RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
HCG27-205ENST00000638546 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
HCG27-205ENST00000638546 CTTNBP2Q8WZ74 1663 aa25.37■■□□□ 1.65
HCG27-205ENST00000638546 EFCAB5A4FU69 1503 aa25.37■■□□□ 1.65
HCG27-205ENST00000638546 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
HCG27-205ENST00000638546 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
HCG27-205ENST00000638546 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
HCG27-205ENST00000638546 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
HCG27-205ENST00000638546 KANK4Q5T7N3 995 aaPredicted RBP25.29■■□□□ 1.64
HCG27-205ENST00000638546 MAP3K1Q13233 1512 aa25.26■■□□□ 1.63
HCG27-205ENST00000638546 FHOD3Q2V2M9 1422 aa25.26■■□□□ 1.63
HCG27-205ENST00000638546 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
HCG27-205ENST00000638546 SNAPC4Q5SXM2 1469 aa25.2■■□□□ 1.63
HCG27-205ENST00000638546 SAMD9Q5K651 1589 aa25.19■■□□□ 1.62
HCG27-205ENST00000638546 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
HCG27-205ENST00000638546 CASKIN1Q8WXD9 1431 aa25.17■■□□□ 1.62
HCG27-205ENST00000638546 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
HCG27-205ENST00000638546 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
HCG27-205ENST00000638546 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
HCG27-205ENST00000638546 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
HCG27-205ENST00000638546 IQGAP2Q13576 1575 aa25.12■■□□□ 1.61
HCG27-205ENST00000638546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
HCG27-205ENST00000638546 ATP1B4Q9UN42 357 aaPredicted RBP25.11■■□□□ 1.61
HCG27-205ENST00000638546 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
HCG27-205ENST00000638546 LRRC9Q6ZRR7 1453 aa25.09■■□□□ 1.61
HCG27-205ENST00000638546 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
HCG27-205ENST00000638546 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
HCG27-205ENST00000638546 KIAA0586Q9BVV6 1533 aa25.07■■□□□ 1.6
HCG27-205ENST00000638546 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
HCG27-205ENST00000638546 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
HCG27-205ENST00000638546 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
HCG27-205ENST00000638546 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
HCG27-205ENST00000638546 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
HCG27-205ENST00000638546 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
HCG27-205ENST00000638546 FBLN2P98095 1184 aa24.94■■□□□ 1.58
HCG27-205ENST00000638546 NUP160Q12769 1436 aa24.9■■□□□ 1.58
HCG27-205ENST00000638546 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
HCG27-205ENST00000638546 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.57
HCG27-205ENST00000638546 DISP1Q96F81 1524 aa24.89■■□□□ 1.57
HCG27-205ENST00000638546 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
HCG27-205ENST00000638546 KIAA0556O60303 1618 aa24.85■■□□□ 1.57
HCG27-205ENST00000638546 CCDC18Q5T9S5 1454 aa24.85■■□□□ 1.57
HCG27-205ENST00000638546 HECW1Q76N89 1606 aa24.83■■□□□ 1.57
HCG27-205ENST00000638546 JPH4Q96JJ6 628 aa24.8■■□□□ 1.56
HCG27-205ENST00000638546 LRRIQ1Q96JM4 1722 aa24.79■■□□□ 1.56
HCG27-205ENST00000638546 CARMIL2Q6F5E8 1435 aa24.77■■□□□ 1.56
HCG27-205ENST00000638546 EPRSP07814 1512 aaKnown RBP24.76■■□□□ 1.55
HCG27-205ENST00000638546 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
HCG27-205ENST00000638546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
HCG27-205ENST00000638546 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
HCG27-205ENST00000638546 ITGAEP38570 1179 aa24.73■■□□□ 1.55
HCG27-205ENST00000638546 CHD1O14646 1710 aa24.72■■□□□ 1.55
HCG27-205ENST00000638546 NCOA2Q15596 1464 aa24.71■■□□□ 1.55
HCG27-205ENST00000638546 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
HCG27-205ENST00000638546 SUPT6HQ7KZ85 1726 aaKnown RBP24.68■■□□□ 1.54
HCG27-205ENST00000638546 MAGI3Q5TCQ9 1506 aa24.67■■□□□ 1.54
HCG27-205ENST00000638546 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
HCG27-205ENST00000638546 RAPGEF6Q8TEU7 1601 aa24.66■■□□□ 1.54
HCG27-205ENST00000638546 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
HCG27-205ENST00000638546 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
HCG27-205ENST00000638546 NUP153P49790 1475 aaKnown RBP24.64■■□□□ 1.54
HCG27-205ENST00000638546 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
HCG27-205ENST00000638546 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
HCG27-205ENST00000638546 DHX57Q6P158 1386 aaKnown RBP24.6■■□□□ 1.53
HCG27-205ENST00000638546 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
HCG27-205ENST00000638546 SETD5Q9C0A6 1442 aa24.58■■□□□ 1.53
HCG27-205ENST00000638546 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
HCG27-205ENST00000638546 PLB1Q6P1J6 1458 aa24.57■■□□□ 1.52
HCG27-205ENST00000638546 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
HCG27-205ENST00000638546 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
HCG27-205ENST00000638546 ABCA8O94911 1581 aa24.5■■□□□ 1.51
HCG27-205ENST00000638546 MIA2Q96PC5 1412 aa24.49■■□□□ 1.51
HCG27-205ENST00000638546 TCOF1Q13428 1488 aaKnown RBP24.49■■□□□ 1.51
HCG27-205ENST00000638546 PTPRGP23470 1445 aa24.49■■□□□ 1.51
HCG27-205ENST00000638546 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
HCG27-205ENST00000638546 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
HCG27-205ENST00000638546 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
HCG27-205ENST00000638546 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
HCG27-205ENST00000638546 PTPRKQ15262 1439 aa24.42■■□□□ 1.5
HCG27-205ENST00000638546 ATP10BO94823 1461 aa24.4■■□□□ 1.5
HCG27-205ENST00000638546 PLEKHD1A6NEE1 506 aa24.38■■□□□ 1.49
HCG27-205ENST00000638546 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
HCG27-205ENST00000638546 UACAQ9BZF9 1416 aa24.33■■□□□ 1.49
HCG27-205ENST00000638546 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
HCG27-205ENST00000638546 NAIPQ13075 1403 aa24.3■■□□□ 1.48
HCG27-205ENST00000638546 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
HCG27-205ENST00000638546 GPATCH8Q9UKJ3 1502 aaKnown RBP24.28■■□□□ 1.48
HCG27-205ENST00000638546 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
HCG27-205ENST00000638546 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
HCG27-205ENST00000638546 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
HCG27-205ENST00000638546 KIF14Q15058 1648 aa24.26■■□□□ 1.47
HCG27-205ENST00000638546 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
HCG27-205ENST00000638546 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
HCG27-205ENST00000638546 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
HCG27-205ENST00000638546 DAPK1P53355 1430 aa24.23■■□□□ 1.47
HCG27-205ENST00000638546 ITSN2Q9NZM3 1697 aa24.22■■□□□ 1.47
HCG27-205ENST00000638546 RRP7BPQ9NSQ0 103 aa24.22■■□□□ 1.47
HCG27-205ENST00000638546 ABCC5O15440 1437 aa24.21■■□□□ 1.47
HCG27-205ENST00000638546 ABCC10Q5T3U5 1492 aa24.21■■□□□ 1.47
HCG27-205ENST00000638546 ABCC2Q92887 1545 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms