RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	TY1B-LR1	Q12088	1755 aa	Known RBP	14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-NL1	Q12112	1755 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-GR1	Q12141	1755 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-BL	Q12490	1755 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	ESC1	Q03661	1658 aa	Known RBP	14.64	□□□□□ -0.07
YCL074W	YCL074W	TY3B-G	Q99315	1547 aa		14.61	□□□□□ -0.07
YCL074W	YCL074W	GEA2	P39993	1459 aa	Known RBP	14.57	□□□□□ -0.08
YCL074W	YCL074W	NTE1	Q04958	1679 aa		14.56	□□□□□ -0.08
YCL074W	YCL074W	RTT106	P40161	455 aa		14.56	□□□□□ -0.08
YCL074W	YCL074W	RPA190	P10964	1664 aa	Known RBP	14.54	□□□□□ -0.08
YCL074W	YCL074W	YBT1	P32386	1661 aa		14.53	□□□□□ -0.08
YCL074W	YCL074W	RPO21	P04050	1733 aa	Known RBP	14.52	□□□□□ -0.08
YCL074W	YCL074W	IRC20	Q06554	1556 aa		14.51	□□□□□ -0.09
YCL074W	YCL074W	CAT8	P39113	1433 aa		14.51	□□□□□ -0.09
YCL074W	YCL074W	DNF1	P32660	1571 aa		14.5	□□□□□ -0.09
YCL074W	YCL074W	VPS15	P22219	1454 aa		14.5	□□□□□ -0.09
YCL074W	YCL074W	MTC1	P47018	478 aa	Known RBP	14.4	□□□□□ -0.1
YCL074W	YCL074W	NUP159	P40477	1460 aa		14.39	□□□□□ -0.11
YCL074W	YCL074W	SRB8	P25648	1427 aa		14.35	□□□□□ -0.11
YCL074W	YCL074W	PDR12	Q02785	1511 aa		14.31	□□□□□ -0.12
YCL074W	YCL074W	ARO1	P08566	1588 aa	Known RBP	14.31	□□□□□ -0.12
YCL074W	YCL074W	GDB1	Q06625	1536 aa		14.31	□□□□□ -0.12
YCL074W	YCL074W	PDR10	P51533	1564 aa		14.3	□□□□□ -0.12
YCL074W	YCL074W	MET10	P39692	1035 aa		14.29	□□□□□ -0.12
YCL074W	YCL074W	POL5	P39985	1022 aa	Known RBP	14.25	□□□□□ -0.13
YCL074W	YCL074W	CKB1	P43639	278 aa		14.25	□□□□□ -0.13
YCL074W	YCL074W	SPO14	P36126	1683 aa		14.25	□□□□□ -0.13
YCL074W	YCL074W	GCN2	P15442	1659 aa		14.23	□□□□□ -0.13
YCL074W	YCL074W	NUP157	P40064	1391 aa	Known RBP	14.22	□□□□□ -0.13
YCL074W	YCL074W	MET5	P47169	1442 aa		14.21	□□□□□ -0.13
YCL074W	YCL074W	YRF1-1	P0CX20	1796 aa		14.21	□□□□□ -0.13
YCL074W	YCL074W	YRF1-5	P0CX21	1796 aa		14.21	□□□□□ -0.13
YCL074W	YCL074W	YRF1-8	P0CX22	1796 aa		14.21	□□□□□ -0.13
YCL074W	YCL074W	MMS1	Q06211	1407 aa		14.16	□□□□□ -0.14
YCL074W	YCL074W	BUD21	Q08492	214 aa	Predicted RBP	14.15	□□□□□ -0.14
YCL074W	YCL074W	BUD3	P25558	1636 aa		14.12	□□□□□ -0.15
YCL074W	YCL074W	IQG1	Q12280	1495 aa		14.11	□□□□□ -0.15
YCL074W	YCL074W	YSP2	Q06681	1438 aa		14.1	□□□□□ -0.15
YCL074W	YCL074W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	14.09	□□□□□ -0.15	not detected
YCL074W	YCL074W	NOP7	P53261	605 aa	Known RBP	14.07	□□□□□ -0.16
YCL074W	YCL074W	SEC3	P33332	1336 aa	Known RBP	14.01	□□□□□ -0.17
YCL074W	YCL074W	PDR5	P33302	1511 aa	Known RBP	14	□□□□□ -0.17
YCL074W	YCL074W	PAF1	P38351	445 aa		13.98	□□□□□ -0.17
YCL074W	YCL074W	ENP1	P38333	483 aa	Known RBP	13.97	□□□□□ -0.17
YCL074W	YCL074W	BNR1	P40450	1375 aa		13.96	□□□□□ -0.18
YCL074W	YCL074W	YOR093C	Q12275	1648 aa		13.95	□□□□□ -0.18
YCL074W	YCL074W	SEC7	P11075	2009 aa	Known RBP	13.91	□□□□□ -0.18
YCL074W	YCL074W	CHC1	P22137	1653 aa	Known RBP	13.89	□□□□□ -0.19
YCL074W	YCL074W	BFR2	Q06631	534 aa	Known RBP	13.89	□□□□□ -0.19
YCL074W	YCL074W	SPT7	P35177	1332 aa		13.88	□□□□□ -0.19
YCL074W	YCL074W	LTE1	P07866	1435 aa		13.85	□□□□□ -0.19
YCL074W	YCL074W	NOP2	P40991	618 aa	Known RBP	13.84	□□□□□ -0.19
YCL074W	YCL074W	TRM3	Q07527	1436 aa		13.82	□□□□□ -0.2
YCL074W	YCL074W	DOP1	Q03921	1698 aa		13.81	□□□□□ -0.2
YCL074W	YCL074W	MHP1	P43638	1398 aa		13.81	□□□□□ -0.2
YCL074W	YCL074W	RAV1	P47104	1357 aa		13.79	□□□□□ -0.2
YCL074W	YCL074W	TY3B-I	Q7LHG5	1498 aa	Known RBP	13.75	□□□□□ -0.21
YCL074W	YCL074W	RTC1	Q08281	1341 aa		13.75	□□□□□ -0.21
YCL074W	YCL074W	VMR1	P38735	1592 aa		13.73	□□□□□ -0.21
YCL074W	YCL074W	NUP188	P52593	1655 aa	Known RBP	13.72	□□□□□ -0.21
YCL074W	YCL074W	DRS2	P39524	1355 aa		13.72	□□□□□ -0.21
YCL074W	YCL074W	ORC1	P54784	914 aa	Predicted RBP	13.71	□□□□□ -0.21
YCL074W	YCL074W	IML1	P47170	1584 aa		13.71	□□□□□ -0.22
YCL074W	YCL074W	PDR11	P40550	1411 aa		13.7	□□□□□ -0.22
YCL074W	YCL074W	ESL2	P36168	1195 aa		13.65	□□□□□ -0.22
YCL074W	YCL074W	TAF5	P38129	798 aa		13.65	□□□□□ -0.22
YCL074W	YCL074W	SCT1	P32784	759 aa		13.63	□□□□□ -0.23
YCL074W	YCL074W	PSD2	P53037	1138 aa	Known RBP	13.63	□□□□□ -0.23
YCL074W	YCL074W	DNF2	Q12675	1612 aa		13.62	□□□□□ -0.23
YCL074W	YCL074W	LEU3	P08638	886 aa		13.62	□□□□□ -0.23
YCL074W	YCL074W	YLR419W	Q06698	1435 aa	Known RBP	13.6	□□□□□ -0.23
YCL074W	YCL074W	KIP3	P53086	805 aa	Known RBP	13.58	□□□□□ -0.24
YCL074W	YCL074W	PDS5	Q04264	1277 aa		13.58	□□□□□ -0.24
YCL074W	YCL074W	PRS1	P32895	427 aa	Known RBP	13.56	□□□□□ -0.24
YCL074W	YCL074W	NUP192	P47054	1683 aa		13.56	□□□□□ -0.24
YCL074W	YCL074W	URN1	Q06525	465 aa	Known RBP	13.55	□□□□□ -0.24
YCL074W	YCL074W	IPL1	P38991	367 aa		13.49	□□□□□ -0.25
YCL074W	YCL074W	ITT1	Q04638	464 aa		13.47	□□□□□ -0.25
YCL074W	YCL074W	SPE2	P21182	396 aa		13.46	□□□□□ -0.25
YCL074W	YCL074W	BNI1	P41832	1953 aa		13.45	□□□□□ -0.26
YCL074W	YCL074W	TYS1	P36421	394 aa	Known RBP	13.45	□□□□□ -0.26
YCL074W	YCL074W	ALD4	P46367	519 aa	Known RBP	13.39	□□□□□ -0.27
YCL074W	YCL074W	BCK1	Q01389	1478 aa		13.39	□□□□□ -0.27
YCL074W	YCL074W	TAF8	Q03750	510 aa		13.37	□□□□□ -0.27
YCL074W	YCL074W	NAP1	P25293	417 aa	Known RBP	13.36	□□□□□ -0.27
YCL074W	YCL074W	YAP3	P38749	330 aa		13.36	□□□□□ -0.27
YCL074W	YCL074W	NST1	P53935	1240 aa		13.36	□□□□□ -0.27
YCL074W	YCL074W	MLP1	Q02455	1875 aa	Known RBP	13.36	□□□□□ -0.27
YCL074W	YCL074W	RAD9	P14737	1309 aa		13.35	□□□□□ -0.27
YCL074W	YCL074W	HAP1	P0CE41	1502 aa		13.34	□□□□□ -0.27
YCL074W	YCL074W	CHZ1	P40019	153 aa	Predicted RBP	13.31	□□□□□ -0.28
YCL074W	YCL074W	RTG3	P38165	486 aa		13.3	□□□□□ -0.28
YCL074W	YCL074W	FKH1	P40466	484 aa		13.28	□□□□□ -0.28
YCL074W	YCL074W	RPP0	P05317	312 aa	Known RBP	13.27	□□□□□ -0.29
YCL074W	YCL074W	CAB1	Q04430	367 aa		13.27	□□□□□ -0.29
YCL074W	YCL074W	IOC4	Q04213	475 aa		13.24	□□□□□ -0.29
YCL074W	YCL074W	VPS27	P40343	622 aa	Known RBP	13.23	□□□□□ -0.29
YCL074W	YCL074W	CDC45	Q08032	650 aa		13.23	□□□□□ -0.29
YCL074W	YCL074W	TFA1	P36100	482 aa		13.21	□□□□□ -0.29
YCL074W	YCL074W	MRX12	P47084	519 aa		13.2	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms