RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
UBE3A-228ENST00000638155 CALRP27797 417 aaKnown RBP17.18■□□□□ 0.34
UBE3A-228ENST00000638155 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
UBE3A-228ENST00000638155 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
UBE3A-228ENST00000638155 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
UBE3A-228ENST00000638155 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
UBE3A-228ENST00000638155 CLSTN1O94985 981 aa17.12■□□□□ 0.33
UBE3A-228ENST00000638155 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
UBE3A-228ENST00000638155 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE3A-228ENST00000638155 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
UBE3A-228ENST00000638155 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
UBE3A-228ENST00000638155 CHGAP10645 457 aaKnown RBP17.04■□□□□ 0.32
UBE3A-228ENST00000638155 GOLGA6L1Q8N7Z2 621 aa17.02■□□□□ 0.32
UBE3A-228ENST00000638155 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
UBE3A-228ENST00000638155 PRM3Q9NNZ6 103 aa17.01■□□□□ 0.31
UBE3A-228ENST00000638155 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
UBE3A-228ENST00000638155 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
UBE3A-228ENST00000638155 GOLGA6L4A6NEF3 574 aa17■□□□□ 0.31
UBE3A-228ENST00000638155 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
UBE3A-228ENST00000638155 FGD1P98174 961 aa17■□□□□ 0.31
UBE3A-228ENST00000638155 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
UBE3A-228ENST00000638155 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
UBE3A-228ENST00000638155 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
UBE3A-228ENST00000638155 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
UBE3A-228ENST00000638155 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
UBE3A-228ENST00000638155 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
UBE3A-228ENST00000638155 NPHP1O15259 732 aa16.98■□□□□ 0.31
UBE3A-228ENST00000638155 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
UBE3A-228ENST00000638155 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
UBE3A-228ENST00000638155 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
UBE3A-228ENST00000638155 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
UBE3A-228ENST00000638155 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
UBE3A-228ENST00000638155 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
UBE3A-228ENST00000638155 ARID3AQ99856 593 aa16.92■□□□□ 0.3
UBE3A-228ENST00000638155 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
UBE3A-228ENST00000638155 KCNJ4P48050 445 aa16.89■□□□□ 0.29
UBE3A-228ENST00000638155 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
UBE3A-228ENST00000638155 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
UBE3A-228ENST00000638155 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
UBE3A-228ENST00000638155 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
UBE3A-228ENST00000638155 PTMSP20962 102 aa16.82■□□□□ 0.28
UBE3A-228ENST00000638155 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
UBE3A-228ENST00000638155 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
UBE3A-228ENST00000638155 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
UBE3A-228ENST00000638155 MCCP23508 829 aa16.8■□□□□ 0.28
UBE3A-228ENST00000638155 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
UBE3A-228ENST00000638155 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
UBE3A-228ENST00000638155 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
UBE3A-228ENST00000638155 TPM4P67936 248 aa16.75■□□□□ 0.27
UBE3A-228ENST00000638155 RGS3P49796 1198 aa16.74■□□□□ 0.27
UBE3A-228ENST00000638155 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
UBE3A-228ENST00000638155 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
UBE3A-228ENST00000638155 PDE4CQ08493 712 aa16.7■□□□□ 0.26
UBE3A-228ENST00000638155 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
UBE3A-228ENST00000638155 ISY1Q9ULR0 285 aaKnown RBP16.7■□□□□ 0.26
UBE3A-228ENST00000638155 GBP4Q96PP9 640 aa16.69■□□□□ 0.26
UBE3A-228ENST00000638155 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
UBE3A-228ENST00000638155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.269e-8■■■□□ 14.6
UBE3A-228ENST00000638155 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
UBE3A-228ENST00000638155 MS4A1P11836 297 aa16.67■□□□□ 0.26
UBE3A-228ENST00000638155 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
UBE3A-228ENST00000638155 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
UBE3A-228ENST00000638155 PATL2C9JE40 543 aaKnown RBP16.67■□□□□ 0.26
UBE3A-228ENST00000638155 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
UBE3A-228ENST00000638155 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
UBE3A-228ENST00000638155 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
UBE3A-228ENST00000638155 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
UBE3A-228ENST00000638155 MAPK8IP3Q9UPT6 1336 aa16.64■□□□□ 0.25
UBE3A-228ENST00000638155 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBE3A-228ENST00000638155 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
UBE3A-228ENST00000638155 TPM3P06753 285 aa16.62■□□□□ 0.25
UBE3A-228ENST00000638155 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
UBE3A-228ENST00000638155 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
UBE3A-228ENST00000638155 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
UBE3A-228ENST00000638155 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBE3A-228ENST00000638155 GPS2Q13227 327 aa16.59■□□□□ 0.25
UBE3A-228ENST00000638155 MIER1Q8N108 512 aa16.59■□□□□ 0.25
UBE3A-228ENST00000638155 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
UBE3A-228ENST00000638155 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
UBE3A-228ENST00000638155 PHF14O94880 888 aa16.58■□□□□ 0.24
UBE3A-228ENST00000638155 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
UBE3A-228ENST00000638155 GZF1Q9H116 711 aaPredicted RBP16.57■□□□□ 0.24
UBE3A-228ENST00000638155 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
UBE3A-228ENST00000638155 ZNF771Q7L3S4 317 aaPredicted RBP16.55■□□□□ 0.24
UBE3A-228ENST00000638155 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
UBE3A-228ENST00000638155 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
UBE3A-228ENST00000638155 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
UBE3A-228ENST00000638155 GOLGA6L3A6NEY3 463 aa16.54■□□□□ 0.24
UBE3A-228ENST00000638155 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
UBE3A-228ENST00000638155 APPP05067 770 aa16.54■□□□□ 0.24
UBE3A-228ENST00000638155 ABCC9O60706 1549 aa16.52■□□□□ 0.23
UBE3A-228ENST00000638155 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
UBE3A-228ENST00000638155 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
UBE3A-228ENST00000638155 TEX35Q5T0J7 233 aa16.51■□□□□ 0.23
UBE3A-228ENST00000638155 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
UBE3A-228ENST00000638155 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
UBE3A-228ENST00000638155 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
UBE3A-228ENST00000638155 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
UBE3A-228ENST00000638155 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
UBE3A-228ENST00000638155 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms