RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeastyeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMP1YBR182C JIP4Q03361 876 aa8.91□□□□□ -0.98
SMP1YBR182C MIF2P35201 549 aa8.89□□□□□ -0.99
SMP1YBR182C DAN4P47179 1161 aa8.87□□□□□ -0.99
SMP1YBR182C MAK11P20484 414 aaKnown RBP8.86□□□□□ -0.99
SMP1YBR182C GRE2Q12068 342 aaKnown RBP8.85□□□□□ -0.99
SMP1YBR182C PTC4P38089 393 aa8.84□□□□□ -0.99
SMP1YBR182C YEL023CP39992 682 aa8.83□□□□□ -1
SMP1YBR182C RAM2P29703 316 aa8.82□□□□□ -1
SMP1YBR182C SAP30P38429 201 aa8.81□□□□□ -1
SMP1YBR182C ATH1P48016 1211 aa8.81□□□□□ -1
SMP1YBR182C YDL129WQ07555 291 aa8.8□□□□□ -1
SMP1YBR182C PTC3P34221 468 aaKnown RBP8.75□□□□□ -1.01
SMP1YBR182C GUT1P32190 709 aa8.74□□□□□ -1.01
SMP1YBR182C COQ8P27697 501 aa8.73□□□□□ -1.01
SMP1YBR182C EDS1P38073 919 aa8.73□□□□□ -1.01
SMP1YBR182C CHL1P22516 861 aaPredicted RBP8.69□□□□□ -1.02
SMP1YBR182C PRE3P38624 215 aa8.67□□□□□ -1.02
SMP1YBR182C PML39Q03760 334 aa8.66□□□□□ -1.02
SMP1YBR182C BCK2P33306 851 aa8.64□□□□□ -1.03
SMP1YBR182C NOP53Q12080 455 aaKnown RBP8.62□□□□□ -1.03
SMP1YBR182C NST1P53935 1240 aa8.6□□□□□ -1.03
SMP1YBR182C ELP4Q02884 456 aaKnown RBP8.6□□□□□ -1.03
SMP1YBR182C PEX29Q03370 554 aa8.57□□□□□ -1.04
SMP1YBR182C YDR344CQ05510 147 aa8.57□□□□□ -1.04
SMP1YBR182C SOL3P38858 249 aa8.56□□□□□ -1.04
SMP1YBR182C AI4P03878 556 aa8.53□□□□□ -1.04
SMP1YBR182C MPH3P0CE00 602 aa8.53□□□□□ -1.04
SMP1YBR182C MID1P41821 548 aa8.52□□□□□ -1.05
SMP1YBR182C LEU3P08638 886 aa8.51□□□□□ -1.05
SMP1YBR182C ARH1P48360 493 aa8.5□□□□□ -1.05
SMP1YBR182C ILV3P39522 585 aaKnown RBP8.48□□□□□ -1.05
SMP1YBR182C YGR273CP53329 174 aa8.48□□□□□ -1.05
SMP1YBR182C VRP1P37370 817 aa8.48□□□□□ -1.05
SMP1YBR182C SET1P38827 1080 aaKnown RBP8.46□□□□□ -1.06
SMP1YBR182C XDJ1P39102 459 aa8.43□□□□□ -1.06
SMP1YBR182C SAS10Q12136 610 aaPredicted RBP8.43□□□□□ -1.06
SMP1YBR182C SPT23P35210 1082 aa8.42□□□□□ -1.06
SMP1YBR182C HAP5Q02516 242 aa8.41□□□□□ -1.06
SMP1YBR182C MPC54Q08550 464 aa8.36□□□□□ -1.07
SMP1YBR182C SLI15P38283 698 aa8.35□□□□□ -1.07
SMP1YBR182C PTC2P39966 464 aaKnown RBP8.35□□□□□ -1.07
SMP1YBR182C BNI4P53858 892 aa8.35□□□□□ -1.07
SMP1YBR182C KEX1P09620 729 aa8.33□□□□□ -1.08
SMP1YBR182C NMA111P53920 997 aa8.33□□□□□ -1.08
SMP1YBR182C DPL1Q05567 589 aa8.33□□□□□ -1.08
SMP1YBR182C IFH1P39520 1085 aa8.32□□□□□ -1.08
SMP1YBR182C DPS1P04802 557 aaKnown RBP8.28□□□□□ -1.08
SMP1YBR182C RPP1BP10622 106 aaKnown RBP8.28□□□□□ -1.08
SMP1YBR182C VHR2P40041 505 aa8.28□□□□□ -1.08
SMP1YBR182C YML082WQ04533 649 aaKnown RBP8.28□□□□□ -1.08
SMP1YBR182C ISU2Q12056 156 aa8.25□□□□□ -1.09
SMP1YBR182C RAD54P32863 898 aa8.24□□□□□ -1.09
SMP1YBR182C KIC1P38692 1080 aa8.24□□□□□ -1.09
SMP1YBR182C RPN1P38764 993 aaKnown RBP8.24□□□□□ -1.09
SMP1YBR182C UBP14P38237 781 aaKnown RBP8.23□□□□□ -1.09
SMP1YBR182C YLR326WQ06170 240 aaKnown RBP8.23□□□□□ -1.09
SMP1YBR182C RGA2Q06407 1009 aa8.23□□□□□ -1.09
SMP1YBR182C CDC73Q06697 393 aa8.21□□□□□ -1.1
SMP1YBR182C DMA2P53924 522 aa8.2□□□□□ -1.1
SMP1YBR182C PCS60P38137 543 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SMP1YBR182C PEX21P50091 288 aa8.15□□□□□ -1.1
SMP1YBR182C REF2P42073 533 aaPredicted RBP8.14□□□□□ -1.11
SMP1YBR182C GYP1Q08484 637 aa8.14□□□□□ -1.11
SMP1YBR182C YPR015CQ12531 247 aa8.14□□□□□ -1.11
SMP1YBR182C RAM1P22007 431 aa8.12□□□□□ -1.11
SMP1YBR182C VPS70P47161 811 aa8.11□□□□□ -1.11
SMP1YBR182C YPR148CQ06523 435 aa8.09□□□□□ -1.12
SMP1YBR182C PDR1P12383 1068 aa8.07□□□□□ -1.12
SMP1YBR182C YDR090CQ03193 310 aa8.07□□□□□ -1.12
SMP1YBR182C RLF2Q12495 606 aa8.07□□□□□ -1.12
SMP1YBR182C SRC1Q03707 834 aa8.06□□□□□ -1.12
SMP1YBR182C SPB4P25808 606 aaPredicted RBP8.04□□□□□ -1.12
SMP1YBR182C SAS4Q04003 481 aa8.04□□□□□ -1.12
SMP1YBR182C CSC1Q06538 782 aa8.03□□□□□ -1.12
SMP1YBR182C YRR1Q12172 810 aa8.03□□□□□ -1.12
SMP1YBR182C MAK21Q12176 1025 aaKnown RBP8.03□□□□□ -1.12
SMP1YBR182C CKB1P43639 278 aa8.01□□□□□ -1.13
SMP1YBR182C TFB4Q12004 338 aa8.01□□□□□ -1.13
SMP1YBR182C RAS1P01119 309 aa8□□□□□ -1.13
SMP1YBR182C COX6P00427 148 aa7.99□□□□□ -1.13
SMP1YBR182C NPL4P33755 580 aa7.99□□□□□ -1.13
SMP1YBR182C TUM1Q08686 304 aaKnown RBP7.99□□□□□ -1.13
SMP1YBR182C MRF1P30775 413 aaPredicted RBP7.98□□□□□ -1.13
SMP1YBR182C AMS1P22855 1083 aa7.97□□□□□ -1.13
SMP1YBR182C GAP1P19145 602 aaPredicted RBP7.95□□□□□ -1.14
SMP1YBR182C PRT1P06103 763 aaKnown RBP7.94□□□□□ -1.14
SMP1YBR182C YEL077CQ3E7X8 1277 aa7.94□□□□□ -1.14
SMP1YBR182C SDH2P21801 266 aa7.93□□□□□ -1.14
SMP1YBR182C NUD1P32336 851 aa7.92□□□□□ -1.14
SMP1YBR182C ORC6P38826 435 aa7.91□□□□□ -1.14
SMP1YBR182C BUD20Q08004 166 aaPredicted RBP7.91□□□□□ -1.14
SMP1YBR182C ERG12P07277 443 aa7.89□□□□□ -1.15
SMP1YBR182C PBS2P08018 668 aa7.89□□□□□ -1.15
SMP1YBR182C GCD11P32481 527 aaKnown RBP7.89□□□□□ -1.15
SMP1YBR182C MVP1P40959 511 aaKnown RBP7.89□□□□□ -1.15
SMP1YBR182C STR2P47164 639 aa7.89□□□□□ -1.15
SMP1YBR182C ISM1P48526 1002 aa7.87□□□□□ -1.15
SMP1YBR182C YPR109WQ06104 294 aa7.86□□□□□ -1.15
SMP1YBR182C TRK1P12685 1235 aa7.85□□□□□ -1.15
SMP1YBR182C SPT16P32558 1035 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms