RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ESF1Q9H501 851 aaKnown RBP24.44■■□□□ 1.5
SCARB2-213ENST00000638680 SENP3-EIF4A1A0A087X0R7 540 aa24.43■■□□□ 1.5
SCARB2-213ENST00000638680 RRP7BPQ9NSQ0 103 aa24.41■■□□□ 1.5
SCARB2-213ENST00000638680 TRIM44Q96DX7 344 aaPredicted RBP24.41■■□□□ 1.5
SCARB2-213ENST00000638680 MYH16Q9H6N6 1097 aa24.41■■□□□ 1.5
SCARB2-213ENST00000638680 TSPY4P0CV99 314 aa24.39■■□□□ 1.49
SCARB2-213ENST00000638680 TSPY10P0CW01 314 aa24.39■■□□□ 1.49
SCARB2-213ENST00000638680 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
SCARB2-213ENST00000638680 PPM1GO15355 546 aaPredicted RBP24.3■■□□□ 1.48
SCARB2-213ENST00000638680 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
SCARB2-213ENST00000638680 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
SCARB2-213ENST00000638680 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
SCARB2-213ENST00000638680 GOLGA6L22H0YM25 854 aa24.28■■□□□ 1.48
SCARB2-213ENST00000638680 RTN4Q9NQC3 1192 aaKnown RBP24.28■■□□□ 1.48
SCARB2-213ENST00000638680 PPP4R2Q9NY27 417 aa24.28■■□□□ 1.48
SCARB2-213ENST00000638680 NCLP19338 710 aaKnown RBP24.27■■□□□ 1.48
SCARB2-213ENST00000638680 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
SCARB2-213ENST00000638680 ERICH6BQ5W0A0 696 aa24.18■■□□□ 1.46
SCARB2-213ENST00000638680 EEA1Q15075 1411 aa24.17■■□□□ 1.46
SCARB2-213ENST00000638680 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
SCARB2-213ENST00000638680 PTMAP06454 111 aaKnown RBP24.15■■□□□ 1.46
SCARB2-213ENST00000638680 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
SCARB2-213ENST00000638680 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
SCARB2-213ENST00000638680 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.46
SCARB2-213ENST00000638680 NAP1L5Q96NT1 182 aaPredicted RBP24.14■■□□□ 1.45
SCARB2-213ENST00000638680 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
SCARB2-213ENST00000638680 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
SCARB2-213ENST00000638680 RGS3P49796 1198 aa24.12■■□□□ 1.45
SCARB2-213ENST00000638680 KNSTRNQ9Y448 316 aa24.11■■□□□ 1.45
SCARB2-213ENST00000638680 CARD11Q9BXL7 1154 aa24.1■■□□□ 1.45
SCARB2-213ENST00000638680 FTSJ3Q8IY81 847 aaKnown RBP24.09■■□□□ 1.45
SCARB2-213ENST00000638680 TNIKQ9UKE5 1360 aa24.08■■□□□ 1.45
SCARB2-213ENST00000638680 DNTTIP2Q5QJE6 756 aaKnown RBP24.08■■□□□ 1.45
SCARB2-213ENST00000638680 TNNT2P45379 298 aaPredicted RBP24.08■■□□□ 1.44
SCARB2-213ENST00000638680 TPRNQ4KMQ1 711 aa24.07■■□□□ 1.44
SCARB2-213ENST00000638680 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
SCARB2-213ENST00000638680 CASC1Q6TDU7 716 aa24.04■■□□□ 1.44
SCARB2-213ENST00000638680 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
SCARB2-213ENST00000638680 CDCA8Q53HL2 280 aa24.01■■□□□ 1.43
SCARB2-213ENST00000638680 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
SCARB2-213ENST00000638680 DEKP35659 375 aaKnown RBP24.01■■□□□ 1.43
SCARB2-213ENST00000638680 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
SCARB2-213ENST00000638680 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
SCARB2-213ENST00000638680 CDK11BP21127 795 aaKnown RBP23.99■■□□□ 1.43
SCARB2-213ENST00000638680 FRAT1Q92837 279 aaPredicted RBP23.99■■□□□ 1.43
SCARB2-213ENST00000638680 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
SCARB2-213ENST00000638680 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
SCARB2-213ENST00000638680 ZRSR1Q15695 479 aaKnown RBP23.94■■□□□ 1.42
SCARB2-213ENST00000638680 CC2D1BQ5T0F9 858 aaKnown RBP23.94■■□□□ 1.42
SCARB2-213ENST00000638680 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
SCARB2-213ENST00000638680 PLEKHD1A6NEE1 506 aa23.93■■□□□ 1.42
SCARB2-213ENST00000638680 PLEKHG5O94827 1062 aa23.92■■□□□ 1.42
SCARB2-213ENST00000638680 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
SCARB2-213ENST00000638680 C14orf37Q86TY3 774 aa23.92■■□□□ 1.42
SCARB2-213ENST00000638680 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
SCARB2-213ENST00000638680 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
SCARB2-213ENST00000638680 MAPK8IP3Q9UPT6 1336 aa23.89■■□□□ 1.42
SCARB2-213ENST00000638680 PLCB2Q00722 1185 aa23.88■■□□□ 1.41
SCARB2-213ENST00000638680 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
SCARB2-213ENST00000638680 A0A0G2JS52 829 aa23.84■■□□□ 1.41
SCARB2-213ENST00000638680 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
SCARB2-213ENST00000638680 KIF27Q86VH2 1401 aa23.83■■□□□ 1.4
SCARB2-213ENST00000638680 NUDCQ9Y266 331 aa23.81■■□□□ 1.4
SCARB2-213ENST00000638680 HSCBQ8IWL3 235 aa23.79■■□□□ 1.4
SCARB2-213ENST00000638680 L1TD1Q5T7N2 865 aaKnown RBP23.79■■□□□ 1.4
SCARB2-213ENST00000638680 SPRYD3Q8NCJ5 442 aa23.78■■□□□ 1.4
SCARB2-213ENST00000638680 MS4A1P11836 297 aa23.76■■□□□ 1.39
SCARB2-213ENST00000638680 CHMP4BQ9H444 224 aaKnown RBP23.74■■□□□ 1.39
SCARB2-213ENST00000638680 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
SCARB2-213ENST00000638680 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
SCARB2-213ENST00000638680 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
SCARB2-213ENST00000638680 TSHZ2Q9NRE2 1034 aa23.72■■□□□ 1.39
SCARB2-213ENST00000638680 MSNP26038 577 aaKnown RBP23.7■■□□□ 1.39
SCARB2-213ENST00000638680 TMF1P82094 1093 aa23.7■■□□□ 1.38
SCARB2-213ENST00000638680 DCAF11Q8TEB1 546 aa23.69■■□□□ 1.38
SCARB2-213ENST00000638680 GOLGA6L6A8MZA4 724 aa23.68■■□□□ 1.38
SCARB2-213ENST00000638680 TAOK2Q9UL54 1235 aa23.68■■□□□ 1.38
SCARB2-213ENST00000638680 SETD5Q9C0A6 1442 aa23.66■■□□□ 1.38
SCARB2-213ENST00000638680 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
SCARB2-213ENST00000638680 OS9Q13438 667 aaPredicted RBP23.64■■□□□ 1.38
SCARB2-213ENST00000638680 POGKQ9P215 609 aa23.64■■□□□ 1.38
SCARB2-213ENST00000638680 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
SCARB2-213ENST00000638680 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
SCARB2-213ENST00000638680 CHAF1AQ13111 956 aaPredicted RBP23.62■■□□□ 1.37
SCARB2-213ENST00000638680 FGD1P98174 961 aa23.62■■□□□ 1.37
SCARB2-213ENST00000638680 KCNJ4P48050 445 aa23.61■■□□□ 1.37
SCARB2-213ENST00000638680 SOGA1O94964 1423 aa23.6■■□□□ 1.37
SCARB2-213ENST00000638680 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
SCARB2-213ENST00000638680 PNNQ9H307 717 aaKnown RBP23.59■■□□□ 1.37
SCARB2-213ENST00000638680 GOLGA6L4A6NEF3 574 aa23.58■■□□□ 1.37
SCARB2-213ENST00000638680 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.37
SCARB2-213ENST00000638680 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
SCARB2-213ENST00000638680 TCERG1O14776 1098 aaKnown RBP23.56■■□□□ 1.36
SCARB2-213ENST00000638680 NRDCO43847 1150 aa23.56■■□□□ 1.36
SCARB2-213ENST00000638680 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
SCARB2-213ENST00000638680 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
SCARB2-213ENST00000638680 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.54■■□□□ 1.36
SCARB2-213ENST00000638680 SLKQ9H2G2 1235 aaPredicted RBP23.54■■□□□ 1.36
SCARB2-213ENST00000638680 MORC1Q86VD1 984 aa23.53■■□□□ 1.36
SCARB2-213ENST00000638680 MCCP23508 829 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms