RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C GRE2Q12068 342 aaKnown RBP7.92□□□□□ -1.14
RPB5YBR154C PTC4P38089 393 aa7.88□□□□□ -1.15
RPB5YBR154C YEL023CP39992 682 aa7.88□□□□□ -1.15
RPB5YBR154C DAN4P47179 1161 aa7.87□□□□□ -1.15
RPB5YBR154C ATH1P48016 1211 aa7.87□□□□□ -1.15
RPB5YBR154C COQ8P27697 501 aa7.86□□□□□ -1.15
RPB5YBR154C PTC3P34221 468 aaKnown RBP7.86□□□□□ -1.15
RPB5YBR154C GUT1P32190 709 aa7.85□□□□□ -1.15
RPB5YBR154C EDS1P38073 919 aa7.84□□□□□ -1.15
RPB5YBR154C YDL129WQ07555 291 aa7.81□□□□□ -1.16
RPB5YBR154C NOP53Q12080 455 aaKnown RBP7.81□□□□□ -1.16
RPB5YBR154C SAP30P38429 201 aa7.8□□□□□ -1.16
RPB5YBR154C CHL1P22516 861 aaPredicted RBP7.71□□□□□ -1.18
RPB5YBR154C PML39Q03760 334 aa7.71□□□□□ -1.18
RPB5YBR154C PRE3P38624 215 aa7.68□□□□□ -1.18
RPB5YBR154C AI4P03878 556 aa7.67□□□□□ -1.18
RPB5YBR154C MPH3P0CE00 602 aa7.66□□□□□ -1.18
RPB5YBR154C NST1P53935 1240 aa7.66□□□□□ -1.18
RPB5YBR154C SET1P38827 1080 aaKnown RBP7.65□□□□□ -1.18
RPB5YBR154C SOL3P38858 249 aa7.65□□□□□ -1.18
RPB5YBR154C YGR273CP53329 174 aa7.64□□□□□ -1.19
RPB5YBR154C ELP4Q02884 456 aaKnown RBP7.62□□□□□ -1.19
RPB5YBR154C PEX29Q03370 554 aa7.61□□□□□ -1.19
RPB5YBR154C YDR344CQ05510 147 aa7.61□□□□□ -1.19
RPB5YBR154C BCK2P33306 851 aa7.6□□□□□ -1.19
RPB5YBR154C MID1P41821 548 aa7.59□□□□□ -1.19
RPB5YBR154C ARH1P48360 493 aa7.58□□□□□ -1.2
RPB5YBR154C IFH1P39520 1085 aa7.56□□□□□ -1.2
RPB5YBR154C ILV3P39522 585 aaKnown RBP7.56□□□□□ -1.2
RPB5YBR154C HAP5Q02516 242 aa7.51□□□□□ -1.21
RPB5YBR154C SPT23P35210 1082 aa7.5□□□□□ -1.21
RPB5YBR154C VRP1P37370 817 aa7.5□□□□□ -1.21
RPB5YBR154C KEX1P09620 729 aa7.49□□□□□ -1.21
RPB5YBR154C SLI15P38283 698 aa7.49□□□□□ -1.21
RPB5YBR154C MPC54Q08550 464 aa7.49□□□□□ -1.21
RPB5YBR154C BNI4P53858 892 aa7.46□□□□□ -1.22
RPB5YBR154C DPL1Q05567 589 aa7.46□□□□□ -1.22
RPB5YBR154C XDJ1P39102 459 aa7.45□□□□□ -1.22
RPB5YBR154C VHR2P40041 505 aa7.44□□□□□ -1.22
RPB5YBR154C NMA111P53920 997 aa7.44□□□□□ -1.22
RPB5YBR154C RPP1BP10622 106 aaKnown RBP7.43□□□□□ -1.22
RPB5YBR154C UBP14P38237 781 aaKnown RBP7.43□□□□□ -1.22
RPB5YBR154C YLR326WQ06170 240 aaKnown RBP7.43□□□□□ -1.22
RPB5YBR154C PTC2P39966 464 aaKnown RBP7.42□□□□□ -1.22
RPB5YBR154C RAD54P32863 898 aa7.41□□□□□ -1.22
RPB5YBR154C YPR148CQ06523 435 aa7.4□□□□□ -1.22
RPB5YBR154C KIC1P38692 1080 aa7.39□□□□□ -1.23
RPB5YBR154C YML082WQ04533 649 aaKnown RBP7.39□□□□□ -1.23
RPB5YBR154C ISU2Q12056 156 aa7.39□□□□□ -1.23
RPB5YBR154C PCS60P38137 543 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
RPB5YBR154C REF2P42073 533 aaPredicted RBP7.36□□□□□ -1.23
RPB5YBR154C CDC73Q06697 393 aa7.35□□□□□ -1.23
RPB5YBR154C VPS70P47161 811 aa7.33□□□□□ -1.24
RPB5YBR154C YDR090CQ03193 310 aa7.31□□□□□ -1.24
RPB5YBR154C MAK21Q12176 1025 aaKnown RBP7.3□□□□□ -1.24
RPB5YBR154C DPS1P04802 557 aaKnown RBP7.29□□□□□ -1.24
RPB5YBR154C PEX21P50091 288 aa7.27□□□□□ -1.25
RPB5YBR154C COX6P00427 148 aa7.25□□□□□ -1.25
RPB5YBR154C CKB1P43639 278 aa7.25□□□□□ -1.25
RPB5YBR154C RAM1P22007 431 aa7.24□□□□□ -1.25
RPB5YBR154C CSC1Q06538 782 aa7.24□□□□□ -1.25
RPB5YBR154C GYP1Q08484 637 aa7.23□□□□□ -1.25
RPB5YBR154C TFB4Q12004 338 aa7.23□□□□□ -1.25
RPB5YBR154C YPR015CQ12531 247 aa7.22□□□□□ -1.25
RPB5YBR154C PDR1P12383 1068 aa7.21□□□□□ -1.26
RPB5YBR154C DMA1P38823 416 aa7.21□□□□□ -1.26
RPB5YBR154C SAS4Q04003 481 aa7.2□□□□□ -1.26
RPB5YBR154C GAP1P19145 602 aaPredicted RBP7.19□□□□□ -1.26
RPB5YBR154C YRR1Q12172 810 aa7.19□□□□□ -1.26
RPB5YBR154C ORC6P38826 435 aa7.18□□□□□ -1.26
RPB5YBR154C TUM1Q08686 304 aaKnown RBP7.17□□□□□ -1.26
RPB5YBR154C PBS2P08018 668 aa7.15□□□□□ -1.26
RPB5YBR154C NPL4P33755 580 aa7.13□□□□□ -1.27
RPB5YBR154C SAS10Q12136 610 aaPredicted RBP7.13□□□□□ -1.27
RPB5YBR154C MRF1P30775 413 aaPredicted RBP7.12□□□□□ -1.27
RPB5YBR154C MVP1P40959 511 aaKnown RBP7.12□□□□□ -1.27
RPB5YBR154C NUD1P32336 851 aa7.11□□□□□ -1.27
RPB5YBR154C PRT1P06103 763 aaKnown RBP7.1□□□□□ -1.27
RPB5YBR154C AMS1P22855 1083 aa7.09□□□□□ -1.27
RPB5YBR154C BUD20Q08004 166 aaPredicted RBP7.09□□□□□ -1.27
RPB5YBR154C MAM3Q12296 706 aa7.09□□□□□ -1.27
RPB5YBR154C STR2P47164 639 aa7.08□□□□□ -1.28
RPB5YBR154C YEL077CQ3E7X8 1277 aa7.08□□□□□ -1.28
RPB5YBR154C RGR1P19263 1082 aa7.07□□□□□ -1.28
RPB5YBR154C ISM1P48526 1002 aa7.07□□□□□ -1.28
RPB5YBR154C RAS1P01119 309 aa7.06□□□□□ -1.28
RPB5YBR154C YPR109WQ06104 294 aa7.06□□□□□ -1.28
RPB5YBR154C PSE1P32337 1089 aaKnown RBP7.05□□□□□ -1.28
RPB5YBR154C DSF2P38213 736 aa7.05□□□□□ -1.28
RPB5YBR154C GCD11P32481 527 aaKnown RBP7.04□□□□□ -1.28
RPB5YBR154C ERG12P07277 443 aa7.03□□□□□ -1.28
RPB5YBR154C CLB5P30283 435 aa7.03□□□□□ -1.28
RPB5YBR154C SPB4P25808 606 aaPredicted RBP7.02□□□□□ -1.29
RPB5YBR154C SRC1Q03707 834 aa7.02□□□□□ -1.29
RPB5YBR154C SDH2P21801 266 aa7.01□□□□□ -1.29
RPB5YBR154C SPT16P32558 1035 aaKnown RBP7.01□□□□□ -1.29
RPB5YBR154C PAT1P25644 796 aaKnown RBP7□□□□□ -1.29
RPB5YBR154C IES2P40154 320 aa7□□□□□ -1.29
RPB5YBR154C RQC2Q12532 1038 aaKnown RBP6.99□□□□□ -1.29
RPB5YBR154C TRK1P12685 1235 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms