RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
PDE4D-229ENST00000638939 NUP160Q12769 1436 aa10.01□□□□□ -0.81
PDE4D-229ENST00000638939 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
PDE4D-229ENST00000638939 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
PDE4D-229ENST00000638939 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
PDE4D-229ENST00000638939 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
PDE4D-229ENST00000638939 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
PDE4D-229ENST00000638939 FHAD1B1AJZ9 1412 aa9.97□□□□□ -0.81
PDE4D-229ENST00000638939 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
PDE4D-229ENST00000638939 CUL7Q14999 1698 aa9.93□□□□□ -0.82
PDE4D-229ENST00000638939 PIAS4Q8N2W9 510 aaPredicted RBP9.92□□□□□ -0.82
PDE4D-229ENST00000638939 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
PDE4D-229ENST00000638939 MAPKBP1O60336 1514 aa9.87□□□□□ -0.83
PDE4D-229ENST00000638939 ADCY10Q96PN6 1610 aa9.87□□□□□ -0.83
PDE4D-229ENST00000638939 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
PDE4D-229ENST00000638939 DIP2BQ9P265 1576 aa9.85□□□□□ -0.83
PDE4D-229ENST00000638939 PRG4Q92954 1404 aaPredicted RBP9.84□□□□□ -0.83
PDE4D-229ENST00000638939 KIAA0586Q9BVV6 1533 aa9.81□□□□□ -0.84
PDE4D-229ENST00000638939 ABCC10Q5T3U5 1492 aa9.8□□□□□ -0.84
PDE4D-229ENST00000638939 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
PDE4D-229ENST00000638939 KIF27Q86VH2 1401 aa9.78□□□□□ -0.84
PDE4D-229ENST00000638939 IQGAP2Q13576 1575 aa9.77□□□□□ -0.85
PDE4D-229ENST00000638939 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
PDE4D-229ENST00000638939 KDM6BO15054 1643 aa9.77□□□□□ -0.85
PDE4D-229ENST00000638939 JPH4Q96JJ6 628 aa9.76□□□□□ -0.85
PDE4D-229ENST00000638939 PPRC1Q5VV67 1664 aaKnown RBP9.75□□□□□ -0.85
PDE4D-229ENST00000638939 CTTNBP2Q8WZ74 1663 aa9.75□□□□□ -0.85
PDE4D-229ENST00000638939 IGF1RP08069 1367 aa9.74□□□□□ -0.85
PDE4D-229ENST00000638939 GLI2P10070 1586 aa9.72□□□□□ -0.85
PDE4D-229ENST00000638939 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
PDE4D-229ENST00000638939 ABCC2Q92887 1545 aa9.71□□□□□ -0.86
PDE4D-229ENST00000638939 MAP3K4Q9Y6R4 1608 aa9.71□□□□□ -0.86
PDE4D-229ENST00000638939 UHRF1BP1LA0JNW5 1464 aa9.7□□□□□ -0.86
PDE4D-229ENST00000638939 KIAA0556O60303 1618 aa9.69□□□□□ -0.86
PDE4D-229ENST00000638939 ZCCHC11Q5TAX3 1644 aaKnown RBP9.69□□□□□ -0.86
PDE4D-229ENST00000638939 UGGT2Q9NYU1 1516 aa9.69□□□□□ -0.86
PDE4D-229ENST00000638939 CARMIL2Q6F5E8 1435 aa9.68□□□□□ -0.86
PDE4D-229ENST00000638939 DISP1Q96F81 1524 aa9.67□□□□□ -0.86
PDE4D-229ENST00000638939 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
PDE4D-229ENST00000638939 NPM1P06748 294 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDE4D-229ENST00000638939 TNIKQ9UKE5 1360 aa9.66□□□□□ -0.86
PDE4D-229ENST00000638939 FAM69CQ0P6D2 419 aa9.66□□□□□ -0.86
PDE4D-229ENST00000638939 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
PDE4D-229ENST00000638939 PTPRGP23470 1445 aa9.65□□□□□ -0.86
PDE4D-229ENST00000638939 KDM5BQ9UGL1 1544 aa9.65□□□□□ -0.86
PDE4D-229ENST00000638939 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
PDE4D-229ENST00000638939 ASXL2Q76L83 1435 aa9.64□□□□□ -0.87
PDE4D-229ENST00000638939 NPM3O75607 178 aaKnown RBP9.63□□□□□ -0.87
PDE4D-229ENST00000638939 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
PDE4D-229ENST00000638939 UACAQ9BZF9 1416 aa9.62□□□□□ -0.87
PDE4D-229ENST00000638939 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
PDE4D-229ENST00000638939 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
PDE4D-229ENST00000638939 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
PDE4D-229ENST00000638939 ABCA8O94911 1581 aa9.58□□□□□ -0.88
PDE4D-229ENST00000638939 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
PDE4D-229ENST00000638939 WDR7Q9Y4E6 1490 aa9.57□□□□□ -0.88
PDE4D-229ENST00000638939 ADGRL1O94910 1474 aa9.55□□□□□ -0.88
PDE4D-229ENST00000638939 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
PDE4D-229ENST00000638939 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
PDE4D-229ENST00000638939 MAGI3Q5TCQ9 1506 aa9.53□□□□□ -0.88
PDE4D-229ENST00000638939 KDM4FA0A1W2PPD8 638 aa9.53□□□□□ -0.88
PDE4D-229ENST00000638939 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-229ENST00000638939 KIF21BO75037 1637 aa9.51□□□□□ -0.89
PDE4D-229ENST00000638939 ABCA9Q8IUA7 1624 aa9.51□□□□□ -0.89
PDE4D-229ENST00000638939 TTBK1Q5TCY1 1321 aaPredicted RBP9.5□□□□□ -0.89
PDE4D-229ENST00000638939 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
PDE4D-229ENST00000638939 HECW2Q9P2P5 1572 aa9.49□□□□□ -0.89
PDE4D-229ENST00000638939 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.89
PDE4D-229ENST00000638939 MSH5O43196 834 aa9.46□□□□□ -0.9
PDE4D-229ENST00000638939 CD109Q6YHK3 1445 aa9.46□□□□□ -0.9
PDE4D-229ENST00000638939 FRMPD1Q5SYB0 1578 aa9.45□□□□□ -0.9
PDE4D-229ENST00000638939 CFAP74Q9C0B2 1584 aa9.45□□□□□ -0.9
PDE4D-229ENST00000638939 RICTORQ6R327 1708 aa9.43□□□□□ -0.9
PDE4D-229ENST00000638939 ADAMTSL3P82987 1691 aa9.43□□□□□ -0.9
PDE4D-229ENST00000638939 MAPK8IP2Q13387 824 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-229ENST00000638939 BCORL1Q5H9F3 1711 aa9.42□□□□□ -0.9
PDE4D-229ENST00000638939 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
PDE4D-229ENST00000638939 ATP10BO94823 1461 aa9.41□□□□□ -0.9
PDE4D-229ENST00000638939 EFCAB5A4FU69 1503 aa9.41□□□□□ -0.9
PDE4D-229ENST00000638939 NEO1Q92859 1461 aa9.4□□□□□ -0.9
PDE4D-229ENST00000638939 EEA1Q15075 1411 aa9.4□□□□□ -0.9
PDE4D-229ENST00000638939 PHLDB1Q86UU1 1377 aa9.39□□□□□ -0.91
PDE4D-229ENST00000638939 FOXD4L1Q9NU39 408 aa9.39□□□□□ -0.91
PDE4D-229ENST00000638939 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
PDE4D-229ENST00000638939 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
PDE4D-229ENST00000638939 MADDQ8WXG6 1647 aa9.37□□□□□ -0.91
PDE4D-229ENST00000638939 TTC37Q6PGP7 1564 aa9.37□□□□□ -0.91
PDE4D-229ENST00000638939 MYO5CQ9NQX4 1742 aa9.36□□□□□ -0.91
PDE4D-229ENST00000638939 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
PDE4D-229ENST00000638939 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
PDE4D-229ENST00000638939 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
PDE4D-229ENST00000638939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDE4D-229ENST00000638939 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
PDE4D-229ENST00000638939 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
PDE4D-229ENST00000638939 LRRIQ1Q96JM4 1722 aa9.33□□□□□ -0.92
PDE4D-229ENST00000638939 PTPRMP28827 1452 aa9.33□□□□□ -0.92
PDE4D-229ENST00000638939 FHOD3Q2V2M9 1422 aa9.32□□□□□ -0.92
PDE4D-229ENST00000638939 HECW1Q76N89 1606 aa9.32□□□□□ -0.92
PDE4D-229ENST00000638939 PCF11O94913 1555 aaKnown RBP9.32□□□□□ -0.92
PDE4D-229ENST00000638939 FANCAO15360 1455 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms