RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
PHGDH-209ENST00000641074 PPARGC1BQ86YN6 1023 aaKnown RBP28.56■■■□□ 2.16
PHGDH-209ENST00000641074 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.15
PHGDH-209ENST00000641074 TRIM26Q12899 539 aaPredicted RBP28.5■■■□□ 2.15
PHGDH-209ENST00000641074 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
PHGDH-209ENST00000641074 GRIN2AQ12879 1464 aa28.49■■■□□ 2.15
PHGDH-209ENST00000641074 EFCAB5A4FU69 1503 aa28.47■■■□□ 2.15
PHGDH-209ENST00000641074 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
PHGDH-209ENST00000641074 P3H3Q8IVL6 736 aa28.42■■■□□ 2.14
PHGDH-209ENST00000641074 IQGAP2Q13576 1575 aa28.4■■■□□ 2.14
PHGDH-209ENST00000641074 FBLN2P98095 1184 aa28.38■■■□□ 2.13
PHGDH-209ENST00000641074 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
PHGDH-209ENST00000641074 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
PHGDH-209ENST00000641074 APLP2Q06481 763 aa28.36■■■□□ 2.13
PHGDH-209ENST00000641074 KIAA0586Q9BVV6 1533 aa28.35■■■□□ 2.13
PHGDH-209ENST00000641074 TTBK1Q5TCY1 1321 aaPredicted RBP28.33■■■□□ 2.12
PHGDH-209ENST00000641074 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
PHGDH-209ENST00000641074 NUP160Q12769 1436 aa28.29■■■□□ 2.12
PHGDH-209ENST00000641074 UGGT2Q9NYU1 1516 aa28.27■■■□□ 2.12
PHGDH-209ENST00000641074 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
PHGDH-209ENST00000641074 PCF11O94913 1555 aaKnown RBP28.21■■■□□ 2.11
PHGDH-209ENST00000641074 CHD1O14646 1710 aa28.18■■■□□ 2.1
PHGDH-209ENST00000641074 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
PHGDH-209ENST00000641074 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
PHGDH-209ENST00000641074 KANK4Q5T7N3 995 aaPredicted RBP28.16■■■□□ 2.1
PHGDH-209ENST00000641074 DISP1Q96F81 1524 aa28.15■■■□□ 2.1
PHGDH-209ENST00000641074 MAP3K1Q13233 1512 aa28.14■■■□□ 2.09
PHGDH-209ENST00000641074 KIAA0556O60303 1618 aa28.12■■■□□ 2.09
PHGDH-209ENST00000641074 TIAM1Q13009 1591 aa28.12■■■□□ 2.09
PHGDH-209ENST00000641074 ATP1B4Q9UN42 357 aaPredicted RBP28.11■■■□□ 2.09
PHGDH-209ENST00000641074 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
PHGDH-209ENST00000641074 CFAP43Q8NDM7 1665 aa28.04■■■□□ 2.08
PHGDH-209ENST00000641074 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
PHGDH-209ENST00000641074 CARMIL2Q6F5E8 1435 aa27.99■■■□□ 2.07
PHGDH-209ENST00000641074 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
PHGDH-209ENST00000641074 HECW1Q76N89 1606 aa27.92■■■□□ 2.06
PHGDH-209ENST00000641074 PRG4Q92954 1404 aaPredicted RBP27.91■■■□□ 2.06
PHGDH-209ENST00000641074 SHROOM2Q13796 1616 aa27.88■■■□□ 2.05
PHGDH-209ENST00000641074 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
PHGDH-209ENST00000641074 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
PHGDH-209ENST00000641074 EPRSP07814 1512 aaKnown RBP27.84■■■□□ 2.05
PHGDH-209ENST00000641074 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
PHGDH-209ENST00000641074 NUP153P49790 1475 aaKnown RBP27.8■■■□□ 2.04
PHGDH-209ENST00000641074 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
PHGDH-209ENST00000641074 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
PHGDH-209ENST00000641074 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
PHGDH-209ENST00000641074 CDK13Q14004 1512 aaKnown RBP27.78■■■□□ 2.04
PHGDH-209ENST00000641074 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
PHGDH-209ENST00000641074 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
PHGDH-209ENST00000641074 MAGI3Q5TCQ9 1506 aa27.75■■■□□ 2.03
PHGDH-209ENST00000641074 PTPRGP23470 1445 aa27.73■■■□□ 2.03
PHGDH-209ENST00000641074 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
PHGDH-209ENST00000641074 EHBP1L1Q8N3D4 1523 aa27.73■■■□□ 2.03
PHGDH-209ENST00000641074 ABCA8O94911 1581 aa27.72■■■□□ 2.03
PHGDH-209ENST00000641074 CCNB3Q8WWL7 1395 aa27.71■■■□□ 2.03
PHGDH-209ENST00000641074 HNRNPUL2Q1KMD3 747 aaKnown RBP27.68■■■□□ 2.02
PHGDH-209ENST00000641074 SUPT6HQ7KZ85 1726 aaKnown RBP27.66■■■□□ 2.02
PHGDH-209ENST00000641074 NCOA2Q15596 1464 aa27.65■■■□□ 2.02
PHGDH-209ENST00000641074 HRCP23327 699 aa27.65■■■□□ 2.02
PHGDH-209ENST00000641074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.63■■■□□ 2.01
PHGDH-209ENST00000641074 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
PHGDH-209ENST00000641074 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
PHGDH-209ENST00000641074 CDK11AQ9UQ88 783 aaPredicted RBP27.59■■■□□ 2.01
PHGDH-209ENST00000641074 UACAQ9BZF9 1416 aa27.57■■■□□ 2
PHGDH-209ENST00000641074 ATP10BO94823 1461 aa27.56■■■□□ 2
PHGDH-209ENST00000641074 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
PHGDH-209ENST00000641074 MYOM3Q5VTT5 1437 aa27.53■■■□□ 2
PHGDH-209ENST00000641074 FAM50AQ14320 339 aaKnown RBP27.51■■□□□ 1.99
PHGDH-209ENST00000641074 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
PHGDH-209ENST00000641074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.48■■□□□ 1.99
PHGDH-209ENST00000641074 ITGAEP38570 1179 aa27.48■■□□□ 1.99
PHGDH-209ENST00000641074 ABCC2Q92887 1545 aa27.47■■□□□ 1.99
PHGDH-209ENST00000641074 PLEKHD1A6NEE1 506 aa27.44■■□□□ 1.98
PHGDH-209ENST00000641074 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
PHGDH-209ENST00000641074 UHRF1BP1LA0JNW5 1464 aa27.4■■□□□ 1.98
PHGDH-209ENST00000641074 KIF14Q15058 1648 aa27.39■■□□□ 1.98
PHGDH-209ENST00000641074 PTPN23Q9H3S7 1636 aa27.39■■□□□ 1.98
PHGDH-209ENST00000641074 CCER1Q8TC90 406 aaPredicted RBP27.38■■□□□ 1.97
PHGDH-209ENST00000641074 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
PHGDH-209ENST00000641074 TCOF1Q13428 1488 aaKnown RBP27.35■■□□□ 1.97
PHGDH-209ENST00000641074 ZEB1P37275 1124 aaPredicted RBP27.3■■□□□ 1.96
PHGDH-209ENST00000641074 KDM5BQ9UGL1 1544 aa27.3■■□□□ 1.96
PHGDH-209ENST00000641074 ZCCHC11Q5TAX3 1644 aaKnown RBP27.29■■□□□ 1.96
PHGDH-209ENST00000641074 GPATCH8Q9UKJ3 1502 aaKnown RBP27.29■■□□□ 1.96
PHGDH-209ENST00000641074 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
PHGDH-209ENST00000641074 PTPRKQ15262 1439 aa27.26■■□□□ 1.95
PHGDH-209ENST00000641074 ITSN2Q9NZM3 1697 aa27.26■■□□□ 1.95
PHGDH-209ENST00000641074 CFDP1Q9UEE9 299 aaPredicted RBP27.22■■□□□ 1.95
PHGDH-209ENST00000641074 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
PHGDH-209ENST00000641074 ZNF644Q9H582 1327 aaPredicted RBP27.21■■□□□ 1.95
PHGDH-209ENST00000641074 CDC42BPAQ5VT25 1732 aa27.2■■□□□ 1.94
PHGDH-209ENST00000641074 RAB3GAP2Q9H2M9 1393 aa27.19■■□□□ 1.94
PHGDH-209ENST00000641074 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
PHGDH-209ENST00000641074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.13■■□□□ 1.936e-6■■■■■ 38.2
PHGDH-209ENST00000641074 KCNH8Q96L42 1107 aa27.12■■□□□ 1.93
PHGDH-209ENST00000641074 ZNF777Q9ULD5 760 aaPredicted RBP27.12■■□□□ 1.93
PHGDH-209ENST00000641074 TTC37Q6PGP7 1564 aa27.11■■□□□ 1.93
PHGDH-209ENST00000641074 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
PHGDH-209ENST00000641074 HFM1A2PYH4 1435 aa27.1■■□□□ 1.93
PHGDH-209ENST00000641074 DAPK1P53355 1430 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms