RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 PELP1Q8IZL8 1130 aaKnown RBP0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 SLAIN1Q8ND83 568 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 KRTAP9-9Q9BYP9 154 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 KRTAP9-4Q9BYQ2 154 aa0.99□□□□□ -2.25
SYNGAP1-225ENST00000637911 GALR2O43603 387 aaPredicted RBP0.98□□□□□ -2.25
SYNGAP1-225ENST00000637911 TRAF7Q6Q0C0 670 aa0.98□□□□□ -2.25
SYNGAP1-225ENST00000637911 FAM205CA6NFA0 338 aa0.97□□□□□ -2.25
SYNGAP1-225ENST00000637911 ZNF579Q8NAF0 562 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-225ENST00000637911 HS3ST6Q96QI5 342 aa0.97□□□□□ -2.25
SYNGAP1-225ENST00000637911 CLEC11AQ9Y240 323 aa0.97□□□□□ -2.25
SYNGAP1-225ENST00000637911 PTGER2P43116 358 aa0.96□□□□□ -2.26
SYNGAP1-225ENST00000637911 CHADLQ6NUI6 762 aa0.96□□□□□ -2.26
SYNGAP1-225ENST00000637911 KRTAP4-2Q9BYR5 136 aa0.96□□□□□ -2.26
SYNGAP1-225ENST00000637911 ZRANB1Q9UGI0 708 aa0.96□□□□□ -2.26
SYNGAP1-225ENST00000637911 ATF5Q9Y2D1 282 aaPredicted RBP0.95□□□□□ -2.26
SYNGAP1-225ENST00000637911 INSM1Q01101 510 aaPredicted RBP0.94□□□□□ -2.26
SYNGAP1-225ENST00000637911 LAPTM4AQ15012 233 aa0.94□□□□□ -2.26
SYNGAP1-225ENST00000637911 LCE1DQ5T752 114 aa0.94□□□□□ -2.26
SYNGAP1-225ENST00000637911 HCSTQ9UBK5 93 aa0.94□□□□□ -2.26
SYNGAP1-225ENST00000637911 FAM181BA6NEQ2 426 aa0.93□□□□□ -2.26
SYNGAP1-225ENST00000637911 SEC24BO95487 1268 aa0.93□□□□□ -2.26
SYNGAP1-225ENST00000637911 POLA2Q14181 598 aa0.93□□□□□ -2.26
SYNGAP1-225ENST00000637911 SPDYE1Q8NFV5 336 aaPredicted RBP0.93□□□□□ -2.26
SYNGAP1-225ENST00000637911 KRTAP4-9Q9BYQ8 210 aa0.93□□□□□ -2.26
SYNGAP1-225ENST00000637911 POTEB3A0JP26 581 aa0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 ATMINO43313 823 aaPredicted RBP0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 LAMC2Q13753 1193 aa0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 ASTLQ6HA08 431 aaPredicted RBP0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 POTEBQ6S5H4 581 aa0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 TREML4Q6UXN2 200 aa0.92□□□□□ -2.26
SYNGAP1-225ENST00000637911 COBLO75128 1261 aa0.91□□□□□ -2.26
SYNGAP1-225ENST00000637911 CNKSR2Q8WXI2 1034 aa0.91□□□□□ -2.26
SYNGAP1-225ENST00000637911 KRTAP4-12Q9BQ66 201 aa0.91□□□□□ -2.26
SYNGAP1-225ENST00000637911 OSCARQ8IYS5 282 aa0.9□□□□□ -2.27
SYNGAP1-225ENST00000637911 ZBTB12Q9Y330 459 aaPredicted RBP0.9□□□□□ -2.27
SYNGAP1-225ENST00000637911 FARP1Q9Y4F1 1045 aaPredicted RBP0.9□□□□□ -2.27
SYNGAP1-225ENST00000637911 LCE2BO14633 110 aa0.89□□□□□ -2.27
SYNGAP1-225ENST00000637911 GFRA3O60609 400 aa0.89□□□□□ -2.27
SYNGAP1-225ENST00000637911 RGS19P49795 217 aa0.89□□□□□ -2.27
SYNGAP1-225ENST00000637911 KRTAP4-5Q9BYR2 181 aa0.89□□□□□ -2.27
SYNGAP1-225ENST00000637911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 PAK3O75914 559 aaPredicted RBP0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 PRR29P0C7W0 189 aa0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 HNRNPUL2Q1KMD3 747 aaKnown RBP0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 ANKRD13DQ6ZTN6 518 aa0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 KCTD17Q8N5Z5 321 aa0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 ERBB3P21860 1342 aa0.88□□□□□ -2.27
SYNGAP1-225ENST00000637911 POTEFA5A3E0 1075 aa0.87□□□□□ -2.27
SYNGAP1-225ENST00000637911 WFS1O76024 890 aa0.87□□□□□ -2.27
SYNGAP1-225ENST00000637911 PHF12Q96QT6 1004 aa0.87□□□□□ -2.27
SYNGAP1-225ENST00000637911 A0A0G2JS52 829 aa0.86□□□□□ -2.27
SYNGAP1-225ENST00000637911 ATN1P54259 1190 aaPredicted RBP0.86□□□□□ -2.27
SYNGAP1-225ENST00000637911 KRTAP4-11Q9BYQ6 195 aa0.86□□□□□ -2.27
SYNGAP1-225ENST00000637911 GOLGA2P5Q9HBQ8 144 aa0.86□□□□□ -2.27
SYNGAP1-225ENST00000637911 WIPF1O43516 503 aa0.85□□□□□ -2.27
SYNGAP1-225ENST00000637911 LORP23490 312 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-225ENST00000637911 LCE2AQ5TA79 106 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-225ENST00000637911 EIF2AK3Q9NZJ5 1116 aaKnown RBP0.85□□□□□ -2.27
SYNGAP1-225ENST00000637911 COLQQ9Y215 455 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-225ENST00000637911 SAMD1Q6SPF0 538 aaPredicted RBP0.84□□□□□ -2.27
SYNGAP1-225ENST00000637911 NRG2O14511 850 aaPredicted RBP0.83□□□□□ -2.28
SYNGAP1-225ENST00000637911 IFFO2Q5TF58 517 aa0.83□□□□□ -2.28
SYNGAP1-225ENST00000637911 Q8N3U1 123 aa0.83□□□□□ -2.28
SYNGAP1-225ENST00000637911 TMEM151AQ8N4L1 468 aa0.83□□□□□ -2.28
SYNGAP1-225ENST00000637911 MS4A3Q96HJ5 214 aa0.83□□□□□ -2.28
SYNGAP1-225ENST00000637911 VARS2Q5ST30 1063 aaKnown RBP0.82□□□□□ -2.28
SYNGAP1-225ENST00000637911 KRTAP19-1Q8IUB9 90 aa0.82□□□□□ -2.28
SYNGAP1-225ENST00000637911 KRTAP1-1Q07627 177 aa0.81□□□□□ -2.28
SYNGAP1-225ENST00000637911 LSRQ86X29 649 aaPredicted RBP0.81□□□□□ -2.28
SYNGAP1-225ENST00000637911 ZNF687Q8N1G0 1237 aa0.81□□□□□ -2.28
SYNGAP1-225ENST00000637911 ARID1BQ8NFD5 2236 aaPredicted RBP0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 SPDYE2BA6NHP3 402 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 GDF11O95390 407 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 IGHA1P01876 353 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 SPDYE6P0CI01 402 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 PLCG2P16885 1265 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 SPDYE2Q495Y8 402 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 GPAT2Q6NUI2 795 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 PPP4R3CPQ6ZMV5 832 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 ZNF710Q8N1W2 664 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 ZSCAN1Q8NBB4 408 aa0.8□□□□□ -2.28
SYNGAP1-225ENST00000637911 POTECB2RU33 542 aa0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 ADAM23O75077 832 aa0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 YBX3P16989 372 aaKnown RBP eCLIP0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 LSM11P83369 360 aaKnown RBP eCLIP0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 KCNMA1Q12791 1236 aa0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 IER5LQ5T953 404 aa0.79□□□□□ -2.28
SYNGAP1-225ENST00000637911 HOXB1P14653 301 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-225ENST00000637911 FZD5Q13467 585 aa0.78□□□□□ -2.28
SYNGAP1-225ENST00000637911 KCTD12Q96CX2 325 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-225ENST00000637911 BMP2KQ9NSY1 1161 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-225ENST00000637911 PTPN5P54829 565 aa0.77□□□□□ -2.29
SYNGAP1-225ENST00000637911 RASSF7Q02833 373 aa0.77□□□□□ -2.29
SYNGAP1-225ENST00000637911 NFX1Q12986 1120 aaKnown RBP0.77□□□□□ -2.29
SYNGAP1-225ENST00000637911 C3orf67Q6ZVT6 689 aa0.77□□□□□ -2.29
SYNGAP1-225ENST00000637911 STAC3Q96MF2 364 aa0.77□□□□□ -2.29
SYNGAP1-225ENST00000637911 PSPNO60542 156 aa0.76□□□□□ -2.29
SYNGAP1-225ENST00000637911 TIE1P35590 1138 aa0.76□□□□□ -2.29
SYNGAP1-225ENST00000637911 WDR26Q9H7D7 661 aa0.76□□□□□ -2.29
SYNGAP1-225ENST00000637911 PDZRN3Q9UPQ7 1066 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms