RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-230ENST00000639083 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-230ENST00000639083 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
TARDBP-230ENST00000639083 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
TARDBP-230ENST00000639083 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
TARDBP-230ENST00000639083 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
TARDBP-230ENST00000639083 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
TARDBP-230ENST00000639083 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
TARDBP-230ENST00000639083 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
TARDBP-230ENST00000639083 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
TARDBP-230ENST00000639083 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
TARDBP-230ENST00000639083 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
TARDBP-230ENST00000639083 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
TARDBP-230ENST00000639083 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
TARDBP-230ENST00000639083 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
TARDBP-230ENST00000639083 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
TARDBP-230ENST00000639083 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
TARDBP-230ENST00000639083 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
TARDBP-230ENST00000639083 FMN1Q68DA7 1419 aa16.31■□□□□ 0.2
TARDBP-230ENST00000639083 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
TARDBP-230ENST00000639083 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
TARDBP-230ENST00000639083 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
TARDBP-230ENST00000639083 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
TARDBP-230ENST00000639083 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
TARDBP-230ENST00000639083 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
TARDBP-230ENST00000639083 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-230ENST00000639083 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
TARDBP-230ENST00000639083 FBLN2P98095 1184 aa16.24■□□□□ 0.19
TARDBP-230ENST00000639083 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-230ENST00000639083 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
TARDBP-230ENST00000639083 KIAA0586Q9BVV6 1533 aa16.22■□□□□ 0.19
TARDBP-230ENST00000639083 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
TARDBP-230ENST00000639083 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
TARDBP-230ENST00000639083 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
TARDBP-230ENST00000639083 UGGT2Q9NYU1 1516 aa16.17■□□□□ 0.18
TARDBP-230ENST00000639083 ITGAEP38570 1179 aa16.17■□□□□ 0.18
TARDBP-230ENST00000639083 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
TARDBP-230ENST00000639083 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
TARDBP-230ENST00000639083 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
TARDBP-230ENST00000639083 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
TARDBP-230ENST00000639083 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
TARDBP-230ENST00000639083 NUP160Q12769 1436 aa16.1■□□□□ 0.17
TARDBP-230ENST00000639083 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
TARDBP-230ENST00000639083 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
TARDBP-230ENST00000639083 ARID3CA6NKF2 412 aa16.08■□□□□ 0.17
TARDBP-230ENST00000639083 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
TARDBP-230ENST00000639083 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
TARDBP-230ENST00000639083 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
TARDBP-230ENST00000639083 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
TARDBP-230ENST00000639083 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
TARDBP-230ENST00000639083 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.16
TARDBP-230ENST00000639083 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
TARDBP-230ENST00000639083 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
TARDBP-230ENST00000639083 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
TARDBP-230ENST00000639083 CARMIL2Q6F5E8 1435 aa16.01■□□□□ 0.15
TARDBP-230ENST00000639083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■□□ 15.4
TARDBP-230ENST00000639083 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
TARDBP-230ENST00000639083 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
TARDBP-230ENST00000639083 NUP153P49790 1475 aaKnown RBP15.98■□□□□ 0.15
TARDBP-230ENST00000639083 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
TARDBP-230ENST00000639083 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
TARDBP-230ENST00000639083 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.15
TARDBP-230ENST00000639083 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
TARDBP-230ENST00000639083 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
TARDBP-230ENST00000639083 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
TARDBP-230ENST00000639083 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
TARDBP-230ENST00000639083 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
TARDBP-230ENST00000639083 CHD1O14646 1710 aa15.91■□□□□ 0.14
TARDBP-230ENST00000639083 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
TARDBP-230ENST00000639083 PTPN23Q9H3S7 1636 aa15.88■□□□□ 0.13
TARDBP-230ENST00000639083 PTPRGP23470 1445 aa15.86■□□□□ 0.13
TARDBP-230ENST00000639083 MIA2Q96PC5 1412 aa15.86■□□□□ 0.13
TARDBP-230ENST00000639083 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
TARDBP-230ENST00000639083 TROQ12816 1431 aaPredicted RBP15.84■□□□□ 0.13
TARDBP-230ENST00000639083 ABCA8O94911 1581 aa15.84■□□□□ 0.13
TARDBP-230ENST00000639083 CHIC2Q9UKJ5 165 aa15.83■□□□□ 0.12
TARDBP-230ENST00000639083 HFM1A2PYH4 1435 aa15.82■□□□□ 0.12
TARDBP-230ENST00000639083 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
TARDBP-230ENST00000639083 ATP10BO94823 1461 aa15.81■□□□□ 0.12
TARDBP-230ENST00000639083 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
TARDBP-230ENST00000639083 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
TARDBP-230ENST00000639083 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
TARDBP-230ENST00000639083 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
TARDBP-230ENST00000639083 NAIPQ13075 1403 aa15.79■□□□□ 0.12
TARDBP-230ENST00000639083 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
TARDBP-230ENST00000639083 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.12
TARDBP-230ENST00000639083 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
TARDBP-230ENST00000639083 KIF14Q15058 1648 aa15.75■□□□□ 0.11
TARDBP-230ENST00000639083 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
TARDBP-230ENST00000639083 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
TARDBP-230ENST00000639083 SIN3AQ96ST3 1273 aa15.74■□□□□ 0.11
TARDBP-230ENST00000639083 DIEXFQ68CQ4 756 aaKnown RBP15.74■□□□□ 0.11
TARDBP-230ENST00000639083 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
TARDBP-230ENST00000639083 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
TARDBP-230ENST00000639083 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
TARDBP-230ENST00000639083 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
TARDBP-230ENST00000639083 ABCC5O15440 1437 aa15.72■□□□□ 0.11
TARDBP-230ENST00000639083 DAPK1P53355 1430 aa15.72■□□□□ 0.11
TARDBP-230ENST00000639083 AKNAQ7Z591 1439 aa15.69■□□□□ 0.1
TARDBP-230ENST00000639083 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms