RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
CASC19-230ENST00000641421 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
CASC19-230ENST00000641421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
CASC19-230ENST00000641421 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
CASC19-230ENST00000641421 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
CASC19-230ENST00000641421 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.18
CASC19-230ENST00000641421 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
CASC19-230ENST00000641421 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
CASC19-230ENST00000641421 P3H3Q8IVL6 736 aa16.15■□□□□ 0.18
CASC19-230ENST00000641421 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
CASC19-230ENST00000641421 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
CASC19-230ENST00000641421 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
CASC19-230ENST00000641421 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CASC19-230ENST00000641421 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
CASC19-230ENST00000641421 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
CASC19-230ENST00000641421 PCF11O94913 1555 aaKnown RBP16.11■□□□□ 0.17
CASC19-230ENST00000641421 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
CASC19-230ENST00000641421 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.17
CASC19-230ENST00000641421 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
CASC19-230ENST00000641421 FMN1Q68DA7 1419 aa16.08■□□□□ 0.16
CASC19-230ENST00000641421 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
CASC19-230ENST00000641421 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
CASC19-230ENST00000641421 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
CASC19-230ENST00000641421 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
CASC19-230ENST00000641421 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
CASC19-230ENST00000641421 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
CASC19-230ENST00000641421 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
CASC19-230ENST00000641421 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
CASC19-230ENST00000641421 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
CASC19-230ENST00000641421 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
CASC19-230ENST00000641421 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
CASC19-230ENST00000641421 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
CASC19-230ENST00000641421 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
CASC19-230ENST00000641421 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
CASC19-230ENST00000641421 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
CASC19-230ENST00000641421 MTUS2Q5JR59 1369 aa15.89■□□□□ 0.13
CASC19-230ENST00000641421 CCDC18Q5T9S5 1454 aa15.88■□□□□ 0.13
CASC19-230ENST00000641421 LRRIQ1Q96JM4 1722 aa15.88■□□□□ 0.13
CASC19-230ENST00000641421 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
CASC19-230ENST00000641421 ITGAEP38570 1179 aa15.86■□□□□ 0.13
CASC19-230ENST00000641421 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
CASC19-230ENST00000641421 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
CASC19-230ENST00000641421 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
CASC19-230ENST00000641421 EHBP1L1Q8N3D4 1523 aa15.84■□□□□ 0.13
CASC19-230ENST00000641421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
CASC19-230ENST00000641421 NUP160Q12769 1436 aa15.82■□□□□ 0.12
CASC19-230ENST00000641421 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
CASC19-230ENST00000641421 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
CASC19-230ENST00000641421 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
CASC19-230ENST00000641421 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
CASC19-230ENST00000641421 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
CASC19-230ENST00000641421 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
CASC19-230ENST00000641421 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.12
CASC19-230ENST00000641421 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
CASC19-230ENST00000641421 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
CASC19-230ENST00000641421 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
CASC19-230ENST00000641421 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
CASC19-230ENST00000641421 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
CASC19-230ENST00000641421 RAPGEF6Q8TEU7 1601 aa15.74■□□□□ 0.11
CASC19-230ENST00000641421 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
CASC19-230ENST00000641421 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
CASC19-230ENST00000641421 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
CASC19-230ENST00000641421 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
CASC19-230ENST00000641421 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
CASC19-230ENST00000641421 PLB1Q6P1J6 1458 aa15.65■□□□□ 0.1
CASC19-230ENST00000641421 MIA2Q96PC5 1412 aa15.64■□□□□ 0.09
CASC19-230ENST00000641421 CHD1O14646 1710 aa15.64■□□□□ 0.09
CASC19-230ENST00000641421 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
CASC19-230ENST00000641421 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
CASC19-230ENST00000641421 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
CASC19-230ENST00000641421 ABCA8O94911 1581 aa15.61■□□□□ 0.09
CASC19-230ENST00000641421 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
CASC19-230ENST00000641421 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
CASC19-230ENST00000641421 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
CASC19-230ENST00000641421 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
CASC19-230ENST00000641421 PTPRGP23470 1445 aa15.56■□□□□ 0.08
CASC19-230ENST00000641421 NAIPQ13075 1403 aa15.56■□□□□ 0.08
CASC19-230ENST00000641421 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
CASC19-230ENST00000641421 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CASC19-230ENST00000641421 ATP10BO94823 1461 aa15.53■□□□□ 0.08
CASC19-230ENST00000641421 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
CASC19-230ENST00000641421 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
CASC19-230ENST00000641421 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 ITSN2Q9NZM3 1697 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 KIF14Q15058 1648 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 RRP7BPQ9NSQ0 103 aa15.5■□□□□ 0.07
CASC19-230ENST00000641421 DAPK1P53355 1430 aa15.49■□□□□ 0.07
CASC19-230ENST00000641421 GPATCH8Q9UKJ3 1502 aaKnown RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
CASC19-230ENST00000641421 ABCC5O15440 1437 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
CASC19-230ENST00000641421 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms