RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
CASC19-230ENST00000641421 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
CASC19-230ENST00000641421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
CASC19-230ENST00000641421 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
CASC19-230ENST00000641421 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
CASC19-230ENST00000641421 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.18
CASC19-230ENST00000641421 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
CASC19-230ENST00000641421 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
CASC19-230ENST00000641421 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
CASC19-230ENST00000641421 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
CASC19-230ENST00000641421 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
CASC19-230ENST00000641421 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
CASC19-230ENST00000641421 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CASC19-230ENST00000641421 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
CASC19-230ENST00000641421 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
CASC19-230ENST00000641421 PCF11O94913 1555 aaKnown RBP16.11■□□□□ 0.17
CASC19-230ENST00000641421 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
CASC19-230ENST00000641421 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.17
CASC19-230ENST00000641421 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
CASC19-230ENST00000641421 FMN1Q68DA7 1419 aa16.08■□□□□ 0.16
CASC19-230ENST00000641421 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
CASC19-230ENST00000641421 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
CASC19-230ENST00000641421 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
CASC19-230ENST00000641421 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
CASC19-230ENST00000641421 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
CASC19-230ENST00000641421 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
CASC19-230ENST00000641421 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
CASC19-230ENST00000641421 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
CASC19-230ENST00000641421 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
CASC19-230ENST00000641421 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
CASC19-230ENST00000641421 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
CASC19-230ENST00000641421 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
CASC19-230ENST00000641421 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
CASC19-230ENST00000641421 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
CASC19-230ENST00000641421 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
CASC19-230ENST00000641421 MTUS2Q5JR59 1369 aa15.89■□□□□ 0.13
CASC19-230ENST00000641421 CCDC18Q5T9S5 1454 aa15.88■□□□□ 0.13
CASC19-230ENST00000641421 LRRIQ1Q96JM4 1722 aa15.88■□□□□ 0.13
CASC19-230ENST00000641421 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
CASC19-230ENST00000641421 ITGAEP38570 1179 aa15.86■□□□□ 0.13
CASC19-230ENST00000641421 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
CASC19-230ENST00000641421 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
CASC19-230ENST00000641421 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
CASC19-230ENST00000641421 EHBP1L1Q8N3D4 1523 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
CASC19-230ENST00000641421 NUP160Q12769 1436 aa15.82■□□□□ 0.12
CASC19-230ENST00000641421 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
CASC19-230ENST00000641421 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
CASC19-230ENST00000641421 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
CASC19-230ENST00000641421 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
CASC19-230ENST00000641421 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
CASC19-230ENST00000641421 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
CASC19-230ENST00000641421 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.12
CASC19-230ENST00000641421 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
CASC19-230ENST00000641421 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
CASC19-230ENST00000641421 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
CASC19-230ENST00000641421 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
CASC19-230ENST00000641421 RAPGEF6Q8TEU7 1601 aa15.74■□□□□ 0.11
CASC19-230ENST00000641421 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
CASC19-230ENST00000641421 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
CASC19-230ENST00000641421 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
CASC19-230ENST00000641421 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
CASC19-230ENST00000641421 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
CASC19-230ENST00000641421 PLB1Q6P1J6 1458 aa15.65■□□□□ 0.1
CASC19-230ENST00000641421 MIA2Q96PC5 1412 aa15.64■□□□□ 0.09
CASC19-230ENST00000641421 CHD1O14646 1710 aa15.64■□□□□ 0.09
CASC19-230ENST00000641421 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
CASC19-230ENST00000641421 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
CASC19-230ENST00000641421 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
CASC19-230ENST00000641421 ABCA8O94911 1581 aa15.61■□□□□ 0.09
CASC19-230ENST00000641421 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
CASC19-230ENST00000641421 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
CASC19-230ENST00000641421 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
CASC19-230ENST00000641421 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
CASC19-230ENST00000641421 PTPRGP23470 1445 aa15.56■□□□□ 0.08
CASC19-230ENST00000641421 NAIPQ13075 1403 aa15.56■□□□□ 0.08
CASC19-230ENST00000641421 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
CASC19-230ENST00000641421 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CASC19-230ENST00000641421 ATP10BO94823 1461 aa15.53■□□□□ 0.08
CASC19-230ENST00000641421 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
CASC19-230ENST00000641421 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 ITSN2Q9NZM3 1697 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 KIF14Q15058 1648 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 RRP7BPQ9NSQ0 103 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 DAPK1P53355 1430 aa15.49■□□□□ 0.07
CASC19-230ENST00000641421 GPATCH8Q9UKJ3 1502 aaKnown RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 ABCC5O15440 1437 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms