH1P48016 1211 aa4.77□□□□□ -1.65
SSS1YDR086C NOP53Q12080 455 aaKnown RBP4.76□□□□□ -1.65
SSS1YDR086C CHL1P22516 861 aaPredicted RBP4.74□□□□□ -1.65
SSS1YDR086C PRE3P38624 215 aa4.72□□□□□ -1.65
SSS1YDR086C PML39Q03760 334 aa4.7□□□□□ -1.66
SSS1YDR086C NST1P53935 1240 aa4.69□□□□□ -1.66
SSS1YDR086C BCK2P33306 851 aa4.68□□□□□ -1.66
SSS1YDR086C SOL3P38858 249 aa4.68□□□□□ -1.66
SSS1YDR086C AI4P03878 556 aa4.67□□□□□ -1.66
SSS1YDR086C YDR344CQ05510 147 aa4.67□□□□□ -1.66
SSS1YDR086C MPH3P0CE00 602 aa4.66□□□□□ -1.66
SSS1YDR086C MID1P41821 548 aa4.65□□□□□ -1.67
SSS1YDR086C ILV3P39522 585 aaKnown RBP4.64□□□□□ -1.67
SSS1YDR086C ARH1P48360 493 aa4.64□□□□□ -1.67
SSS1YDR086C YGR273CP53329 174 aa4.63□□□□□ -1.67
SSS1YDR086C ELP4Q02884 456 aaKnown RBP4.63□□□□□ -1.67
SSS1YDR086C SET1P38827 1080 aaKnown RBP4.62□□□□□ -1.67
SSS1YDR086C PEX29Q03370 554 aa4.62□□□□□ -1.67
SSS1YDR086C SPT23P35210 1082 aa4.6□□□□□ -1.67
SSS1YDR086C XDJ1P39102 459 aa4.6□□□□□ -1.67
SSS1YDR086C VRP1P37370 817 aa4.58□□□□□ -1.68
SSS1YDR086C HAP5Q02516 242 aa4.57□□□□□ -1.68
SSS1YDR086C SLI15P38283 698 aa4.56□□□□□ -1.68
SSS1YDR086C BNI4P53858 892 aa4.56□□□□□ -1.68
SSS1YDR086C MPC54Q08550 464 aa4.56□□□□□ -1.68
SSS1YDR086C KEX1P09620 729 aa4.55□□□□□ -1.68
SSS1YDR086C IFH1P39520 1085 aa4.55□□□□□ -1.68
SSS1YDR086C YML082WQ04533 649 aaKnown RBP4.54□□□□□ -1.68
SSS1YDR086C PTC2P39966 464 aaKnown RBP4.52□□□□□ -1.69
SSS1YDR086C VHR2P40041 505 aa4.52□□□□□ -1.69
SSS1YDR086C NMA111P53920 997 aa4.52□□□□□ -1.69
SSS1YDR086C DPL1Q05567 589 aa4.52□□□□□ -1.69
SSS1YDR086C YLR326WQ06170 240 aaKnown RBP4.52□□□□□ -1.69
SSS1YDR086C RPP1BP10622 106 aaKnown RBP4.51□□□□□ -1.69
SSS1YDR086C UBP14P38237 781 aaKnown RBP4.5□□□□□ -1.69
SSS1YDR086C ISU2Q12056 156 aa4.5□□□□□ -1.69
SSS1YDR086C CDC73Q06697 393 aa4.49□□□□□ -1.69
SSS1YDR086C RAD54P32863 898 aa4.48□□□□□ -1.69
SSS1YDR086C PCS60P38137 543 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SSS1YDR086C DPS1P04802 557 aaKnown RBP4.47□□□□□ -1.69
SSS1YDR086C YPR148CQ06523 435 aa4.45□□□□□ -1.7
SSS1YDR086C YDR090CQ03193 310 aa4.44□□□□□ -1.7
SSS1YDR086C YPR015CQ12531 247 aa4.44□□□□□ -1.7
SSS1YDR086C KIC1P38692 1080 aa4.43□□□□□ -1.7
SSS1YDR086C PDR1P12383 1068 aa4.42□□□□□ -1.7
SSS1YDR086C RAM1P22007 431 aa4.42□□□□□ -1.7
SSS1YDR086C REF2P42073 533 aaPredicted RBP4.42□□□□□ -1.7
SSS1YDR086C VPS70P47161 811 aa4.42□□□□□ -1.7
SSS1YDR086C SAS4Q04003 481 aa4.41□□□□□ -1.7
SSS1YDR086C MAK21Q12176 1025 aaKnown RBP4.41□□□□□ -1.7
SSS1YDR086C CSC1Q06538 782 aa4.39□□□□□ -1.71
SSS1YDR086C GYP1Q08484 637 aa4.39□□□□□ -1.71
SSS1YDR086C TFB4Q12004 338 aa4.39□□□□□ -1.71
SSS1YDR086C PEX21P50091 288 aa4.38□□□□□ -1.71
SSS1YDR086C GAP1P19145 602 aaPredicted RBP4.37□□□□□ -1.71
SSS1YDR086C YRR1Q12172 810 aa4.37□□□□□ -1.71
SSS1YDR086C COX6P00427 148 aa4.36□□□□□ -1.71
SSS1YDR086C ORC6P38826 435 aa4.36□□□□□ -1.71
SSS1YDR086C AMS1P22855 1083 aa4.35□□□□□ -1.71
SSS1YDR086C MRF1P30775 413 aaPredicted RBP4.35□□□□□ -1.71
SSS1YDR086C RAS1P01119 309 aa4.34□□□□□ -1.71
SSS1YDR086C CKB1P43639 278 aa4.34□□□□□ -1.71
SSS1YDR086C TUM1Q08686 304 aaKnown RBP4.34□□□□□ -1.71
SSS1YDR086C SRC1Q03707 834 aa4.33□□□□□ -1.72
SSS1YDR086C NUD1P32336 851 aa4.32□□□□□ -1.72
SSS1YDR086C DMA1P38823 416 aa4.32□□□□□ -1.72
SSS1YDR086C STR2P47164 639 aa4.32□□□□□ -1.72
SSS1YDR086C YEL077CQ3E7X8 1277 aa4.32□□□□□ -1.72
SSS1YDR086C PRT1P06103 763 aaKnown RBP4.31□□□□□ -1.72
SSS1YDR086C SDH2P21801 266 aa4.31□□□□□ -1.72
SSS1YDR086C ISM1P48526 1002 aa4.31□□□□□ -1.72
SSS1YDR086C BUD20Q08004 166 aaPredicted RBP4.31□□□□□ -1.72
SSS1YDR086C NPL4P33755 580 aa4.3□□□□□ -1.72
SSS1YDR086C MVP1P40959 511 aaKnown RBP4.3□□□□□ -1.72
SSS1YDR086C PBS2P08018 668 aa4.29□□□□□ -1.72
SSS1YDR086C TRK1P12685 1235 aa4.28□□□□□ -1.72
SSS1YDR086C ERG12P07277 443 aa4.27□□□□□ -1.73
SSS1YDR086C RGR1P19263 1082 aa4.27□□□□□ -1.73
SSS1YDR086C YPR109WQ06104 294 aa4.27□□□□□ -1.73
SSS1YDR086C TY1A-DR4O74302 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-HP0C2I4 478 aaKnown RBP4.26□□□□□ -1.73
SSS1YDR086C TY1A-AP0CX57 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-PR1P0CX58 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-ORP0CX59 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-PR2P0CX60 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-DR5P0CX65 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-ER2P0CX66 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-GR3P0CX67 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-LR1P0CX68 440 aa4.26□□□□□ -1.73
SSS1YDR086C TY1A-MR2P0CX69 440 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms