RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C YDL129WQ07555 291 aa5.85□□□□□ -1.47
SPC72YAL047C HTA1P04911 132 aaKnown RBP5.85□□□□□ -1.47
SPC72YAL047C HTA2P04912 132 aa5.85□□□□□ -1.47
SPC72YAL047C CHL1P22516 861 aaPredicted RBP5.85□□□□□ -1.47
SPC72YAL047C COQ8P27697 501 aa5.84□□□□□ -1.47
SPC72YAL047C DCW1P36091 449 aa5.82□□□□□ -1.48
SPC72YAL047C PTC4P38089 393 aa5.82□□□□□ -1.48
SPC72YAL047C PRE3P38624 215 aa5.81□□□□□ -1.48
SPC72YAL047C YEL023CP39992 682 aa5.81□□□□□ -1.48
SPC72YAL047C GRE2Q12068 342 aaKnown RBP5.81□□□□□ -1.48
SPC72YAL047C EDS1P38073 919 aa5.8□□□□□ -1.48
SPC72YAL047C PTC3P34221 468 aaKnown RBP5.79□□□□□ -1.48
SPC72YAL047C ATH1P48016 1211 aa5.79□□□□□ -1.48
SPC72YAL047C SET1P38827 1080 aaKnown RBP5.77□□□□□ -1.49
SPC72YAL047C DMA1P38823 416 aa5.76□□□□□ -1.49
SPC72YAL047C RQC2Q12532 1038 aaKnown RBP5.76□□□□□ -1.49
SPC72YAL047C NOP53Q12080 455 aaKnown RBP5.75□□□□□ -1.49
SPC72YAL047C GUT1P32190 709 aa5.75□□□□□ -1.49
SPC72YAL047C VRP1P37370 817 aa5.71□□□□□ -1.5
SPC72YAL047C PML39Q03760 334 aa5.71□□□□□ -1.5
SPC72YAL047C XDJ1P39102 459 aa5.69□□□□□ -1.5
SPC72YAL047C IFH1P39520 1085 aa5.69□□□□□ -1.5
SPC72YAL047C ELP4Q02884 456 aaKnown RBP5.68□□□□□ -1.5
SPC72YAL047C YDR344CQ05510 147 aa5.67□□□□□ -1.5
SPC72YAL047C YGR273CP53329 174 aa5.63□□□□□ -1.51
SPC72YAL047C ARH1P48360 493 aa5.62□□□□□ -1.51
SPC72YAL047C DPS1P04802 557 aaKnown RBP5.61□□□□□ -1.51
SPC72YAL047C SOL3P38858 249 aa5.61□□□□□ -1.51
SPC72YAL047C VPS70P47161 811 aa5.61□□□□□ -1.51
SPC72YAL047C AI4P03878 556 aa5.6□□□□□ -1.51
SPC72YAL047C YPR148CQ06523 435 aa5.6□□□□□ -1.51
SPC72YAL047C MPH3P0CE00 602 aa5.6□□□□□ -1.51
SPC72YAL047C MID1P41821 548 aa5.6□□□□□ -1.51
SPC72YAL047C NST1P53935 1240 aa5.59□□□□□ -1.51
SPC72YAL047C VHR2P40041 505 aa5.57□□□□□ -1.52
SPC72YAL047C PEX29Q03370 554 aa5.57□□□□□ -1.52
SPC72YAL047C SPT23P35210 1082 aa5.56□□□□□ -1.52
SPC72YAL047C KEX1P09620 729 aa5.55□□□□□ -1.52
SPC72YAL047C ILV3P39522 585 aaKnown RBP5.54□□□□□ -1.52
SPC72YAL047C REF2P42073 533 aaPredicted RBP5.54□□□□□ -1.52
SPC72YAL047C RGA2Q06407 1009 aa5.54□□□□□ -1.52
SPC72YAL047C KIC1P38692 1080 aa5.53□□□□□ -1.52
SPC72YAL047C CKB1P43639 278 aa5.53□□□□□ -1.52
SPC72YAL047C HAP5Q02516 242 aa5.53□□□□□ -1.52
SPC72YAL047C YLR326WQ06170 240 aaKnown RBP5.53□□□□□ -1.52
SPC72YAL047C RAD54P32863 898 aa5.52□□□□□ -1.53
SPC72YAL047C SAS10Q12136 610 aaPredicted RBP5.52□□□□□ -1.53
SPC72YAL047C UBP14P38237 781 aaKnown RBP5.51□□□□□ -1.53
SPC72YAL047C SLI15P38283 698 aa5.5□□□□□ -1.53
SPC72YAL047C BNI4P53858 892 aa5.49□□□□□ -1.53
SPC72YAL047C RPP1BP10622 106 aaKnown RBP5.48□□□□□ -1.53
SPC72YAL047C PTC2P39966 464 aaKnown RBP5.48□□□□□ -1.53
SPC72YAL047C PCS60P38137 543 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
SPC72YAL047C YML082WQ04533 649 aaKnown RBP5.47□□□□□ -1.53
SPC72YAL047C MAK21Q12176 1025 aaKnown RBP5.47□□□□□ -1.53
SPC72YAL047C PBS2P08018 668 aa5.46□□□□□ -1.54
SPC72YAL047C MPC54Q08550 464 aa5.46□□□□□ -1.54
SPC72YAL047C YDR090CQ03193 310 aa5.45□□□□□ -1.54
SPC72YAL047C DPL1Q05567 589 aa5.45□□□□□ -1.54
SPC72YAL047C SPB4P25808 606 aaPredicted RBP5.45□□□□□ -1.54
SPC72YAL047C SRC1Q03707 834 aa5.44□□□□□ -1.54
SPC72YAL047C COX6P00427 148 aa5.43□□□□□ -1.54
SPC72YAL047C NMA111P53920 997 aa5.43□□□□□ -1.54
SPC72YAL047C CDC73Q06697 393 aa5.43□□□□□ -1.54
SPC72YAL047C PEX21P50091 288 aa5.41□□□□□ -1.54
SPC72YAL047C MAM3Q12296 706 aa5.41□□□□□ -1.54
SPC72YAL047C ISU2Q12056 156 aa5.4□□□□□ -1.55
SPC72YAL047C DSF2P38213 736 aa5.38□□□□□ -1.55
SPC72YAL047C ORC6P38826 435 aa5.36□□□□□ -1.55
SPC72YAL047C IES2P40154 320 aa5.36□□□□□ -1.55
SPC72YAL047C CSC1Q06538 782 aa5.36□□□□□ -1.55
SPC72YAL047C RAS1P01119 309 aa5.34□□□□□ -1.55
SPC72YAL047C TFB4Q12004 338 aa5.34□□□□□ -1.55
SPC72YAL047C YPR015CQ12531 247 aa5.34□□□□□ -1.55
SPC72YAL047C YRR1Q12172 810 aa5.32□□□□□ -1.56
SPC72YAL047C RGA1P39083 1007 aa5.32□□□□□ -1.56
SPC72YAL047C TUM1Q08686 304 aaKnown RBP5.32□□□□□ -1.56
SPC72YAL047C RAM1P22007 431 aa5.31□□□□□ -1.56
SPC72YAL047C GYP1Q08484 637 aa5.31□□□□□ -1.56
SPC72YAL047C PDR1P12383 1068 aa5.3□□□□□ -1.56
SPC72YAL047C GAP1P19145 602 aaPredicted RBP5.3□□□□□ -1.56
SPC72YAL047C PSE1P32337 1089 aaKnown RBP5.3□□□□□ -1.56
SPC72YAL047C MVP1P40959 511 aaKnown RBP5.3□□□□□ -1.56
SPC72YAL047C RGR1P19263 1082 aa5.28□□□□□ -1.56
SPC72YAL047C AMS1P22855 1083 aa5.28□□□□□ -1.56
SPC72YAL047C NPL4P33755 580 aa5.28□□□□□ -1.56
SPC72YAL047C NUP42P49686 430 aaKnown RBP5.28□□□□□ -1.56
SPC72YAL047C YPR109WQ06104 294 aa5.28□□□□□ -1.56
SPC72YAL047C TRK1P12685 1235 aa5.26□□□□□ -1.57
SPC72YAL047C DIT2P21595 489 aa5.26□□□□□ -1.57
SPC72YAL047C CLB5P30283 435 aa5.26□□□□□ -1.57
SPC72YAL047C NUD1P32336 851 aa5.26□□□□□ -1.57
SPC72YAL047C SAS4Q04003 481 aa5.25□□□□□ -1.57
SPC72YAL047C TEA1P47988 759 aa5.23□□□□□ -1.57
SPC72YAL047C ATF2P53296 535 aa5.23□□□□□ -1.57
SPC72YAL047C YNR021WP53723 404 aaKnown RBP5.22□□□□□ -1.57
SPC72YAL047C LEU3P08638 886 aa5.21□□□□□ -1.58
SPC72YAL047C STR2P47164 639 aa5.21□□□□□ -1.58
SPC72YAL047C ISM1P48526 1002 aa5.21□□□□□ -1.58
SPC72YAL047C SDH2P21801 266 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 146.9 ms