RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
TRPS1-212ENST00000640765 TMC1Q8TDI8 760 aa11□□□□□ -0.65
TRPS1-212ENST00000640765 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
TRPS1-212ENST00000640765 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
TRPS1-212ENST00000640765 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
TRPS1-212ENST00000640765 APPP05067 770 aa10.99□□□□□ -0.65
TRPS1-212ENST00000640765 DEKP35659 375 aaKnown RBP10.98□□□□□ -0.65
TRPS1-212ENST00000640765 ARID4BQ4LE39 1312 aaPredicted RBP10.98□□□□□ -0.65
TRPS1-212ENST00000640765 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRPS1-212ENST00000640765 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
TRPS1-212ENST00000640765 GOLGA6L4A6NEF3 574 aa10.97□□□□□ -0.65
TRPS1-212ENST00000640765 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
TRPS1-212ENST00000640765 RSPH6AQ9H0K4 717 aa10.94□□□□□ -0.66
TRPS1-212ENST00000640765 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-212ENST00000640765 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
TRPS1-212ENST00000640765 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
TRPS1-212ENST00000640765 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
TRPS1-212ENST00000640765 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
TRPS1-212ENST00000640765 ARID3AQ99856 593 aa10.91□□□□□ -0.66
TRPS1-212ENST00000640765 SALL2Q9Y467 1007 aaPredicted RBP10.9□□□□□ -0.67
TRPS1-212ENST00000640765 GOLGA6L3A6NEY3 463 aa10.89□□□□□ -0.67
TRPS1-212ENST00000640765 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
TRPS1-212ENST00000640765 SYAP1Q96A49 352 aaPredicted RBP10.86□□□□□ -0.67
TRPS1-212ENST00000640765 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
TRPS1-212ENST00000640765 IRX6P78412 446 aaPredicted RBP10.85□□□□□ -0.67
TRPS1-212ENST00000640765 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
TRPS1-212ENST00000640765 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
TRPS1-212ENST00000640765 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
TRPS1-212ENST00000640765 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
TRPS1-212ENST00000640765 FGD1P98174 961 aa10.84□□□□□ -0.67
TRPS1-212ENST00000640765 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
TRPS1-212ENST00000640765 DDX10Q13206 875 aaKnown RBP10.84□□□□□ -0.67
TRPS1-212ENST00000640765 GPS2Q13227 327 aa10.83□□□□□ -0.68
TRPS1-212ENST00000640765 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
TRPS1-212ENST00000640765 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
TRPS1-212ENST00000640765 HTATSF1O43719 755 aaKnown RBP10.83□□□□□ -0.68
TRPS1-212ENST00000640765 CLSTN1O94985 981 aa10.82□□□□□ -0.68
TRPS1-212ENST00000640765 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
TRPS1-212ENST00000640765 CHMP4BQ9H444 224 aaKnown RBP10.82□□□□□ -0.68
TRPS1-212ENST00000640765 TPM4P67936 248 aa10.82□□□□□ -0.68
TRPS1-212ENST00000640765 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-212ENST00000640765 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
TRPS1-212ENST00000640765 TEX35Q5T0J7 233 aa10.8□□□□□ -0.68
TRPS1-212ENST00000640765 MCCP23508 829 aa10.79□□□□□ -0.68
TRPS1-212ENST00000640765 PHF14O94880 888 aa10.78□□□□□ -0.68
TRPS1-212ENST00000640765 KCNJ4P48050 445 aa10.77□□□□□ -0.69
TRPS1-212ENST00000640765 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
TRPS1-212ENST00000640765 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
TRPS1-212ENST00000640765 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
TRPS1-212ENST00000640765 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
TRPS1-212ENST00000640765 CCDC34Q96HJ3 373 aa10.75□□□□□ -0.69
TRPS1-212ENST00000640765 HMMRO75330 724 aa10.75□□□□□ -0.69
TRPS1-212ENST00000640765 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
TRPS1-212ENST00000640765 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
TRPS1-212ENST00000640765 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
TRPS1-212ENST00000640765 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
TRPS1-212ENST00000640765 MS4A1P11836 297 aa10.72□□□□□ -0.69
TRPS1-212ENST00000640765 TPM3P06753 285 aa10.72□□□□□ -0.69
TRPS1-212ENST00000640765 CALD1Q05682 793 aaKnown RBP10.72□□□□□ -0.69
TRPS1-212ENST00000640765 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
TRPS1-212ENST00000640765 MAP7D2Q96T17 732 aa10.71□□□□□ -0.69
TRPS1-212ENST00000640765 CWC15Q9P013 229 aaKnown RBP10.7□□□□□ -0.7
TRPS1-212ENST00000640765 PKNOX2Q96KN3 472 aa10.7□□□□□ -0.7
TRPS1-212ENST00000640765 CEP89Q96ST8 783 aa10.7□□□□□ -0.7
TRPS1-212ENST00000640765 RDXP35241 583 aaKnown RBP10.7□□□□□ -0.7
TRPS1-212ENST00000640765 CCDC191Q8NCU4 936 aa10.7□□□□□ -0.7
TRPS1-212ENST00000640765 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
TRPS1-212ENST00000640765 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
TRPS1-212ENST00000640765 RGS3P49796 1198 aa10.69□□□□□ -0.7
TRPS1-212ENST00000640765 MIER1Q8N108 512 aa10.69□□□□□ -0.7
TRPS1-212ENST00000640765 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
TRPS1-212ENST00000640765 TAF7LQ5H9L4 462 aa10.69□□□□□ -0.7
TRPS1-212ENST00000640765 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
TRPS1-212ENST00000640765 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
TRPS1-212ENST00000640765 MTERF4Q7Z6M4 381 aaKnown RBP10.68□□□□□ -0.7
TRPS1-212ENST00000640765 MEX3CQ5U5Q3 659 aaKnown RBP10.68□□□□□ -0.7
TRPS1-212ENST00000640765 GZF1Q9H116 711 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-212ENST00000640765 NEFHP12036 1026 aa10.68□□□□□ -0.7
TRPS1-212ENST00000640765 CCDC66A2RUB6 948 aa10.66□□□□□ -0.7
TRPS1-212ENST00000640765 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
TRPS1-212ENST00000640765 OS9Q13438 667 aaPredicted RBP10.65□□□□□ -0.7
TRPS1-212ENST00000640765 CFAP53Q96M91 514 aa10.64□□□□□ -0.71
TRPS1-212ENST00000640765 TSR1Q2NL82 804 aaKnown RBP10.64□□□□□ -0.71
TRPS1-212ENST00000640765 DCTN1Q14203 1278 aa10.63□□□□□ -0.71
TRPS1-212ENST00000640765 CDR1P51861 262 aa10.63□□□□□ -0.71
TRPS1-212ENST00000640765 AK7Q96M32 723 aa10.63□□□□□ -0.71
TRPS1-212ENST00000640765 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
TRPS1-212ENST00000640765 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
TRPS1-212ENST00000640765 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
TRPS1-212ENST00000640765 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-212ENST00000640765 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
TRPS1-212ENST00000640765 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
TRPS1-212ENST00000640765 A0A0G2JS52 829 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 H0YHG0 523 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 RUFY1Q96T51 708 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 DYDC1Q8WWB3 177 aa10.6□□□□□ -0.71
TRPS1-212ENST00000640765 CCAR2Q8N163 923 aaKnown RBP10.59□□□□□ -0.71
TRPS1-212ENST00000640765 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■■■■ 26.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms