RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
PHGDH-212ENST00000641247 DIP2BQ9P265 1576 aa17.77■□□□□ 0.44
PHGDH-212ENST00000641247 MAPKBP1O60336 1514 aa17.77■□□□□ 0.43
PHGDH-212ENST00000641247 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
PHGDH-212ENST00000641247 KDM6BO15054 1643 aa17.72■□□□□ 0.43
PHGDH-212ENST00000641247 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
PHGDH-212ENST00000641247 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
PHGDH-212ENST00000641247 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
PHGDH-212ENST00000641247 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
PHGDH-212ENST00000641247 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
PHGDH-212ENST00000641247 COL17A1Q9UMD9 1497 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-212ENST00000641247 TSPOAP1O95153 1857 aa17.6■□□□□ 0.41
PHGDH-212ENST00000641247 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
PHGDH-212ENST00000641247 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-212ENST00000641247 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
PHGDH-212ENST00000641247 IGF1RP08069 1367 aa17.55■□□□□ 0.4
PHGDH-212ENST00000641247 PTPRGP23470 1445 aa17.55■□□□□ 0.4
PHGDH-212ENST00000641247 ASXL2Q76L83 1435 aa17.51■□□□□ 0.39
PHGDH-212ENST00000641247 PPRC1Q5VV67 1664 aaKnown RBP17.51■□□□□ 0.39
PHGDH-212ENST00000641247 HECW2Q9P2P5 1572 aa17.5■□□□□ 0.39
PHGDH-212ENST00000641247 ABCC2Q92887 1545 aa17.48■□□□□ 0.39
PHGDH-212ENST00000641247 GLI2P10070 1586 aa17.46■□□□□ 0.39
PHGDH-212ENST00000641247 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
PHGDH-212ENST00000641247 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
PHGDH-212ENST00000641247 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
PHGDH-212ENST00000641247 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
PHGDH-212ENST00000641247 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
PHGDH-212ENST00000641247 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
PHGDH-212ENST00000641247 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
PHGDH-212ENST00000641247 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
PHGDH-212ENST00000641247 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
PHGDH-212ENST00000641247 CUL7Q14999 1698 aa17.33■□□□□ 0.37
PHGDH-212ENST00000641247 DISP1Q96F81 1524 aa17.33■□□□□ 0.37
PHGDH-212ENST00000641247 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.37
PHGDH-212ENST00000641247 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
PHGDH-212ENST00000641247 TEX14Q8IWB6 1497 aa17.29■□□□□ 0.36
PHGDH-212ENST00000641247 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
PHGDH-212ENST00000641247 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
PHGDH-212ENST00000641247 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
PHGDH-212ENST00000641247 CD109Q6YHK3 1445 aa17.21■□□□□ 0.34
PHGDH-212ENST00000641247 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
PHGDH-212ENST00000641247 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
PHGDH-212ENST00000641247 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
PHGDH-212ENST00000641247 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
PHGDH-212ENST00000641247 KIF21BO75037 1637 aa17.13■□□□□ 0.33
PHGDH-212ENST00000641247 PTPRMP28827 1452 aa17.12■□□□□ 0.33
PHGDH-212ENST00000641247 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
PHGDH-212ENST00000641247 RAPGEF3O95398 923 aa17.08■□□□□ 0.32
PHGDH-212ENST00000641247 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
PHGDH-212ENST00000641247 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
PHGDH-212ENST00000641247 ABCA8O94911 1581 aa17.05■□□□□ 0.32
PHGDH-212ENST00000641247 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
PHGDH-212ENST00000641247 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
PHGDH-212ENST00000641247 LMTK3Q96Q04 1460 aa17.02■□□□□ 0.32
PHGDH-212ENST00000641247 HSPA2P54652 639 aa17.02■□□□□ 0.32
PHGDH-212ENST00000641247 ILDR2Q71H61 639 aa17■□□□□ 0.31
PHGDH-212ENST00000641247 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
PHGDH-212ENST00000641247 ATP10BO94823 1461 aa16.98■□□□□ 0.31
PHGDH-212ENST00000641247 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-212ENST00000641247 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
PHGDH-212ENST00000641247 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
PHGDH-212ENST00000641247 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
PHGDH-212ENST00000641247 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
PHGDH-212ENST00000641247 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
PHGDH-212ENST00000641247 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
PHGDH-212ENST00000641247 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
PHGDH-212ENST00000641247 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.3
PHGDH-212ENST00000641247 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
PHGDH-212ENST00000641247 NEO1Q92859 1461 aa16.87■□□□□ 0.29
PHGDH-212ENST00000641247 SOCS7O14512 581 aa16.87■□□□□ 0.29
PHGDH-212ENST00000641247 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
PHGDH-212ENST00000641247 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
PHGDH-212ENST00000641247 RIMS1Q86UR5 1692 aaKnown RBP16.82■□□□□ 0.28
PHGDH-212ENST00000641247 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
PHGDH-212ENST00000641247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-212ENST00000641247 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
PHGDH-212ENST00000641247 MLECQ14165 292 aa16.8■□□□□ 0.28
PHGDH-212ENST00000641247 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
PHGDH-212ENST00000641247 SIGLEC1Q9BZZ2 1709 aa16.78■□□□□ 0.28
PHGDH-212ENST00000641247 DENND4BO75064 1496 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-212ENST00000641247 FHOD3Q2V2M9 1422 aa16.77■□□□□ 0.27
PHGDH-212ENST00000641247 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
PHGDH-212ENST00000641247 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
PHGDH-212ENST00000641247 CEBPAP49715 358 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-212ENST00000641247 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
PHGDH-212ENST00000641247 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-212ENST00000641247 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
PHGDH-212ENST00000641247 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
PHGDH-212ENST00000641247 FANCAO15360 1455 aa16.7■□□□□ 0.26
PHGDH-212ENST00000641247 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
PHGDH-212ENST00000641247 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
PHGDH-212ENST00000641247 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-212ENST00000641247 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
PHGDH-212ENST00000641247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.266e-6■■■■■ 38.2
PHGDH-212ENST00000641247 SAMD9Q5K651 1589 aa16.67■□□□□ 0.26
PHGDH-212ENST00000641247 ZMYM4Q5VZL5 1548 aa16.65■□□□□ 0.26
PHGDH-212ENST00000641247 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
PHGDH-212ENST00000641247 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
PHGDH-212ENST00000641247 SCAPERQ9BY12 1400 aa16.63■□□□□ 0.25
PHGDH-212ENST00000641247 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms