RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 NEFMP07197 916 aa14.56□□□□□ -0.08
SMARCA2-266ENST00000639760 B4GALNT3Q6L9W6 998 aa14.54□□□□□ -0.08
SMARCA2-266ENST00000639760 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
SMARCA2-266ENST00000639760 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMARCA2-266ENST00000639760 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
SMARCA2-266ENST00000639760 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
SMARCA2-266ENST00000639760 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
SMARCA2-266ENST00000639760 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
SMARCA2-266ENST00000639760 PPM1GO15355 546 aaPredicted RBP14.46□□□□□ -0.09
SMARCA2-266ENST00000639760 GSE1Q14687 1217 aa14.46□□□□□ -0.09
SMARCA2-266ENST00000639760 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
SMARCA2-266ENST00000639760 VPS8Q8N3P4 1428 aa14.44□□□□□ -0.1
SMARCA2-266ENST00000639760 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
SMARCA2-266ENST00000639760 SOGA1O94964 1423 aa14.42□□□□□ -0.1
SMARCA2-266ENST00000639760 CLIP1P30622 1438 aa14.41□□□□□ -0.1
SMARCA2-266ENST00000639760 CUX2O14529 1486 aa14.4□□□□□ -0.1
SMARCA2-266ENST00000639760 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
SMARCA2-266ENST00000639760 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
SMARCA2-266ENST00000639760 RRP9O43818 475 aaKnown RBP14.35□□□□□ -0.11
SMARCA2-266ENST00000639760 FRAT1Q92837 279 aaPredicted RBP14.35□□□□□ -0.11
SMARCA2-266ENST00000639760 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
SMARCA2-266ENST00000639760 NCAPD3P42695 1498 aa14.33□□□□□ -0.12
SMARCA2-266ENST00000639760 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
SMARCA2-266ENST00000639760 NPM2Q86SE8 214 aaKnown RBP14.32□□□□□ -0.12
SMARCA2-266ENST00000639760 A0A0U1RQG5 324 aaPredicted RBP14.3□□□□□ -0.12
SMARCA2-266ENST00000639760 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
SMARCA2-266ENST00000639760 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
SMARCA2-266ENST00000639760 AAMPQ13685 434 aa14.28□□□□□ -0.12
SMARCA2-266ENST00000639760 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-266ENST00000639760 FGD1P98174 961 aa14.28□□□□□ -0.12
SMARCA2-266ENST00000639760 NFKBIBQ15653 356 aa14.27□□□□□ -0.13
SMARCA2-266ENST00000639760 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.13
SMARCA2-266ENST00000639760 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
SMARCA2-266ENST00000639760 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
SMARCA2-266ENST00000639760 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-266ENST00000639760 SIN3AQ96ST3 1273 aa14.25□□□□□ -0.13
SMARCA2-266ENST00000639760 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
SMARCA2-266ENST00000639760 KIF21BO75037 1637 aa14.24□□□□□ -0.13
SMARCA2-266ENST00000639760 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
SMARCA2-266ENST00000639760 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
SMARCA2-266ENST00000639760 PDE4CQ08493 712 aa14.23□□□□□ -0.13
SMARCA2-266ENST00000639760 RRAGDQ9NQL2 400 aaPredicted RBP14.22□□□□□ -0.13
SMARCA2-266ENST00000639760 WIZO95785 1651 aa14.21□□□□□ -0.13
SMARCA2-266ENST00000639760 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.13
SMARCA2-266ENST00000639760 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
SMARCA2-266ENST00000639760 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
SMARCA2-266ENST00000639760 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
SMARCA2-266ENST00000639760 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
SMARCA2-266ENST00000639760 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
SMARCA2-266ENST00000639760 PDE4AP27815 886 aa14.17□□□□□ -0.14
SMARCA2-266ENST00000639760 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
SMARCA2-266ENST00000639760 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
SMARCA2-266ENST00000639760 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
SMARCA2-266ENST00000639760 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
SMARCA2-266ENST00000639760 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
SMARCA2-266ENST00000639760 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
SMARCA2-266ENST00000639760 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
SMARCA2-266ENST00000639760 SMG6Q86US8 1419 aaKnown RBP14.13□□□□□ -0.15
SMARCA2-266ENST00000639760 MS4A1P11836 297 aa14.11□□□□□ -0.15
SMARCA2-266ENST00000639760 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
SMARCA2-266ENST00000639760 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
SMARCA2-266ENST00000639760 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
SMARCA2-266ENST00000639760 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
SMARCA2-266ENST00000639760 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
SMARCA2-266ENST00000639760 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
SMARCA2-266ENST00000639760 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.16
SMARCA2-266ENST00000639760 CLCN1P35523 988 aa14.08□□□□□ -0.16
SMARCA2-266ENST00000639760 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
SMARCA2-266ENST00000639760 NUDCQ9Y266 331 aa14.07□□□□□ -0.16
SMARCA2-266ENST00000639760 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
SMARCA2-266ENST00000639760 L1TD1Q5T7N2 865 aaKnown RBP14.06□□□□□ -0.16
SMARCA2-266ENST00000639760 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
SMARCA2-266ENST00000639760 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
SMARCA2-266ENST00000639760 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
SMARCA2-266ENST00000639760 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
SMARCA2-266ENST00000639760 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
SMARCA2-266ENST00000639760 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
SMARCA2-266ENST00000639760 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
SMARCA2-266ENST00000639760 RANGAP1P46060 587 aaPredicted RBP14□□□□□ -0.17
SMARCA2-266ENST00000639760 RGS3P49796 1198 aa14□□□□□ -0.17
SMARCA2-266ENST00000639760 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
SMARCA2-266ENST00000639760 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
SMARCA2-266ENST00000639760 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
SMARCA2-266ENST00000639760 PRKRIP1Q9H875 184 aaPredicted RBP13.98□□□□□ -0.17
SMARCA2-266ENST00000639760 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
SMARCA2-266ENST00000639760 TPM2P07951 284 aa13.96□□□□□ -0.17
SMARCA2-266ENST00000639760 POGKQ9P215 609 aa13.96□□□□□ -0.18
SMARCA2-266ENST00000639760 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
SMARCA2-266ENST00000639760 EXOC6Q8TAG9 804 aa13.92□□□□□ -0.18
SMARCA2-266ENST00000639760 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
SMARCA2-266ENST00000639760 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCA2-266ENST00000639760 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
SMARCA2-266ENST00000639760 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
SMARCA2-266ENST00000639760 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
SMARCA2-266ENST00000639760 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
SMARCA2-266ENST00000639760 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
SMARCA2-266ENST00000639760 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
SMARCA2-266ENST00000639760 ESPNB1AK53 854 aa13.84□□□□□ -0.19
SMARCA2-266ENST00000639760 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
SMARCA2-266ENST00000639760 SMAP1Q8IYB5 467 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms