RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C PTC4P38089 393 aa8.14□□□□□ -1.11
UBX3YDL091C YEL023CP39992 682 aa8.12□□□□□ -1.11
UBX3YDL091C CHL1P22516 861 aaPredicted RBP8.09□□□□□ -1.12
UBX3YDL091C BCK2P33306 851 aa8.05□□□□□ -1.12
UBX3YDL091C PRE3P38624 215 aa8.05□□□□□ -1.12
UBX3YDL091C GRE2Q12068 342 aaKnown RBP8.04□□□□□ -1.12
UBX3YDL091C MAK11P20484 414 aaKnown RBP8.01□□□□□ -1.13
UBX3YDL091C RAM2P29703 316 aa8.01□□□□□ -1.13
UBX3YDL091C MIF2P35201 549 aa8□□□□□ -1.13
UBX3YDL091C EDS1P38073 919 aa7.99□□□□□ -1.13
UBX3YDL091C PTC3P34221 468 aaKnown RBP7.97□□□□□ -1.13
UBX3YDL091C PML39Q03760 334 aa7.97□□□□□ -1.13
UBX3YDL091C YDR344CQ05510 147 aa7.97□□□□□ -1.13
UBX3YDL091C GUT1P32190 709 aa7.97□□□□□ -1.13
UBX3YDL091C ATH1P48016 1211 aa7.97□□□□□ -1.13
UBX3YDL091C NST1P53935 1240 aa7.92□□□□□ -1.14
UBX3YDL091C COQ8P27697 501 aa7.91□□□□□ -1.14
UBX3YDL091C ELP4Q02884 456 aaKnown RBP7.9□□□□□ -1.14
UBX3YDL091C VRP1P37370 817 aa7.89□□□□□ -1.15
UBX3YDL091C SOL3P38858 249 aa7.89□□□□□ -1.15
UBX3YDL091C XDJ1P39102 459 aa7.87□□□□□ -1.15
UBX3YDL091C MID1P41821 548 aa7.87□□□□□ -1.15
UBX3YDL091C ARH1P48360 493 aa7.85□□□□□ -1.15
UBX3YDL091C MPH3P0CE00 602 aa7.83□□□□□ -1.16
UBX3YDL091C AI4P03878 556 aa7.82□□□□□ -1.16
UBX3YDL091C ILV3P39522 585 aaKnown RBP7.79□□□□□ -1.16
UBX3YDL091C PEX29Q03370 554 aa7.77□□□□□ -1.17
UBX3YDL091C SPT23P35210 1082 aa7.76□□□□□ -1.17
UBX3YDL091C NOP53Q12080 455 aaKnown RBP7.76□□□□□ -1.17
UBX3YDL091C YGR273CP53329 174 aa7.73□□□□□ -1.17
UBX3YDL091C HAP5Q02516 242 aa7.72□□□□□ -1.17
UBX3YDL091C DPS1P04802 557 aaKnown RBP7.7□□□□□ -1.18
UBX3YDL091C MPC54Q08550 464 aa7.69□□□□□ -1.18
UBX3YDL091C BNI4P53858 892 aa7.68□□□□□ -1.18
UBX3YDL091C RGA2Q06407 1009 aa7.67□□□□□ -1.18
UBX3YDL091C YML082WQ04533 649 aaKnown RBP7.66□□□□□ -1.18
UBX3YDL091C SLI15P38283 698 aa7.65□□□□□ -1.18
UBX3YDL091C PTC2P39966 464 aaKnown RBP7.64□□□□□ -1.19
UBX3YDL091C NMA111P53920 997 aa7.63□□□□□ -1.19
UBX3YDL091C SET1P38827 1080 aaKnown RBP7.61□□□□□ -1.19
UBX3YDL091C DMA1P38823 416 aa7.59□□□□□ -1.19
UBX3YDL091C DPL1Q05567 589 aa7.59□□□□□ -1.19
UBX3YDL091C KEX1P09620 729 aa7.56□□□□□ -1.2
UBX3YDL091C SRC1Q03707 834 aa7.54□□□□□ -1.2
UBX3YDL091C RQC2Q12532 1038 aaKnown RBP7.53□□□□□ -1.2
UBX3YDL091C ISU2Q12056 156 aa7.52□□□□□ -1.21
UBX3YDL091C YPR015CQ12531 247 aa7.52□□□□□ -1.21
UBX3YDL091C RAM1P22007 431 aa7.51□□□□□ -1.21
UBX3YDL091C IFH1P39520 1085 aa7.49□□□□□ -1.21
UBX3YDL091C CDC73Q06697 393 aa7.49□□□□□ -1.21
UBX3YDL091C UBP14P38237 781 aaKnown RBP7.48□□□□□ -1.21
UBX3YDL091C YLR326WQ06170 240 aaKnown RBP7.48□□□□□ -1.21
UBX3YDL091C YPR148CQ06523 435 aa7.47□□□□□ -1.21
UBX3YDL091C RAS1P01119 309 aa7.46□□□□□ -1.22
UBX3YDL091C VHR2P40041 505 aa7.45□□□□□ -1.22
UBX3YDL091C PCS60P38137 543 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
UBX3YDL091C SAS10Q12136 610 aaPredicted RBP7.42□□□□□ -1.22
UBX3YDL091C PDR1P12383 1068 aa7.41□□□□□ -1.22
UBX3YDL091C GYP1Q08484 637 aa7.4□□□□□ -1.22
UBX3YDL091C RAD54P32863 898 aa7.39□□□□□ -1.23
UBX3YDL091C VPS70P47161 811 aa7.36□□□□□ -1.23
UBX3YDL091C AMS1P22855 1083 aa7.35□□□□□ -1.23
UBX3YDL091C RGA1P39083 1007 aa7.35□□□□□ -1.23
UBX3YDL091C SDH2P21801 266 aa7.34□□□□□ -1.23
UBX3YDL091C SAS4Q04003 481 aa7.34□□□□□ -1.23
UBX3YDL091C RPP1BP10622 106 aaKnown RBP7.33□□□□□ -1.24
UBX3YDL091C YDR090CQ03193 310 aa7.33□□□□□ -1.24
UBX3YDL091C REF2P42073 533 aaPredicted RBP7.31□□□□□ -1.24
UBX3YDL091C CKB1P43639 278 aa7.31□□□□□ -1.24
UBX3YDL091C TRK1P12685 1235 aa7.27□□□□□ -1.25
UBX3YDL091C BUD20Q08004 166 aaPredicted RBP7.27□□□□□ -1.25
UBX3YDL091C GAP1P19145 602 aaPredicted RBP7.26□□□□□ -1.25
UBX3YDL091C KIC1P38692 1080 aa7.26□□□□□ -1.25
UBX3YDL091C YRR1Q12172 810 aa7.26□□□□□ -1.25
UBX3YDL091C PEX21P50091 288 aa7.24□□□□□ -1.25
UBX3YDL091C MAK21Q12176 1025 aaKnown RBP7.24□□□□□ -1.25
UBX3YDL091C YEL077CQ3E7X8 1277 aa7.23□□□□□ -1.25
UBX3YDL091C PRT1P06103 763 aaKnown RBP7.22□□□□□ -1.25
UBX3YDL091C MRF1P30775 413 aaPredicted RBP7.22□□□□□ -1.25
UBX3YDL091C STR2P47164 639 aa7.22□□□□□ -1.25
UBX3YDL091C COX6P00427 148 aa7.21□□□□□ -1.25
UBX3YDL091C CSC1Q06538 782 aa7.21□□□□□ -1.25
UBX3YDL091C TFB4Q12004 338 aa7.21□□□□□ -1.25
UBX3YDL091C ISM1P48526 1002 aa7.2□□□□□ -1.26
UBX3YDL091C PBS2P08018 668 aa7.2□□□□□ -1.26
UBX3YDL091C TUM1Q08686 304 aaKnown RBP7.2□□□□□ -1.26
UBX3YDL091C NUD1P32336 851 aa7.18□□□□□ -1.26
UBX3YDL091C DSF2P38213 736 aa7.16□□□□□ -1.26
UBX3YDL091C ORC6P38826 435 aa7.15□□□□□ -1.26
UBX3YDL091C ERG12P07277 443 aa7.13□□□□□ -1.27
UBX3YDL091C SEC2P17065 759 aa7.12□□□□□ -1.27
UBX3YDL091C NPL4P33755 580 aa7.12□□□□□ -1.27
UBX3YDL091C SPB4P25808 606 aaPredicted RBP7.11□□□□□ -1.27
UBX3YDL091C TY1A-DR4O74302 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-HP0C2I4 478 aaKnown RBP7.1□□□□□ -1.27
UBX3YDL091C TY1A-AP0CX57 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-PR1P0CX58 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-ORP0CX59 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-PR2P0CX60 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-DR5P0CX65 440 aa7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms