RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeastyeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDH1YBR204C GRE2Q12068 342 aaKnown RBP9.58□□□□□ -0.88
LDH1YBR204C YEL023CP39992 682 aa9.56□□□□□ -0.88
LDH1YBR204C DAN4P47179 1161 aa9.56□□□□□ -0.88
LDH1YBR204C PTC4P38089 393 aa9.54□□□□□ -0.88
LDH1YBR204C ATH1P48016 1211 aa9.52□□□□□ -0.89
LDH1YBR204C PTC3P34221 468 aaKnown RBP9.51□□□□□ -0.89
LDH1YBR204C EDS1P38073 919 aa9.5□□□□□ -0.89
LDH1YBR204C SAP30P38429 201 aa9.5□□□□□ -0.89
LDH1YBR204C COQ8P27697 501 aa9.49□□□□□ -0.89
LDH1YBR204C YDL129WQ07555 291 aa9.49□□□□□ -0.89
LDH1YBR204C GUT1P32190 709 aa9.47□□□□□ -0.89
LDH1YBR204C PML39Q03760 334 aa9.36□□□□□ -0.91
LDH1YBR204C NOP53Q12080 455 aaKnown RBP9.36□□□□□ -0.91
LDH1YBR204C CHL1P22516 861 aaPredicted RBP9.35□□□□□ -0.91
LDH1YBR204C PRE3P38624 215 aa9.33□□□□□ -0.92
LDH1YBR204C SOL3P38858 249 aa9.29□□□□□ -0.92
LDH1YBR204C NST1P53935 1240 aa9.29□□□□□ -0.92
LDH1YBR204C AI4P03878 556 aa9.27□□□□□ -0.93
LDH1YBR204C MPH3P0CE00 602 aa9.27□□□□□ -0.93
LDH1YBR204C BCK2P33306 851 aa9.26□□□□□ -0.93
LDH1YBR204C ELP4Q02884 456 aaKnown RBP9.25□□□□□ -0.93
LDH1YBR204C MID1P41821 548 aa9.23□□□□□ -0.93
LDH1YBR204C YGR273CP53329 174 aa9.23□□□□□ -0.93
LDH1YBR204C PEX29Q03370 554 aa9.23□□□□□ -0.93
LDH1YBR204C SET1P38827 1080 aaKnown RBP9.19□□□□□ -0.94
LDH1YBR204C YDR344CQ05510 147 aa9.19□□□□□ -0.94
LDH1YBR204C ARH1P48360 493 aa9.18□□□□□ -0.94
LDH1YBR204C ILV3P39522 585 aaKnown RBP9.17□□□□□ -0.94
LDH1YBR204C RQC2Q12532 1038 aaKnown RBP9.16□□□□□ -0.94
LDH1YBR204C VRP1P37370 817 aa9.12□□□□□ -0.95
LDH1YBR204C SPT23P35210 1082 aa9.09□□□□□ -0.95
LDH1YBR204C HAP5Q02516 242 aa9.09□□□□□ -0.95
LDH1YBR204C SLI15P38283 698 aa9.07□□□□□ -0.96
LDH1YBR204C MPC54Q08550 464 aa9.07□□□□□ -0.96
LDH1YBR204C KEX1P09620 729 aa9.05□□□□□ -0.96
LDH1YBR204C XDJ1P39102 459 aa9.05□□□□□ -0.96
LDH1YBR204C IFH1P39520 1085 aa9.02□□□□□ -0.97
LDH1YBR204C BNI4P53858 892 aa9.02□□□□□ -0.97
LDH1YBR204C DPL1Q05567 589 aa9.02□□□□□ -0.97
LDH1YBR204C NMA111P53920 997 aa9.01□□□□□ -0.97
LDH1YBR204C PTC2P39966 464 aaKnown RBP9□□□□□ -0.97
LDH1YBR204C VHR2P40041 505 aa9□□□□□ -0.97
LDH1YBR204C YLR326WQ06170 240 aaKnown RBP8.98□□□□□ -0.97
LDH1YBR204C UBP14P38237 781 aaKnown RBP8.97□□□□□ -0.97
LDH1YBR204C YML082WQ04533 649 aaKnown RBP8.95□□□□□ -0.98
LDH1YBR204C RAD54P32863 898 aa8.94□□□□□ -0.98
LDH1YBR204C ISU2Q12056 156 aa8.93□□□□□ -0.98
LDH1YBR204C RPP1BP10622 106 aaKnown RBP8.91□□□□□ -0.98
LDH1YBR204C PCS60P38137 543 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
LDH1YBR204C CDC73Q06697 393 aa8.91□□□□□ -0.98
LDH1YBR204C DPS1P04802 557 aaKnown RBP8.88□□□□□ -0.99
LDH1YBR204C KIC1P38692 1080 aa8.88□□□□□ -0.99
LDH1YBR204C YPR148CQ06523 435 aa8.87□□□□□ -0.99
LDH1YBR204C REF2P42073 533 aaPredicted RBP8.84□□□□□ -0.99
LDH1YBR204C DMA1P38823 416 aa8.83□□□□□ -1
LDH1YBR204C YDR090CQ03193 310 aa8.83□□□□□ -1
LDH1YBR204C VPS70P47161 811 aa8.82□□□□□ -1
LDH1YBR204C YPR015CQ12531 247 aa8.79□□□□□ -1
LDH1YBR204C RAM1P22007 431 aa8.78□□□□□ -1
LDH1YBR204C PEX21P50091 288 aa8.77□□□□□ -1.01
LDH1YBR204C PDR1P12383 1068 aa8.76□□□□□ -1.01
LDH1YBR204C GYP1Q08484 637 aa8.76□□□□□ -1.01
LDH1YBR204C RGA2Q06407 1009 aa8.75□□□□□ -1.01
LDH1YBR204C MAK21Q12176 1025 aaKnown RBP8.73□□□□□ -1.01
LDH1YBR204C CSC1Q06538 782 aa8.71□□□□□ -1.02
LDH1YBR204C YRR1Q12172 810 aa8.7□□□□□ -1.02
LDH1YBR204C COX6P00427 148 aa8.69□□□□□ -1.02
LDH1YBR204C TFB4Q12004 338 aa8.69□□□□□ -1.02
LDH1YBR204C SAS4Q04003 481 aa8.68□□□□□ -1.02
LDH1YBR204C GAP1P19145 602 aaPredicted RBP8.67□□□□□ -1.02
LDH1YBR204C TUM1Q08686 304 aaKnown RBP8.66□□□□□ -1.02
LDH1YBR204C ORC6P38826 435 aa8.65□□□□□ -1.02
LDH1YBR204C CKB1P43639 278 aa8.63□□□□□ -1.03
LDH1YBR204C RAS1P01119 309 aa8.61□□□□□ -1.03
LDH1YBR204C AMS1P22855 1083 aa8.6□□□□□ -1.03
LDH1YBR204C NUD1P32336 851 aa8.6□□□□□ -1.03
LDH1YBR204C NPL4P33755 580 aa8.6□□□□□ -1.03
LDH1YBR204C PRT1P06103 763 aaKnown RBP8.59□□□□□ -1.03
LDH1YBR204C BUD20Q08004 166 aaPredicted RBP8.59□□□□□ -1.03
LDH1YBR204C PBS2P08018 668 aa8.58□□□□□ -1.04
LDH1YBR204C MRF1P30775 413 aaPredicted RBP8.58□□□□□ -1.04
LDH1YBR204C SRC1Q03707 834 aa8.58□□□□□ -1.04
LDH1YBR204C MVP1P40959 511 aaKnown RBP8.57□□□□□ -1.04
LDH1YBR204C STR2P47164 639 aa8.57□□□□□ -1.04
LDH1YBR204C YEL077CQ3E7X8 1277 aa8.57□□□□□ -1.04
LDH1YBR204C ISM1P48526 1002 aa8.56□□□□□ -1.04
LDH1YBR204C SDH2P21801 266 aa8.53□□□□□ -1.04
LDH1YBR204C YPR109WQ06104 294 aa8.53□□□□□ -1.04
LDH1YBR204C RGR1P19263 1082 aa8.52□□□□□ -1.05
LDH1YBR204C GCD11P32481 527 aaKnown RBP8.51□□□□□ -1.05
LDH1YBR204C ERG12P07277 443 aa8.49□□□□□ -1.05
LDH1YBR204C SAS10Q12136 610 aaPredicted RBP8.49□□□□□ -1.05
LDH1YBR204C MAM3Q12296 706 aa8.49□□□□□ -1.05
LDH1YBR204C SPT16P32558 1035 aaKnown RBP8.47□□□□□ -1.05
LDH1YBR204C PSE1P32337 1089 aaKnown RBP8.46□□□□□ -1.06
LDH1YBR204C TRK1P12685 1235 aa8.45□□□□□ -1.06
LDH1YBR204C TY1A-DR4O74302 440 aa8.44□□□□□ -1.06
LDH1YBR204C TY1A-HP0C2I4 478 aaKnown RBP8.44□□□□□ -1.06
LDH1YBR204C TY1A-AP0CX57 440 aa8.44□□□□□ -1.06
LDH1YBR204C TY1A-PR1P0CX58 440 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms