RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 EIF5BO60841 1220 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 CCDC88BA6NC98 1476 aa6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 TOP2AP11388 1531 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-230ENST00000640657 FAM9BQ8IZU0 186 aa6.72□□□□□ -1.33
HNRNPU-230ENST00000640657 NPM2Q86SE8 214 aaKnown RBP6.71□□□□□ -1.34
HNRNPU-230ENST00000640657 IPO9Q96P70 1041 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-230ENST00000640657 KIF27Q86VH2 1401 aa6.69□□□□□ -1.34
HNRNPU-230ENST00000640657 IRX6P78412 446 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-230ENST00000640657 PPP1R15AO75807 674 aaPredicted RBP6.68□□□□□ -1.34
HNRNPU-230ENST00000640657 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
HNRNPU-230ENST00000640657 NEFMP07197 916 aa6.68□□□□□ -1.34
HNRNPU-230ENST00000640657 FHAD1B1AJZ9 1412 aa6.68□□□□□ -1.34
HNRNPU-230ENST00000640657 TCERG1O14776 1098 aaKnown RBP6.67□□□□□ -1.34
HNRNPU-230ENST00000640657 TMC1Q8TDI8 760 aa6.67□□□□□ -1.34
HNRNPU-230ENST00000640657 RAB3GAP2Q9H2M9 1393 aa6.67□□□□□ -1.34
HNRNPU-230ENST00000640657 ABCC8Q09428 1581 aa6.66□□□□□ -1.34
HNRNPU-230ENST00000640657 UPF2Q9HAU5 1272 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-230ENST00000640657 PEG3Q9GZU2 1588 aa6.66□□□□□ -1.34
HNRNPU-230ENST00000640657 WIZO95785 1651 aa6.65□□□□□ -1.35
HNRNPU-230ENST00000640657 BECN1Q14457 450 aa6.65□□□□□ -1.35
HNRNPU-230ENST00000640657 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
HNRNPU-230ENST00000640657 KIF21BO75037 1637 aa6.64□□□□□ -1.35
HNRNPU-230ENST00000640657 SIN3AQ96ST3 1273 aa6.64□□□□□ -1.35
HNRNPU-230ENST00000640657 ANP32BQ92688 251 aaKnown RBP6.64□□□□□ -1.35
HNRNPU-230ENST00000640657 L1TD1Q5T7N2 865 aaKnown RBP6.63□□□□□ -1.35
HNRNPU-230ENST00000640657 MTUS2Q5JR59 1369 aa6.63□□□□□ -1.35
HNRNPU-230ENST00000640657 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
HNRNPU-230ENST00000640657 RRBP1Q9P2E9 1410 aaKnown RBP6.62□□□□□ -1.35
HNRNPU-230ENST00000640657 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
HNRNPU-230ENST00000640657 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
HNRNPU-230ENST00000640657 ZBED9Q6R2W3 1325 aa6.61□□□□□ -1.35
HNRNPU-230ENST00000640657 KANK4Q5T7N3 995 aaPredicted RBP6.61□□□□□ -1.35
HNRNPU-230ENST00000640657 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
HNRNPU-230ENST00000640657 MS4A1P11836 297 aa6.6□□□□□ -1.35
HNRNPU-230ENST00000640657 PABPN1Q86U42 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
HNRNPU-230ENST00000640657 ARHGAP35Q9NRY4 1499 aa6.6□□□□□ -1.35
HNRNPU-230ENST00000640657 PDE3BQ13370 1112 aa6.59□□□□□ -1.36
HNRNPU-230ENST00000640657 KCNH8Q96L42 1107 aa6.59□□□□□ -1.36
HNRNPU-230ENST00000640657 RAPGEF2Q9Y4G8 1499 aa6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 HSPA5P11021 654 aaKnown RBP6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 PRKCSHP14314 528 aaPredicted RBP6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 P3H3Q8IVL6 736 aa6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 CANXP27824 592 aaKnown RBP6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 LAS1LQ9Y4W2 734 aaKnown RBP6.58□□□□□ -1.36
HNRNPU-230ENST00000640657 ZNF326Q5BKZ1 582 aaKnown RBP6.57□□□□□ -1.36
HNRNPU-230ENST00000640657 SMARCA2P51531 1590 aa6.57□□□□□ -1.36
HNRNPU-230ENST00000640657 RUSC2Q8N2Y8 1516 aa6.57□□□□□ -1.36
HNRNPU-230ENST00000640657 ARID4BQ4LE39 1312 aaPredicted RBP6.57□□□□□ -1.36
HNRNPU-230ENST00000640657 ERICH3Q5RHP9 1530 aa6.57□□□□□ -1.36
HNRNPU-230ENST00000640657 CUX2O14529 1486 aa6.56□□□□□ -1.36
HNRNPU-230ENST00000640657 ROCK2O75116 1388 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-230ENST00000640657 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
HNRNPU-230ENST00000640657 FMN1Q68DA7 1419 aa6.56□□□□□ -1.36
HNRNPU-230ENST00000640657 RTN4Q9NQC3 1192 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-230ENST00000640657 GSE1Q14687 1217 aa6.55□□□□□ -1.36
HNRNPU-230ENST00000640657 DNAJC5BQ9UF47 199 aa6.55□□□□□ -1.36
HNRNPU-230ENST00000640657 TRIM44Q96DX7 344 aaPredicted RBP6.55□□□□□ -1.36
HNRNPU-230ENST00000640657 RALBP1Q15311 655 aa6.55□□□□□ -1.36
HNRNPU-230ENST00000640657 MSH5O43196 834 aa6.54□□□□□ -1.36
HNRNPU-230ENST00000640657 PTMSP20962 102 aa6.54□□□□□ -1.36
HNRNPU-230ENST00000640657 WDR43Q15061 677 aaKnown RBP eCLIP6.54□□□□□ -1.36
HNRNPU-230ENST00000640657 CARMIL1Q5VZK9 1371 aa6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 PRKRIP1Q9H875 184 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 SLC4A1APQ9BWU0 796 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 RCAN3Q9UKA8 241 aa6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 HSP90AA1P07900 732 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 NAP1L5Q96NT1 182 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-230ENST00000640657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.52□□□□□ -1.37
HNRNPU-230ENST00000640657 PDE4AP27815 886 aa6.52□□□□□ -1.37
HNRNPU-230ENST00000640657 PHLDB1Q86UU1 1377 aa6.52□□□□□ -1.37
HNRNPU-230ENST00000640657 CNTLNQ9NXG0 1405 aa6.52□□□□□ -1.37
HNRNPU-230ENST00000640657 UNC13AQ9UPW8 1703 aa6.52□□□□□ -1.37
HNRNPU-230ENST00000640657 GOLGA6L22H0YM25 854 aa6.51□□□□□ -1.37
HNRNPU-230ENST00000640657 RRP7BPQ9NSQ0 103 aa6.51□□□□□ -1.37
HNRNPU-230ENST00000640657 CHIC2Q9UKJ5 165 aa6.51□□□□□ -1.37
HNRNPU-230ENST00000640657 PRDM2Q13029 1718 aa6.51□□□□□ -1.37
HNRNPU-230ENST00000640657 UACAQ9BZF9 1416 aa6.5□□□□□ -1.37
HNRNPU-230ENST00000640657 TNNT2P45379 298 aaPredicted RBP6.5□□□□□ -1.37
HNRNPU-230ENST00000640657 PNNQ9H307 717 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-230ENST00000640657 MAP3K1Q13233 1512 aa6.5□□□□□ -1.37
HNRNPU-230ENST00000640657 KTN1Q86UP2 1357 aaKnown RBP6.5□□□□□ -1.37
HNRNPU-230ENST00000640657 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
HNRNPU-230ENST00000640657 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
HNRNPU-230ENST00000640657 SMG6Q86US8 1419 aaKnown RBP6.49□□□□□ -1.37
HNRNPU-230ENST00000640657 FAM43AQ8N2R8 423 aa6.49□□□□□ -1.37
HNRNPU-230ENST00000640657 SLC24A1O60721 1099 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 RRP1P56182 461 aaKnown RBP6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 CCDC18Q5T9S5 1454 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 ARAP1Q96P48 1450 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 CENPQQ7L2Z9 268 aaPredicted RBP6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 CARD11Q9BXL7 1154 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 KIF15Q9NS87 1388 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 PRXQ9BXM0 1461 aa6.48□□□□□ -1.37
HNRNPU-230ENST00000640657 MPHOSPH9Q99550 1183 aa6.47□□□□□ -1.37
HNRNPU-230ENST00000640657 SALL2Q9Y467 1007 aaPredicted RBP6.47□□□□□ -1.37
HNRNPU-230ENST00000640657 CCDC7Q96M83 1385 aa6.47□□□□□ -1.37
HNRNPU-230ENST00000640657 FAM161AQ3B820 660 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms