RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeastyeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSA4YCR072C MAK11P20484 414 aaKnown RBP9.09□□□□□ -0.95
RSA4YCR072C RAM2P29703 316 aa9.09□□□□□ -0.95
RSA4YCR072C MIF2P35201 549 aa9.09□□□□□ -0.95
RSA4YCR072C JIP4Q03361 876 aa9.07□□□□□ -0.96
RSA4YCR072C GRE2Q12068 342 aaKnown RBP9.05□□□□□ -0.96
RSA4YCR072C YEL023CP39992 682 aa9.03□□□□□ -0.96
RSA4YCR072C DAN4P47179 1161 aa9.01□□□□□ -0.97
RSA4YCR072C PTC4P38089 393 aa9□□□□□ -0.97
RSA4YCR072C ATH1P48016 1211 aa9□□□□□ -0.97
RSA4YCR072C SAP30P38429 201 aa8.98□□□□□ -0.97
RSA4YCR072C PTC3P34221 468 aaKnown RBP8.97□□□□□ -0.97
RSA4YCR072C EDS1P38073 919 aa8.97□□□□□ -0.97
RSA4YCR072C COQ8P27697 501 aa8.96□□□□□ -0.97
RSA4YCR072C YDL129WQ07555 291 aa8.95□□□□□ -0.98
RSA4YCR072C GUT1P32190 709 aa8.95□□□□□ -0.98
RSA4YCR072C NOP2P40991 618 aaKnown RBP8.91□□□□□ -0.98
RSA4YCR072C PML39Q03760 334 aa8.85□□□□□ -0.99
RSA4YCR072C CHL1P22516 861 aaPredicted RBP8.83□□□□□ -1
RSA4YCR072C PRE3P38624 215 aa8.81□□□□□ -1
RSA4YCR072C NOP53Q12080 455 aaKnown RBP8.8□□□□□ -1
RSA4YCR072C SOL3P38858 249 aa8.75□□□□□ -1.01
RSA4YCR072C NST1P53935 1240 aa8.75□□□□□ -1.01
RSA4YCR072C BCK2P33306 851 aa8.75□□□□□ -1.01
RSA4YCR072C ELP4Q02884 456 aaKnown RBP8.75□□□□□ -1.01
RSA4YCR072C AI4P03878 556 aa8.74□□□□□ -1.01
RSA4YCR072C MPH3P0CE00 602 aa8.73□□□□□ -1.01
RSA4YCR072C PEX29Q03370 554 aa8.73□□□□□ -1.01
RSA4YCR072C MID1P41821 548 aa8.72□□□□□ -1.01
RSA4YCR072C YGR273CP53329 174 aa8.71□□□□□ -1.01
RSA4YCR072C SPA2P23201 1466 aaKnown RBP8.7□□□□□ -1.02
RSA4YCR072C YDR344CQ05510 147 aa8.69□□□□□ -1.02
RSA4YCR072C SET1P38827 1080 aaKnown RBP8.68□□□□□ -1.02
RSA4YCR072C ILV3P39522 585 aaKnown RBP8.67□□□□□ -1.02
RSA4YCR072C ARH1P48360 493 aa8.66□□□□□ -1.02
RSA4YCR072C VRP1P37370 817 aa8.62□□□□□ -1.03
RSA4YCR072C SKI3P17883 1432 aaKnown RBP8.61□□□□□ -1.03
RSA4YCR072C HAP5Q02516 242 aa8.59□□□□□ -1.03
RSA4YCR072C MPC54Q08550 464 aa8.58□□□□□ -1.04
RSA4YCR072C SPT23P35210 1082 aa8.57□□□□□ -1.04
RSA4YCR072C SLI15P38283 698 aa8.56□□□□□ -1.04
RSA4YCR072C CAB3P36076 571 aa8.55□□□□□ -1.04
RSA4YCR072C KEX1P09620 729 aa8.54□□□□□ -1.04
RSA4YCR072C EBP2P36049 427 aaKnown RBP8.54□□□□□ -1.04
RSA4YCR072C XDJ1P39102 459 aa8.54□□□□□ -1.04
RSA4YCR072C LEU3P08638 886 aa8.53□□□□□ -1.04
RSA4YCR072C BNI4P53858 892 aa8.51□□□□□ -1.05
RSA4YCR072C DPL1Q05567 589 aa8.51□□□□□ -1.05
RSA4YCR072C IFH1P39520 1085 aa8.5□□□□□ -1.05
RSA4YCR072C VHR2P40041 505 aa8.5□□□□□ -1.05
RSA4YCR072C NMA111P53920 997 aa8.5□□□□□ -1.05
RSA4YCR072C PTC2P39966 464 aaKnown RBP8.49□□□□□ -1.05
RSA4YCR072C YLR326WQ06170 240 aaKnown RBP8.48□□□□□ -1.05
RSA4YCR072C SSN2P38931 1420 aa8.48□□□□□ -1.05
RSA4YCR072C DMA2P53924 522 aa8.47□□□□□ -1.05
RSA4YCR072C UBP14P38237 781 aaKnown RBP8.45□□□□□ -1.06
RSA4YCR072C SGS1P35187 1447 aa8.45□□□□□ -1.06
RSA4YCR072C RAD54P32863 898 aa8.44□□□□□ -1.06
RSA4YCR072C YML082WQ04533 649 aaKnown RBP8.43□□□□□ -1.06
RSA4YCR072C CDC73Q06697 393 aa8.42□□□□□ -1.06
RSA4YCR072C RPP1BP10622 106 aaKnown RBP8.41□□□□□ -1.06
RSA4YCR072C ISU2Q12056 156 aa8.41□□□□□ -1.06
RSA4YCR072C PCS60P38137 543 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
RSA4YCR072C KIC1P38692 1080 aa8.39□□□□□ -1.07
RSA4YCR072C DPS1P04802 557 aaKnown RBP8.39□□□□□ -1.07
RSA4YCR072C YPR148CQ06523 435 aa8.35□□□□□ -1.07
RSA4YCR072C SAS10Q12136 610 aaPredicted RBP8.34□□□□□ -1.07
RSA4YCR072C REF2P42073 533 aaPredicted RBP8.34□□□□□ -1.08
RSA4YCR072C VPS70P47161 811 aa8.33□□□□□ -1.08
RSA4YCR072C YDR090CQ03193 310 aa8.32□□□□□ -1.08
RSA4YCR072C IOC4Q04213 475 aa8.29□□□□□ -1.08
RSA4YCR072C YPR015CQ12531 247 aa8.29□□□□□ -1.08
RSA4YCR072C PEX21P50091 288 aa8.29□□□□□ -1.08
RSA4YCR072C PDR1P12383 1068 aa8.28□□□□□ -1.08
RSA4YCR072C RAM1P22007 431 aa8.28□□□□□ -1.08
RSA4YCR072C URN1Q06525 465 aaKnown RBP8.28□□□□□ -1.08
RSA4YCR072C GYP1Q08484 637 aa8.28□□□□□ -1.08
RSA4YCR072C NAP1P25293 417 aaKnown RBP8.26□□□□□ -1.09
RSA4YCR072C SIS2P36024 562 aa8.26□□□□□ -1.09
RSA4YCR072C RLF2Q12495 606 aa8.23□□□□□ -1.09
RSA4YCR072C CSC1Q06538 782 aa8.22□□□□□ -1.09
RSA4YCR072C YRR1Q12172 810 aa8.22□□□□□ -1.09
RSA4YCR072C MAK21Q12176 1025 aaKnown RBP8.22□□□□□ -1.09
RSA4YCR072C TFB4Q12004 338 aa8.2□□□□□ -1.1
RSA4YCR072C COX6P00427 148 aa8.19□□□□□ -1.1
RSA4YCR072C SAS4Q04003 481 aa8.18□□□□□ -1.1
RSA4YCR072C TUM1Q08686 304 aaKnown RBP8.18□□□□□ -1.1
RSA4YCR072C AIM44Q99299 758 aa8.18□□□□□ -1.1
RSA4YCR072C RPN1P38764 993 aaKnown RBP8.17□□□□□ -1.1
RSA4YCR072C ORC6P38826 435 aa8.17□□□□□ -1.1
RSA4YCR072C GAP1P19145 602 aaPredicted RBP8.16□□□□□ -1.1
RSA4YCR072C ENP1P38333 483 aaKnown RBP8.15□□□□□ -1.1
RSA4YCR072C CKB1P43639 278 aa8.13□□□□□ -1.11
RSA4YCR072C ORC1P54784 914 aaPredicted RBP8.13□□□□□ -1.11
RSA4YCR072C TCB3Q03640 1545 aaKnown RBP8.13□□□□□ -1.11
RSA4YCR072C RAS1P01119 309 aa8.13□□□□□ -1.11
RSA4YCR072C NPL4P33755 580 aa8.13□□□□□ -1.11
RSA4YCR072C NUD1P32336 851 aa8.12□□□□□ -1.11
RSA4YCR072C PRT1P06103 763 aaKnown RBP8.11□□□□□ -1.11
RSA4YCR072C AMS1P22855 1083 aa8.11□□□□□ -1.11
RSA4YCR072C SRC1Q03707 834 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms