RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
SMARCA2-263ENST00000637806 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
SMARCA2-263ENST00000637806 PIP4K2BP78356 416 aa13.4□□□□□ -0.27
SMARCA2-263ENST00000637806 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
SMARCA2-263ENST00000637806 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SMARCA2-263ENST00000637806 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
SMARCA2-263ENST00000637806 CUX2O14529 1486 aa13.36□□□□□ -0.27
SMARCA2-263ENST00000637806 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
SMARCA2-263ENST00000637806 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
SMARCA2-263ENST00000637806 RGL3Q3MIN7 710 aa13.31□□□□□ -0.28
SMARCA2-263ENST00000637806 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
SMARCA2-263ENST00000637806 POGKQ9P215 609 aa13.31□□□□□ -0.28
SMARCA2-263ENST00000637806 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
SMARCA2-263ENST00000637806 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
SMARCA2-263ENST00000637806 FOXD1Q16676 465 aa13.27□□□□□ -0.28
SMARCA2-263ENST00000637806 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.28
SMARCA2-263ENST00000637806 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
SMARCA2-263ENST00000637806 SOX12O15370 315 aa13.26□□□□□ -0.29
SMARCA2-263ENST00000637806 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
SMARCA2-263ENST00000637806 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
SMARCA2-263ENST00000637806 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
SMARCA2-263ENST00000637806 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
SMARCA2-263ENST00000637806 KANK1Q14678 1352 aa13.21□□□□□ -0.29
SMARCA2-263ENST00000637806 PTPRGP23470 1445 aa13.21□□□□□ -0.29
SMARCA2-263ENST00000637806 NESP48681 1621 aa13.21□□□□□ -0.3
SMARCA2-263ENST00000637806 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
SMARCA2-263ENST00000637806 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
SMARCA2-263ENST00000637806 MSH5O43196 834 aa13.19□□□□□ -0.3
SMARCA2-263ENST00000637806 CLIP1P30622 1438 aa13.19□□□□□ -0.3
SMARCA2-263ENST00000637806 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMARCA2-263ENST00000637806 KIF3BO15066 747 aa13.18□□□□□ -0.3
SMARCA2-263ENST00000637806 STK26Q9P289 416 aa13.18□□□□□ -0.3
SMARCA2-263ENST00000637806 PPM1GO15355 546 aaPredicted RBP13.18□□□□□ -0.3
SMARCA2-263ENST00000637806 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.31e-10■■■■■ 53.5
SMARCA2-263ENST00000637806 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-263ENST00000637806 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-263ENST00000637806 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-263ENST00000637806 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
SMARCA2-263ENST00000637806 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-263ENST00000637806 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-263ENST00000637806 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
SMARCA2-263ENST00000637806 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-263ENST00000637806 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
SMARCA2-263ENST00000637806 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
SMARCA2-263ENST00000637806 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
SMARCA2-263ENST00000637806 EVA1CP58658 441 aa13.1□□□□□ -0.31
SMARCA2-263ENST00000637806 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-263ENST00000637806 ATF3P18847 181 aa13.09□□□□□ -0.31
SMARCA2-263ENST00000637806 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
SMARCA2-263ENST00000637806 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-263ENST00000637806 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCA2-263ENST00000637806 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
SMARCA2-263ENST00000637806 NEFLP07196 543 aa13.05□□□□□ -0.32
SMARCA2-263ENST00000637806 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.33
SMARCA2-263ENST00000637806 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
SMARCA2-263ENST00000637806 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-263ENST00000637806 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-263ENST00000637806 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
SMARCA2-263ENST00000637806 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 WIZO95785 1651 aa12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
SMARCA2-263ENST00000637806 CENPBP07199 599 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-263ENST00000637806 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-263ENST00000637806 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-263ENST00000637806 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
SMARCA2-263ENST00000637806 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-263ENST00000637806 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-263ENST00000637806 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-263ENST00000637806 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-263ENST00000637806 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
SMARCA2-263ENST00000637806 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
SMARCA2-263ENST00000637806 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
SMARCA2-263ENST00000637806 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-263ENST00000637806 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
SMARCA2-263ENST00000637806 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
SMARCA2-263ENST00000637806 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
SMARCA2-263ENST00000637806 PSME1Q06323 249 aa12.88□□□□□ -0.35
SMARCA2-263ENST00000637806 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
SMARCA2-263ENST00000637806 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-263ENST00000637806 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
SMARCA2-263ENST00000637806 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
SMARCA2-263ENST00000637806 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
SMARCA2-263ENST00000637806 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
SMARCA2-263ENST00000637806 FGD5Q6ZNL6 1462 aa12.86□□□□□ -0.35
SMARCA2-263ENST00000637806 TOM1O60784 492 aa12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 G3V3G9 751 aa12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 HSPA2P54652 639 aa12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-263ENST00000637806 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
SMARCA2-263ENST00000637806 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
SMARCA2-263ENST00000637806 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-263ENST00000637806 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
SMARCA2-263ENST00000637806 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
SMARCA2-263ENST00000637806 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms